RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 ADORA1P30542 326 aa11.73□□□□□ -0.53
TTC1-201ENST00000231238 RBM25P49756 843 aaKnown RBP11.73□□□□□ -0.53
TTC1-201ENST00000231238 EZH2Q15910 746 aaKnown RBP11.73□□□□□ -0.53
TTC1-201ENST00000231238 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
TTC1-201ENST00000231238 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
TTC1-201ENST00000231238 TAF5LO75529 589 aa11.72□□□□□ -0.53
TTC1-201ENST00000231238 UQCRFS1P1P0C7P4 283 aa11.72□□□□□ -0.53
TTC1-201ENST00000231238 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
TTC1-201ENST00000231238 CHRNDQ07001 517 aa11.72□□□□□ -0.53
TTC1-201ENST00000231238 PRR5LQ6MZQ0 368 aa11.72□□□□□ -0.53
TTC1-201ENST00000231238 VPS37DQ86XT2 251 aa11.72□□□□□ -0.53
TTC1-201ENST00000231238 COL23A1Q86Y22 540 aaPredicted RBP11.72□□□□□ -0.53
TTC1-201ENST00000231238 HSCBQ8IWL3 235 aa11.72□□□□□ -0.53
TTC1-201ENST00000231238 USP26Q9BXU7 913 aa11.72□□□□□ -0.53
TTC1-201ENST00000231238 BSDC1Q9NW68 430 aaPredicted RBP11.72□□□□□ -0.53
TTC1-201ENST00000231238 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
TTC1-201ENST00000231238 LAMB2P55268 1798 aa11.72□□□□□ -0.53
TTC1-201ENST00000231238 UBR3Q6ZT12 1888 aa11.71□□□□□ -0.53
TTC1-201ENST00000231238 AK9Q5TCS8 1911 aa11.71□□□□□ -0.53
TTC1-201ENST00000231238 AP1G2O75843 785 aa11.71□□□□□ -0.53
TTC1-201ENST00000231238 ZNF511Q8NB15 262 aa11.71□□□□□ -0.53
TTC1-201ENST00000231238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.71□□□□□ -0.53
TTC1-201ENST00000231238 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.53
TTC1-201ENST00000231238 ANKRD2Q9GZV1 360 aa11.71□□□□□ -0.53
TTC1-201ENST00000231238 SNRKQ9NRH2 765 aa11.71□□□□□ -0.53
TTC1-201ENST00000231238 NDUFB9Q9Y6M9 179 aa11.71□□□□□ -0.53
TTC1-201ENST00000231238 SGSM2O43147 1006 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 NMIQ13287 307 aaPredicted RBP11.7□□□□□ -0.54
TTC1-201ENST00000231238 CAVIN4Q5BKX8 364 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 CYP4X1Q8N118 509 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 VGLL2Q8N8G2 317 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 KBTBD3Q8NAB2 608 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 CELF1Q92879 486 aaKnown RBP11.7□□□□□ -0.54
TTC1-201ENST00000231238 RBM17Q96I25 401 aaKnown RBP11.7□□□□□ -0.54
TTC1-201ENST00000231238 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.7□□□□□ -0.54
TTC1-201ENST00000231238 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
TTC1-201ENST00000231238 COL24A1Q17RW2 1714 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 SIAH2O43255 324 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 FRAT2O75474 233 aaPredicted RBP11.7□□□□□ -0.54
TTC1-201ENST00000231238 TM4SF1P30408 202 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 TTF1Q15361 905 aaPredicted RBP11.7□□□□□ -0.54
TTC1-201ENST00000231238 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 CCDC102BQ68D86 513 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
TTC1-201ENST00000231238 TMX4Q9H1E5 349 aaPredicted RBP11.7□□□□□ -0.54
TTC1-201ENST00000231238 RAD50Q92878 1312 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 FAM187AA6NFU0 413 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
TTC1-201ENST00000231238 MMP10P09238 476 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 DDR1Q08345 913 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 GRAPQ13588 217 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 RABEP1Q15276 862 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 ZSCAN25Q6NSZ9 544 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 GRAPLQ8TC17 118 aaPredicted RBP11.69□□□□□ -0.54
TTC1-201ENST00000231238 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 ANKIB1Q9P2G1 1089 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 MINPP1Q9UNW1 487 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 RFX7Q2KHR2 1363 aa11.69□□□□□ -0.54
TTC1-201ENST00000231238 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
TTC1-201ENST00000231238 LRP5O75197 1615 aa11.68□□□□□ -0.54
TTC1-201ENST00000231238 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
TTC1-201ENST00000231238 EPB41L2O43491 1005 aaKnown RBP11.68□□□□□ -0.54
TTC1-201ENST00000231238 DGAT1O75907 488 aa11.68□□□□□ -0.54
TTC1-201ENST00000231238 HSP90AA1P07900 732 aaKnown RBP11.68□□□□□ -0.54
TTC1-201ENST00000231238 FGFR2P21802 821 aa11.68□□□□□ -0.54
TTC1-201ENST00000231238 ZAP70P43403 619 aa11.68□□□□□ -0.54
TTC1-201ENST00000231238 PHKA1P46020 1223 aa11.68□□□□□ -0.54
TTC1-201ENST00000231238 UBE4AQ14139 1066 aa11.68□□□□□ -0.54
TTC1-201ENST00000231238 WASHC4Q2M389 1173 aa11.68□□□□□ -0.54
TTC1-201ENST00000231238 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
TTC1-201ENST00000231238 J3QL48 77 aa11.67□□□□□ -0.54
TTC1-201ENST00000231238 SNAP23O00161 211 aa11.67□□□□□ -0.54
TTC1-201ENST00000231238 IDH1O75874 414 aaKnown RBP11.67□□□□□ -0.54
TTC1-201ENST00000231238 ZFYP08048 801 aaPredicted RBP11.67□□□□□ -0.54
TTC1-201ENST00000231238 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
TTC1-201ENST00000231238 PKDCCQ504Y2 493 aa11.67□□□□□ -0.54
TTC1-201ENST00000231238 DEFB132Q7Z7B7 95 aa11.67□□□□□ -0.54
TTC1-201ENST00000231238 TICAM2Q86XR7 235 aa11.67□□□□□ -0.54
TTC1-201ENST00000231238 EHBP1Q8NDI1 1231 aa11.67□□□□□ -0.54
TTC1-201ENST00000231238 FOXJ1Q92949 421 aa11.67□□□□□ -0.54
TTC1-201ENST00000231238 ZNF512BQ96KM6 892 aaPredicted RBP11.67□□□□□ -0.54
TTC1-201ENST00000231238 HMX1Q9NP08 348 aaPredicted RBP11.67□□□□□ -0.54
TTC1-201ENST00000231238 TUBGCP6Q96RT7 1819 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 SPEF2Q9C093 1822 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 A0A0D9SFI3 127 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 TTC24A2A3L6 582 aaPredicted RBP11.66□□□□□ -0.54
TTC1-201ENST00000231238 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
TTC1-201ENST00000231238 USP17L8P0C7I0 530 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 ZKSCAN1P17029 563 aaPredicted RBP11.66□□□□□ -0.54
TTC1-201ENST00000231238 SMPD1P17405 629 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 PDE6BP35913 854 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 MCAMP43121 646 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 NR6A1Q15406 480 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 SPATA5Q8NB90 893 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 EPS8L1Q8TE68 723 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 BRIP1Q9BX63 1249 aa11.66□□□□□ -0.54
TTC1-201ENST00000231238 RGPD3A6NKT7 1758 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms