RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 MINDY4BA8MYZ0 360 aa26.04■■□□□ 1.76
HOXC8-201ENST00000040584 HDLBPQ00341 1268 aaKnown RBP26.04■■□□□ 1.76
HOXC8-201ENST00000040584 CTDSPL2Q05D32 466 aa26.04■■□□□ 1.76
HOXC8-201ENST00000040584 CIAPIN1Q6FI81 312 aa26.04■■□□□ 1.76
HOXC8-201ENST00000040584 APOBEC3HQ6NTF7 200 aaKnown RBP26.04■■□□□ 1.76
HOXC8-201ENST00000040584 GMLQ99445 158 aa26.04■■□□□ 1.76
HOXC8-201ENST00000040584 BAZ2AQ9UIF9 1905 aaKnown RBP26.04■■□□□ 1.76
HOXC8-201ENST00000040584 RBM5P52756 815 aaKnown RBP eCLIP26.03■■□□□ 1.76
HOXC8-201ENST00000040584 ZDHHC15Q96MV8 337 aa26.03■■□□□ 1.76
HOXC8-201ENST00000040584 CYP2D7A0A087X1C5 515 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 USP17L12C9JPN9 530 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 USP17L21D6R901 530 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 CTR9Q6PD62 1173 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 TCEANC2Q96MN5 208 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 GZF1Q9H116 711 aaPredicted RBP26.02■■□□□ 1.76
HOXC8-201ENST00000040584 PDRG1Q9NUG6 133 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 MKRN1Q9UHC7 482 aaKnown RBP26.02■■□□□ 1.76
HOXC8-201ENST00000040584 SERPINA10Q9UK55 444 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 SMIM22K7EJ46 135 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 XRCC6P12956 609 aaKnown RBP eCLIP26.02■■□□□ 1.76
HOXC8-201ENST00000040584 RPS6KB1P23443 525 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 PPARAQ07869 468 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 MAPKAPK5Q8IW41 473 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 INCENPQ9NQS7 918 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 USP40Q9NVE5 1235 aa26.02■■□□□ 1.76
HOXC8-201ENST00000040584 LAMA4Q16363 1823 aa26.01■■□□□ 1.76
HOXC8-201ENST00000040584 STK11IPQ8N1F8 1099 aa26.01■■□□□ 1.75
HOXC8-201ENST00000040584 MCM9Q9NXL9 1143 aa26.01■■□□□ 1.75
HOXC8-201ENST00000040584 FZD9O00144 591 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 LMNB1P20700 586 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 TNIP1Q15025 636 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 CDC42EP5Q6NZY7 148 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 NOL8Q76FK4 1167 aaKnown RBP26■■□□□ 1.75
HOXC8-201ENST00000040584 USP17L8P0C7I0 530 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 AK2P54819 239 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 CFAP100Q494V2 611 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 AGBL3Q8NEM8 1001 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 TACC3Q9Y6A5 838 aa26■■□□□ 1.75
HOXC8-201ENST00000040584 HMGB1P09429 215 aaKnown RBP25.99■■□□□ 1.75
HOXC8-201ENST00000040584 CYP2D6P10635 497 aa25.99■■□□□ 1.75
HOXC8-201ENST00000040584 EIF6P56537 245 aaKnown RBP25.99■■□□□ 1.75
HOXC8-201ENST00000040584 EVX2Q03828 476 aa25.99■■□□□ 1.75
HOXC8-201ENST00000040584 SLC4A8Q2Y0W8 1093 aa25.99■■□□□ 1.75
HOXC8-201ENST00000040584 LARP6Q9BRS8 491 aaKnown RBP25.98■■□□□ 1.75
HOXC8-201ENST00000040584 ALDH8A1Q9H2A2 487 aaPredicted RBP25.98■■□□□ 1.75
HOXC8-201ENST00000040584 RTN4Q9NQC3 1192 aaKnown RBP25.98■■□□□ 1.75
HOXC8-201ENST00000040584 ANAPC4Q9UJX5 808 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 CDK5RAP2Q96SN8 1893 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 FLT1P17948 1338 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 AKNAD1Q5T1N1 836 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 DHX32Q7L7V1 743 aaKnown RBP25.98■■□□□ 1.75
HOXC8-201ENST00000040584 OGFOD1Q8N543 542 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 NCOA7Q8NI08 942 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 NKX2-3Q8TAU0 364 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 FOXD4L1Q9NU39 408 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 ARPP21Q9UBL0 812 aaPredicted RBP25.98■■□□□ 1.75
HOXC8-201ENST00000040584 SAP30BPQ9UHR5 308 aaKnown RBP25.98■■□□□ 1.75
HOXC8-201ENST00000040584 HDAC9Q9UKV0 1011 aa25.98■■□□□ 1.75
HOXC8-201ENST00000040584 NEDD4P46934 1319 aa25.97■■□□□ 1.75
HOXC8-201ENST00000040584 WDHD1O75717 1129 aaPredicted RBP25.97■■□□□ 1.75
HOXC8-201ENST00000040584 SBK1Q52WX2 424 aa25.97■■□□□ 1.75
HOXC8-201ENST00000040584 CHST3Q7LGC8 479 aa25.97■■□□□ 1.75
HOXC8-201ENST00000040584 TRDNQ13061 729 aa25.96■■□□□ 1.75
HOXC8-201ENST00000040584 PICALMQ13492 652 aa25.96■■□□□ 1.75
HOXC8-201ENST00000040584 MFSD6Q6ZSS7 791 aa25.96■■□□□ 1.75
HOXC8-201ENST00000040584 RALYLQ86SE5 291 aaKnown RBP25.96■■□□□ 1.75
HOXC8-201ENST00000040584 STAG1Q8WVM7 1258 aa25.96■■□□□ 1.75
HOXC8-201ENST00000040584 TMX3Q96JJ7 454 aa25.96■■□□□ 1.75
HOXC8-201ENST00000040584 PRMT6Q96LA8 375 aaPredicted RBP25.96■■□□□ 1.75
HOXC8-201ENST00000040584 LRRC2Q9BYS8 371 aa25.96■■□□□ 1.75
HOXC8-201ENST00000040584 GJA3Q9Y6H8 435 aa25.96■■□□□ 1.75
HOXC8-201ENST00000040584 ZNF541Q9H0D2 1346 aa25.96■■□□□ 1.75
HOXC8-201ENST00000040584 BAG4O95429 457 aaKnown RBP25.96■■□□□ 1.75
HOXC8-201ENST00000040584 EXOSC10Q01780 885 aaKnown RBP25.96■■□□□ 1.75
HOXC8-201ENST00000040584 MB21D2Q8IYB1 491 aaPredicted RBP25.96■■□□□ 1.75
HOXC8-201ENST00000040584 TIAM2Q8IVF5 1701 aa25.95■■□□□ 1.74
HOXC8-201ENST00000040584 DDX4Q9NQI0 724 aaKnown RBP25.95■■□□□ 1.74
HOXC8-201ENST00000040584 NAV1Q8NEY1 1877 aa25.95■■□□□ 1.74
HOXC8-201ENST00000040584 B4E1Z4 1266 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 CACNB3P54284 484 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 C12orf60Q5U649 245 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 GRPEL1Q9HAV7 217 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 SBF1O95248 1867 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 SHTN1A0MZ66 631 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 NFIAQ12857 509 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 KLHL40Q2TBA0 621 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 RRP12Q5JTH9 1297 aaKnown RBP25.94■■□□□ 1.74
HOXC8-201ENST00000040584 Q6ZUG5 572 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 RNF41Q9H4P4 317 aaPredicted RBP25.94■■□□□ 1.74
HOXC8-201ENST00000040584 TDRD3Q9H7E2 651 aaKnown RBP25.94■■□□□ 1.74
HOXC8-201ENST00000040584 TOMM22Q9NS69 142 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 LIMCH1Q9UPQ0 1083 aa25.94■■□□□ 1.74
HOXC8-201ENST00000040584 POLR3DP05423 398 aaPredicted RBP25.93■■□□□ 1.74
HOXC8-201ENST00000040584 TOB2Q14106 344 aaPredicted RBP25.93■■□□□ 1.74
HOXC8-201ENST00000040584 DLGAP5Q15398 846 aa25.93■■□□□ 1.74
HOXC8-201ENST00000040584 MCM5P33992 734 aa25.92■■□□□ 1.74
HOXC8-201ENST00000040584 PLCD1P51178 756 aa25.92■■□□□ 1.74
HOXC8-201ENST00000040584 ANKRD1Q15327 319 aa25.92■■□□□ 1.74
HOXC8-201ENST00000040584 GPR162Q16538 588 aa25.92■■□□□ 1.74
HOXC8-201ENST00000040584 AMOTL1Q8IY63 956 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms