RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Skap2Q3UND0 358 aa11.53□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Cyp26b1Q811W2 512 aa11.53□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Syne3Q4FZC9 975 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Mns1Q61884 491 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Polr3gQ6NXY9 223 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Hoxc10P31257 342 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 TchpQ3TVW5 497 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Arhgap10Q6Y5D8 786 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Defb15Q8R2I5 79 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Wasf1Q8R5H6 559 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Amotl1Q9D4H4 968 aa11.52□□□□□ -0.56
Pdgfra-202ENSMUST00000168162 Gm5483B2RV77 97 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 MsnP26041 577 aaKnown RBP11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Gtf3c3Q3TMP1 882 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Zfp449Q8CB76 518 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Trpc3Q9QZC1 836 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Mug1P28665 1476 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Aplp1Q03157 653 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Tmem67Q8BR76 992 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Maged1Q9QYH6 775 aaKnown RBP11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Tbkbp1A2A9T0 611 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Copb2O55029 905 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Syn1O88935 706 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 SqleP52019 572 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Akap4Q60662 849 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ercc6lQ8BHK9 1240 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Lonrf3Q9D4H7 753 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Kifap3P70188 793 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Lrrfip1Q3UZ39 729 aaKnown RBP11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Prpf4bQ61136 1007 aaKnown RBP11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Krt9Q6RHW0 743 aa11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Bag3Q9JLV1 577 aaKnown RBP11.52□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Tbc1d2bQ3U0J8 965 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Znf652Q5DU09 608 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Filip1lQ6P6L0 1131 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Dalrd3Q6PJN8 538 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Dpp8Q80YA7 892 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cep55Q8BT07 462 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 GraspQ9JJA9 392 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Slc2a5Q9WV38 501 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Rtp1Q8C8C1 263 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Riox2Q8CD15 465 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Prim1P20664 417 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Aldh16a1Q571I9 802 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Gpatch3Q8BIY1 525 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Asah2Q9JHE3 756 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Zscan25B2RX31 543 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Lrsam1Q80ZI6 727 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cog5Q8C0L8 829 aa11.51□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ercc6l2Q9JIM3 1537 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Zscan29E9Q5B4 869 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cc2d1bQ8BRN9 848 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 C8aQ8K182 587 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Shroom2A2ALU4 1481 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Slc4a3P16283 1227 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Zfp42P22227 288 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 PogkQ80TC5 607 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ces2cQ91WG0 561 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Krt23Q99PS0 422 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cald1E9QA15 768 aaKnown RBP11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ctnnb1Q02248 781 aaKnown RBP11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Sfi1Q3UZY0 1216 aaKnown RBP11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Lrrc36Q3V0M2 755 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Drc7Q6V3W6 876 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cep83Q9D5R3 692 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cetn2Q9R1K9 172 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ass1P16460 412 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Larp1Q6ZQ58 1072 aaKnown RBP11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ece2Q80Z60 881 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Slc13a4Q8BZ82 625 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Nrbp2Q91V36 499 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Mcur1Q9CXD6 340 aa11.5□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Slc4a9E9PUP3 929 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Gm29609Q3UU56 907 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Hand2Q61039 217 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Fstl1Q62356 306 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Rapgefl1Q68EF8 662 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Gtf3c2Q8BL74 907 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 DseQ8BLI4 958 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Krt20Q9D312 431 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Sh3bgrQ9WUZ7 214 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Q3V0E1 1183 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Tsg101Q61187 391 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 SkiQ60698 725 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cwf19l2Q8BG79 887 aaKnown RBP11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Tktl2Q9D4D4 627 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 S100a15aQ6S5I3 108 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 KinQ8K339 391 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Efcab6Q6P1E8 1516 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Atp2b1G5E829 1220 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ddx10Q80Y44 875 aaKnown RBP11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Fam160b2Q80YR2 744 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 DpydQ8CHR6 1025 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Msh6P54276 1358 aaKnown RBP11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Fignl2J3QK54 644 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cyp2b10P12791 500 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Acvr1cQ8K348 493 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Acsf2Q8VCW8 615 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Trmt44Q9D2Q2 713 aa11.49□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Nos1Q9Z0J4 1429 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms