RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Ggnbp2Q5SV77 696 aa12.33□□□□□ -0.44
Trim61-201ENSMUST00000078409 Ccdc47Q9D024 483 aaKnown RBP12.33□□□□□ -0.44
Trim61-201ENSMUST00000078409 Calcoco2A2A6M5 331 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Zfp42P22227 288 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Abcd1P48410 736 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Sgsm2Q80U12 1005 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Gjc2Q8BQU6 440 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Ppp4r3bQ922R5 820 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Igf2bp3Q9CPN8 579 aaKnown RBP12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Fzd9Q9R216 592 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Znf609Q8BZ47 1413 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Lcmt1A0A0U1RNF2 332 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Ppfia4B8QI36 1187 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 StimateQ3UF25 288 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Zscan26Q5RJ54 466 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Gbp4Q61107 620 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Prpf4bQ61136 1007 aaKnown RBP12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Anp32cQ64G17 123 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Gm9758Q80ZT2 255 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 TxlnbQ8VBT1 685 aa12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Mrpl11Q9CQF0 192 aaKnown RBP12.32□□□□□ -0.44
Trim61-201ENSMUST00000078409 Cfdp1O88271 295 aaKnown RBP12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Trim30aP15533 496 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Cxcl9P18340 126 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Btg3P50615 252 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Evi5P97366 809 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 LnpkQ7TQ95 425 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 LarsQ8BMJ2 1178 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Olfml1Q8BSH2 233 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Spata32Q8C5V0 334 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Spats2Q8K1N4 545 aaKnown RBP12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Atg7Q9D906 698 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Myoz2Q9JJW5 264 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Pcdh15Q99PJ1 1943 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Uhrf1bp1B2KF50 1429 aa12.31□□□□□ -0.44
Trim61-201ENSMUST00000078409 Speer4aF8VPX6 267 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Pnmal2G3X9N3 661 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Tcp11l1Q8BTG3 509 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Trim7Q923T7 510 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Mkrn1Q9QXP6 481 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Pmfbp1Q9WVQ0 1022 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Tpx2A2APB8 745 aaKnown RBP12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Fkbp4P30416 458 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Nrbp1Q99J45 535 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Mmtag2Q99LX5 260 aaKnown RBP12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 CactinQ9CS00 772 aaKnown RBP12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 UvssaQ9D479 717 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Snx1Q9WV80 522 aa12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 Kiaa0232Q80U59 1396 aaKnown RBP12.3□□□□□ -0.44
Trim61-201ENSMUST00000078409 GmpsQ3THK7 693 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Exd1Q8CDF7 570 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Kcnc4Q8R1C0 628 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Lmbr1Q9JIT0 490 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Celf2Q9Z0H4 508 aaKnown RBP12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Dnajc21E9Q8D0 531 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Rb1P13405 921 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Lrrfip1Q3UZ39 729 aaKnown RBP12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Scaf8Q6DID3 1268 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Acap3Q6NXL5 833 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 SympkQ80X82 1284 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Fbxo38Q8BMI0 1194 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Cyp2d12Q8BVD2 504 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Q8BZJ8 459 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Ccdc178Q8CDV0 866 aa12.29□□□□□ -0.44
Trim61-201ENSMUST00000078409 Arap2Q8BZ05 1703 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Rnf123Q5XPI3 1314 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Gm6268A2A3U9 297 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Pabpc1lA2A5N3 607 aaKnown RBP12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Sptbn5F6UCX4 1208 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 ByslO54825 436 aaKnown RBP12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Becn2P0DM65 447 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Hoxa2P31245 372 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 LtbrP50284 415 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Pold1P52431 1105 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Rtel1Q0VGM9 1203 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Mettl14Q3UIK4 456 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Ccdc84Q4VA36 332 aaKnown RBP12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 RubcnQ80U62 956 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Fam53cQ8BXQ8 393 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Plekhg6Q8R0J1 787 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Ttc1Q91Z38 292 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Calr3Q9D9Q6 380 aa12.28□□□□□ -0.44
Trim61-201ENSMUST00000078409 Prpmp5E9PXN1 296 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Nrg3O35181 713 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Cavin1O54724 392 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 AfpP02772 605 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Igfbp6P47880 238 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Nat2P50295 290 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Hdgfl1Q2VPR5 283 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Mansc4Q3UU94 337 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Tmem119Q8R138 280 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Znf445Q8R2V3 986 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 Vps33aQ9D2N9 598 aa12.27□□□□□ -0.44
Trim61-201ENSMUST00000078409 PnnO35691 725 aaKnown RBP12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 FosbP13346 338 aa12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 Rph3aP47708 681 aa12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 VdrP48281 422 aa12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 Retreg2Q6NS82 541 aa12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 Cfap69Q8BH53 942 aa12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 Vps37aQ8CHS8 397 aa12.27□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 128.7 ms