RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C HTA2P04912 132 aa7.99□□□□□ -1.13
VPS25YJR102C VNX1P42839 908 aa7.99□□□□□ -1.13
VPS25YJR102C VHR2P40041 505 aa7.97□□□□□ -1.13
VPS25YJR102C SPP1Q03012 353 aa7.97□□□□□ -1.13
VPS25YJR102C EAP1P36041 632 aaKnown RBP7.95□□□□□ -1.14
VPS25YJR102C YGR273CP53329 174 aa7.94□□□□□ -1.14
VPS25YJR102C DSF2P38213 736 aa7.93□□□□□ -1.14
VPS25YJR102C TIF11P38912 153 aaKnown RBP7.93□□□□□ -1.14
VPS25YJR102C ULI1P43604 169 aa7.93□□□□□ -1.14
VPS25YJR102C MAM3Q12296 706 aa7.92□□□□□ -1.14
VPS25YJR102C TRP5P00931 707 aaKnown RBP7.91□□□□□ -1.14
VPS25YJR102C SOL3P38858 249 aa7.91□□□□□ -1.14
VPS25YJR102C YEL023CP39992 682 aa7.9□□□□□ -1.14
VPS25YJR102C LEO1P38439 464 aa7.89□□□□□ -1.15
VPS25YJR102C KIC1P38692 1080 aa7.89□□□□□ -1.15
VPS25YJR102C YLR326WQ06170 240 aaKnown RBP7.88□□□□□ -1.15
VPS25YJR102C MAK21Q12176 1025 aaKnown RBP7.88□□□□□ -1.15
VPS25YJR102C KEX1P09620 729 aa7.87□□□□□ -1.15
VPS25YJR102C UBP14P38237 781 aaKnown RBP7.87□□□□□ -1.15
VPS25YJR102C IES2P40154 320 aa7.87□□□□□ -1.15
VPS25YJR102C COX6P00427 148 aa7.86□□□□□ -1.15
VPS25YJR102C RAD54P32863 898 aa7.86□□□□□ -1.15
VPS25YJR102C NST1P53935 1240 aa7.84□□□□□ -1.15
VPS25YJR102C YDR090CQ03193 310 aa7.84□□□□□ -1.15
VPS25YJR102C MPH3P0CE00 602 aa7.83□□□□□ -1.16
VPS25YJR102C PTC4P38089 393 aa7.83□□□□□ -1.16
VPS25YJR102C AI4P03878 556 aa7.82□□□□□ -1.16
VPS25YJR102C RPN1P38764 993 aaKnown RBP7.82□□□□□ -1.16
VPS25YJR102C IOC2Q12072 812 aa7.82□□□□□ -1.16
VPS25YJR102C LDB19Q12502 818 aa7.82□□□□□ -1.16
VPS25YJR102C PCS60P38137 543 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
VPS25YJR102C ILV3P39522 585 aaKnown RBP7.81□□□□□ -1.16
VPS25YJR102C JIP4Q03361 876 aa7.81□□□□□ -1.16
VPS25YJR102C DAN4P47179 1161 aa7.79□□□□□ -1.16
VPS25YJR102C YNL035CP53962 389 aaKnown RBP7.79□□□□□ -1.16
VPS25YJR102C RTG1P32607 177 aa7.78□□□□□ -1.16
VPS25YJR102C DIT2P21595 489 aa7.77□□□□□ -1.17
VPS25YJR102C NUP42P49686 430 aaKnown RBP7.76□□□□□ -1.17
VPS25YJR102C YNR021WP53723 404 aaKnown RBP7.76□□□□□ -1.17
VPS25YJR102C GLC3P32775 704 aa7.75□□□□□ -1.17
VPS25YJR102C SLI15P38283 698 aa7.74□□□□□ -1.17
VPS25YJR102C TFG1P41895 735 aaPredicted RBP7.73□□□□□ -1.17
VPS25YJR102C PML39Q03760 334 aa7.73□□□□□ -1.17
VPS25YJR102C AIR2Q12476 344 aaKnown RBP7.73□□□□□ -1.17
VPS25YJR102C SEC61P32915 480 aa7.71□□□□□ -1.18
VPS25YJR102C RPP1BP10622 106 aaKnown RBP7.7□□□□□ -1.18
VPS25YJR102C YJL171CP46992 396 aa7.7□□□□□ -1.18
VPS25YJR102C ATF2P53296 535 aa7.7□□□□□ -1.18
VPS25YJR102C NCR1Q12200 1170 aa7.7□□□□□ -1.18
VPS25YJR102C MID1P41821 548 aa7.69□□□□□ -1.18
VPS25YJR102C FKH1P40466 484 aa7.68□□□□□ -1.18
VPS25YJR102C PEX29Q03370 554 aa7.68□□□□□ -1.18
VPS25YJR102C ORC6P38826 435 aa7.67□□□□□ -1.18
VPS25YJR102C CDC73Q06697 393 aa7.66□□□□□ -1.18
VPS25YJR102C KIN1P13185 1064 aa7.65□□□□□ -1.18
VPS25YJR102C PSE1P32337 1089 aaKnown RBP7.65□□□□□ -1.18
VPS25YJR102C AIM7Q12156 149 aa7.64□□□□□ -1.19
VPS25YJR102C PEX21P50091 288 aa7.63□□□□□ -1.19
VPS25YJR102C YDL129WQ07555 291 aa7.63□□□□□ -1.19
VPS25YJR102C MPC54Q08550 464 aa7.62□□□□□ -1.19
VPS25YJR102C SAP30P38429 201 aa7.61□□□□□ -1.19
VPS25YJR102C DPL1Q05567 589 aa7.61□□□□□ -1.19
VPS25YJR102C CSC1Q06538 782 aa7.6□□□□□ -1.19
VPS25YJR102C RGR1P19263 1082 aa7.59□□□□□ -1.19
VPS25YJR102C MVP1P40959 511 aaKnown RBP7.59□□□□□ -1.19
VPS25YJR102C TEA1P47988 759 aa7.58□□□□□ -1.2
VPS25YJR102C GAP1P19145 602 aaPredicted RBP7.56□□□□□ -1.2
VPS25YJR102C NMA111P53920 997 aa7.56□□□□□ -1.2
VPS25YJR102C TFB4Q12004 338 aa7.56□□□□□ -1.2
VPS25YJR102C YPR109WQ06104 294 aa7.55□□□□□ -1.2
VPS25YJR102C TUM1Q08686 304 aaKnown RBP7.55□□□□□ -1.2
VPS25YJR102C CLB5P30283 435 aa7.54□□□□□ -1.2
VPS25YJR102C ISU2Q12056 156 aa7.54□□□□□ -1.2
VPS25YJR102C BMT6Q12291 365 aa7.53□□□□□ -1.2
VPS25YJR102C YRR1Q12172 810 aa7.52□□□□□ -1.21
VPS25YJR102C DMA2P53924 522 aa7.51□□□□□ -1.21
VPS25YJR102C HAP5Q02516 242 aa7.51□□□□□ -1.21
VPS25YJR102C ELP4Q02884 456 aaKnown RBP7.51□□□□□ -1.21
VPS25YJR102C YMR196WQ04336 1088 aa7.49□□□□□ -1.21
VPS25YJR102C YDR344CQ05510 147 aa7.49□□□□□ -1.21
VPS25YJR102C GUA1P38625 525 aaKnown RBP7.48□□□□□ -1.21
VPS25YJR102C ARH1P48360 493 aa7.48□□□□□ -1.21
VPS25YJR102C NIS1P53939 407 aa7.46□□□□□ -1.22
VPS25YJR102C CSN12P47130 423 aa7.45□□□□□ -1.22
VPS25YJR102C PDR1P12383 1068 aa7.44□□□□□ -1.22
VPS25YJR102C TAF7Q05021 590 aa7.44□□□□□ -1.22
VPS25YJR102C HGH1P48362 394 aaKnown RBP7.43□□□□□ -1.22
VPS25YJR102C FPK1P53739 893 aa7.43□□□□□ -1.22
VPS25YJR102C TYW1Q08960 810 aaKnown RBP7.43□□□□□ -1.22
VPS25YJR102C SSA2P10592 639 aaKnown RBP7.42□□□□□ -1.22
VPS25YJR102C NUD1P32336 851 aa7.42□□□□□ -1.22
VPS25YJR102C NPL4P33755 580 aa7.42□□□□□ -1.22
VPS25YJR102C SPT23P35210 1082 aa7.41□□□□□ -1.22
VPS25YJR102C PRE3P38624 215 aa7.41□□□□□ -1.22
VPS25YJR102C BNI4P53858 892 aa7.41□□□□□ -1.22
VPS25YJR102C GLN1P32288 370 aaKnown RBP7.4□□□□□ -1.22
VPS25YJR102C PTC2P39966 464 aaKnown RBP7.4□□□□□ -1.22
VPS25YJR102C MMP1Q12372 583 aa7.39□□□□□ -1.23
VPS25YJR102C SCJ1P25303 377 aa7.38□□□□□ -1.23
VPS25YJR102C BRL1P38770 471 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms