RNA–Protein interactions for RNA: YHR089C

GAR1, Transcript of Protein component of the H/ACA snoRNP pseudouridylase complex, yeastyeast

Gene GAR1, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAR1YHR089C SNT2P53127 1403 aa21.88■■□□□ 1.09
GAR1YHR089C RPO21P04050 1733 aaKnown RBP21.87■■□□□ 1.09
GAR1YHR089C YRF1-1P0CX20 1796 aa21.82■■□□□ 1.08
GAR1YHR089C YRF1-5P0CX21 1796 aa21.82■■□□□ 1.08
GAR1YHR089C YRF1-8P0CX22 1796 aa21.82■■□□□ 1.08
GAR1YHR089C SAS10Q12136 610 aaPredicted RBP21.81■■□□□ 1.08
GAR1YHR089C LTE1P07866 1435 aa21.8■■□□□ 1.08
GAR1YHR089C TAF7Q05021 590 aa21.71■■□□□ 1.07
GAR1YHR089C MLP2P40457 1679 aa21.71■■□□□ 1.07
GAR1YHR089C ULS1Q08562 1619 aa21.69■■□□□ 1.06
GAR1YHR089C VPS15P22219 1454 aa21.69■■□□□ 1.06
GAR1YHR089C PDR15Q04182 1529 aaKnown RBP21.67■■□□□ 1.06
GAR1YHR089C GEA2P39993 1459 aaKnown RBP21.62■■□□□ 1.05
GAR1YHR089C RTT106P40161 455 aa21.58■■□□□ 1.05
GAR1YHR089C MET10P39692 1035 aa21.56■■□□□ 1.04
GAR1YHR089C PDR12Q02785 1511 aa21.51■■□□□ 1.03
GAR1YHR089C IRC20Q06554 1556 aa21.48■■□□□ 1.03
GAR1YHR089C BNI1P41832 1953 aa21.47■■□□□ 1.03
GAR1YHR089C SPO14P36126 1683 aa21.45■■□□□ 1.02
GAR1YHR089C IFH1P39520 1085 aa21.42■■□□□ 1.02
GAR1YHR089C GEA1P47102 1408 aaPredicted RBP21.42■■□□□ 1.02
GAR1YHR089C ITT1Q04638 464 aa21.39■■□□□ 1.01
GAR1YHR089C GDB1Q06625 1536 aa21.37■■□□□ 1.01
GAR1YHR089C DRS2P39524 1355 aa21.36■■□□□ 1.01
GAR1YHR089C NUP157P40064 1391 aaKnown RBP21.31■■□□□ 1
GAR1YHR089C NUP170P38181 1502 aa21.29■■□□□ 1
GAR1YHR089C TY3B-GQ99315 1547 aa21.27■■□□□ 1
GAR1YHR089C CAT8P39113 1433 aa21.25■□□□□ 0.99
GAR1YHR089C PDR10P51533 1564 aa21.25■□□□□ 0.99
GAR1YHR089C IQG1Q12280 1495 aa21.21■□□□□ 0.99
GAR1YHR089C YBT1P32386 1661 aa21.17■□□□□ 0.98
GAR1YHR089C MMS1Q06211 1407 aa21.14■□□□□ 0.98
GAR1YHR089C BUD3P25558 1636 aa21.11■□□□□ 0.97
GAR1YHR089C TRM3Q07527 1436 aa21.05■□□□□ 0.96
GAR1YHR089C ARO1P08566 1588 aaKnown RBP21.02■□□□□ 0.95
GAR1YHR089C DOP1Q03921 1698 aa21.01■□□□□ 0.95
GAR1YHR089C YSP2Q06681 1438 aa20.94■□□□□ 0.94
GAR1YHR089C CKB1P43639 278 aa20.92■□□□□ 0.94
GAR1YHR089C SEC7P11075 2009 aaKnown RBP20.9■□□□□ 0.94
GAR1YHR089C IKI3Q06706 1349 aaKnown RBP20.89■□□□□ 0.93
GAR1YHR089C DNF2Q12675 1612 aa20.86■□□□□ 0.93
GAR1YHR089C SRB8P25648 1427 aa20.84■□□□□ 0.93
GAR1YHR089C CHC1P22137 1653 aaKnown RBP20.8■□□□□ 0.92
GAR1YHR089C BNR1P40450 1375 aa20.75■□□□□ 0.91
GAR1YHR089C ABP1P15891 592 aaKnown RBP20.75■□□□□ 0.91
GAR1YHR089C SSM4P40318 1319 aa20.65■□□□□ 0.9
GAR1YHR089C MIF2P35201 549 aa20.58■□□□□ 0.89
GAR1YHR089C BUD21Q08492 214 aaPredicted RBP20.57■□□□□ 0.88
GAR1YHR089C YOR093CQ12275 1648 aa20.53■□□□□ 0.88
GAR1YHR089C YAP3P38749 330 aa20.41■□□□□ 0.86
GAR1YHR089C URN1Q06525 465 aaKnown RBP20.36■□□□□ 0.85
GAR1YHR089C NUP188P52593 1655 aaKnown RBP20.3■□□□□ 0.84
GAR1YHR089C DNF3Q12674 1656 aa20.3■□□□□ 0.84
GAR1YHR089C GCN2P15442 1659 aa20.27■□□□□ 0.84
GAR1YHR089C VMR1P38735 1592 aa20.25■□□□□ 0.83
GAR1YHR089C IPL1P38991 367 aa20.22■□□□□ 0.83
GAR1YHR089C PDR5P33302 1511 aaKnown RBP20.17■□□□□ 0.82
GAR1YHR089C IML1P47170 1584 aa20.13■□□□□ 0.81
GAR1YHR089C HAP1P0CE41 1502 aa20.13■□□□□ 0.81
GAR1YHR089C TYS1P36421 394 aaKnown RBP20.11■□□□□ 0.81
GAR1YHR089C MAK10Q02197 733 aa20.07■□□□□ 0.8
GAR1YHR089C PDR11P40550 1411 aa20.06■□□□□ 0.8
GAR1YHR089C YFR006WP43590 535 aa19.95■□□□□ 0.78
GAR1YHR089C PAF1P38351 445 aa19.93■□□□□ 0.78
GAR1YHR089C RAV1P47104 1357 aa19.91■□□□□ 0.78
GAR1YHR089C BFR2Q06631 534 aaKnown RBP19.84■□□□□ 0.77
GAR1YHR089C NOP7P53261 605 aaKnown RBP19.81■□□□□ 0.76
GAR1YHR089C RTC1Q08281 1341 aa19.8■□□□□ 0.76
GAR1YHR089C USO1P25386 1790 aa19.76■□□□□ 0.75
GAR1YHR089C TY1B-NL2Q99337 1749 aaKnown RBP19.72■□□□□ 0.75
GAR1YHR089C NUP192P47054 1683 aa19.66■□□□□ 0.74
GAR1YHR089C YMR196WQ04336 1088 aa19.65■□□□□ 0.74
GAR1YHR089C BCK1Q01389 1478 aa19.64■□□□□ 0.73
GAR1YHR089C CFT1Q06632 1357 aaKnown RBP19.6■□□□□ 0.73
GAR1YHR089C KRE5P22023 1365 aa19.59■□□□□ 0.73
GAR1YHR089C ALD4P46367 519 aaKnown RBP19.58■□□□□ 0.72
GAR1YHR089C MRX12P47084 519 aa19.56■□□□□ 0.72
GAR1YHR089C RAD9P14737 1309 aa19.55■□□□□ 0.72
GAR1YHR089C RIA1P53893 1110 aa19.53■□□□□ 0.72
GAR1YHR089C THI12P42883 340 aa19.52■□□□□ 0.72
GAR1YHR089C THI5P43534 340 aa19.52■□□□□ 0.72
GAR1YHR089C THI11P47183 340 aa19.52■□□□□ 0.72
GAR1YHR089C THI13Q07748 340 aa19.52■□□□□ 0.72
GAR1YHR089C CAB1Q04430 367 aa19.51■□□□□ 0.71
GAR1YHR089C ESL2P36168 1195 aa19.5■□□□□ 0.71
GAR1YHR089C TAF5P38129 798 aa19.45■□□□□ 0.7
GAR1YHR089C YNR029CP53729 429 aaKnown RBP19.43■□□□□ 0.7
GAR1YHR089C TY3B-IQ7LHG5 1498 aaKnown RBP19.35■□□□□ 0.69
GAR1YHR089C TAF8Q03750 510 aa19.35■□□□□ 0.69
GAR1YHR089C NAP1P25293 417 aaKnown RBP19.33■□□□□ 0.68
GAR1YHR089C KIP3P53086 805 aaKnown RBP19.25■□□□□ 0.67
GAR1YHR089C SPE2P21182 396 aa19.23■□□□□ 0.67
GAR1YHR089C YLR419WQ06698 1435 aaKnown RBP19.18■□□□□ 0.66
GAR1YHR089C ORC1P54784 914 aaPredicted RBP19.15■□□□□ 0.66
GAR1YHR089C RCM1P53972 490 aa19.13■□□□□ 0.65
GAR1YHR089C CPS1P27614 576 aa19.12■□□□□ 0.65
GAR1YHR089C PTP3P40048 928 aa19.11■□□□□ 0.65
GAR1YHR089C PPH3P32345 308 aa19.08■□□□□ 0.64
GAR1YHR089C POL5P39985 1022 aaKnown RBP19.07■□□□□ 0.64
GAR1YHR089C SCT1P32784 759 aa19.06■□□□□ 0.64
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms