RNA–Protein interactions for RNA: YHR016C

YSC84, Transcript of Actin-binding protein, yeastyeast

Gene YSC84, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSC84YHR016C NUP170P38181 1502 aa16.94■□□□□ 0.3
YSC84YHR016C STH1P32597 1359 aa16.94■□□□□ 0.3
YSC84YHR016C MET5P47169 1442 aa16.94■□□□□ 0.3
YSC84YHR016C NTE1Q04958 1679 aa16.9■□□□□ 0.3
YSC84YHR016C PDR15Q04182 1529 aaKnown RBP16.89■□□□□ 0.29
YSC84YHR016C RPO21P04050 1733 aaKnown RBP16.86■□□□□ 0.29
YSC84YHR016C ULS1Q08562 1619 aa16.85■□□□□ 0.29
YSC84YHR016C NUP159P40477 1460 aa16.81■□□□□ 0.28
YSC84YHR016C SNT2P53127 1403 aa16.8■□□□□ 0.28
YSC84YHR016C GEA1P47102 1408 aaPredicted RBP16.77■□□□□ 0.28
YSC84YHR016C YRF1-1P0CX20 1796 aa16.76■□□□□ 0.27
YSC84YHR016C YRF1-5P0CX21 1796 aa16.76■□□□□ 0.27
YSC84YHR016C YRF1-8P0CX22 1796 aa16.76■□□□□ 0.27
YSC84YHR016C SSM4P40318 1319 aa16.74■□□□□ 0.27
YSC84YHR016C IFH1P39520 1085 aa16.66■□□□□ 0.26
YSC84YHR016C TY3B-GQ99315 1547 aa16.65■□□□□ 0.26
YSC84YHR016C GEA2P39993 1459 aaKnown RBP16.64■□□□□ 0.25
YSC84YHR016C VPS15P22219 1454 aa16.61■□□□□ 0.25
YSC84YHR016C LTE1P07866 1435 aa16.61■□□□□ 0.25
YSC84YHR016C RTT106P40161 455 aa16.59■□□□□ 0.25
YSC84YHR016C IRC20Q06554 1556 aa16.56■□□□□ 0.24
YSC84YHR016C YBT1P32386 1661 aa16.56■□□□□ 0.24
YSC84YHR016C PDR12Q02785 1511 aa16.52■□□□□ 0.24
YSC84YHR016C SPO14P36126 1683 aa16.52■□□□□ 0.24
YSC84YHR016C MET10P39692 1035 aa16.52■□□□□ 0.23
YSC84YHR016C GDB1Q06625 1536 aa16.43■□□□□ 0.22
YSC84YHR016C CAT8P39113 1433 aa16.37■□□□□ 0.21
YSC84YHR016C BNI1P41832 1953 aa16.37■□□□□ 0.21
YSC84YHR016C NUP157P40064 1391 aaKnown RBP16.37■□□□□ 0.21
YSC84YHR016C PDR10P51533 1564 aa16.35■□□□□ 0.21
YSC84YHR016C NSR1P27476 414 aaKnown RBP RIP-Chip data16.33■□□□□ 0.2not detected
YSC84YHR016C DRS2P39524 1355 aa16.31■□□□□ 0.2
YSC84YHR016C IQG1Q12280 1495 aa16.28■□□□□ 0.2
YSC84YHR016C ITT1Q04638 464 aa16.27■□□□□ 0.19
YSC84YHR016C ARO1P08566 1588 aaKnown RBP16.23■□□□□ 0.19
YSC84YHR016C BUD3P25558 1636 aa16.22■□□□□ 0.19
YSC84YHR016C POL5P39985 1022 aaKnown RBP16.2■□□□□ 0.18
YSC84YHR016C GCN2P15442 1659 aa16.19■□□□□ 0.18
YSC84YHR016C SRB8P25648 1427 aa16.19■□□□□ 0.18
YSC84YHR016C DOP1Q03921 1698 aa16.15■□□□□ 0.18
YSC84YHR016C TRM3Q07527 1436 aa16.13■□□□□ 0.17
YSC84YHR016C CKB1P43639 278 aa16.11■□□□□ 0.17
YSC84YHR016C MMS1Q06211 1407 aa16.11■□□□□ 0.17
YSC84YHR016C YSP2Q06681 1438 aa16.09■□□□□ 0.17
YSC84YHR016C SEC7P11075 2009 aaKnown RBP16.08■□□□□ 0.17
YSC84YHR016C NOP2P40991 618 aaKnown RBP16.05■□□□□ 0.16
YSC84YHR016C CHC1P22137 1653 aaKnown RBP16.03■□□□□ 0.16
YSC84YHR016C ENP1P38333 483 aaKnown RBP16■□□□□ 0.15
YSC84YHR016C DNF2Q12675 1612 aa15.96■□□□□ 0.15
YSC84YHR016C PDR5P33302 1511 aaKnown RBP15.96■□□□□ 0.14
YSC84YHR016C BNR1P40450 1375 aa15.95■□□□□ 0.14
YSC84YHR016C SEC3P33332 1336 aaKnown RBP15.95■□□□□ 0.14
YSC84YHR016C SPT7P35177 1332 aa15.9■□□□□ 0.14
YSC84YHR016C BUD21Q08492 214 aaPredicted RBP15.87■□□□□ 0.13
YSC84YHR016C YOR093CQ12275 1648 aa15.85■□□□□ 0.13
YSC84YHR016C NOP7P53261 605 aaKnown RBP15.84■□□□□ 0.13
YSC84YHR016C ABP1P15891 592 aaKnown RBP15.76■□□□□ 0.11
YSC84YHR016C MHP1P43638 1398 aa15.7■□□□□ 0.1
YSC84YHR016C PAF1P38351 445 aa15.68■□□□□ 0.1
YSC84YHR016C NUP188P52593 1655 aaKnown RBP15.67■□□□□ 0.1
YSC84YHR016C BFR2Q06631 534 aaKnown RBP15.66■□□□□ 0.1
YSC84YHR016C TY3B-IQ7LHG5 1498 aaKnown RBP15.65■□□□□ 0.1
YSC84YHR016C VMR1P38735 1592 aa15.63■□□□□ 0.09
YSC84YHR016C YLR419WQ06698 1435 aaKnown RBP15.6■□□□□ 0.09
YSC84YHR016C YAP3P38749 330 aa15.6■□□□□ 0.09
YSC84YHR016C URN1Q06525 465 aaKnown RBP15.6■□□□□ 0.09
YSC84YHR016C PRS1P32895 427 aaKnown RBP15.59■□□□□ 0.09
YSC84YHR016C DNF3Q12674 1656 aa15.58■□□□□ 0.09
YSC84YHR016C RAV1P47104 1357 aa15.58■□□□□ 0.08
YSC84YHR016C PSD2P53037 1138 aaKnown RBP15.57■□□□□ 0.08
YSC84YHR016C PDR11P40550 1411 aa15.55■□□□□ 0.08
YSC84YHR016C ORC1P54784 914 aaPredicted RBP15.55■□□□□ 0.08
YSC84YHR016C IML1P47170 1584 aa15.54■□□□□ 0.08
YSC84YHR016C LEU3P08638 886 aa15.53■□□□□ 0.08
YSC84YHR016C RTC1Q08281 1341 aa15.52■□□□□ 0.08
YSC84YHR016C MIF2P35201 549 aa15.51■□□□□ 0.07
YSC84YHR016C IPL1P38991 367 aa15.5■□□□□ 0.07
YSC84YHR016C NUP192P47054 1683 aa15.47■□□□□ 0.07
YSC84YHR016C TYS1P36421 394 aaKnown RBP15.44■□□□□ 0.06
YSC84YHR016C HAP1P0CE41 1502 aa15.43■□□□□ 0.06
YSC84YHR016C TAF5P38129 798 aa15.41■□□□□ 0.06
YSC84YHR016C PDS5Q04264 1277 aa15.41■□□□□ 0.06
YSC84YHR016C ESL2P36168 1195 aa15.35■□□□□ 0.05
YSC84YHR016C KIP3P53086 805 aaKnown RBP15.34■□□□□ 0.05
YSC84YHR016C MAK10Q02197 733 aa15.33■□□□□ 0.04
YSC84YHR016C MLP1Q02455 1875 aaKnown RBP15.32■□□□□ 0.04
YSC84YHR016C NST1P53935 1240 aa15.29■□□□□ 0.04
YSC84YHR016C USO1P25386 1790 aa15.22■□□□□ 0.03
YSC84YHR016C SCT1P32784 759 aa15.2■□□□□ 0.02
YSC84YHR016C SPE2P21182 396 aa15.18■□□□□ 0.02
YSC84YHR016C TY1B-NL2Q99337 1749 aaKnown RBP15.15■□□□□ 0.02
YSC84YHR016C CFT1Q06632 1357 aaKnown RBP15.14■□□□□ 0.01
YSC84YHR016C TFA1P36100 482 aa15.14■□□□□ 0.01
YSC84YHR016C BCK1Q01389 1478 aa15.13■□□□□ 0.01
YSC84YHR016C RPP0P05317 312 aaKnown RBP15.08■□□□□ 0
YSC84YHR016C RTG3P38165 486 aa15.08■□□□□ 0
YSC84YHR016C ALD4P46367 519 aaKnown RBP15.07■□□□□ 0
YSC84YHR016C RAD9P14737 1309 aa15.07■□□□□ 0
YSC84YHR016C KRE5P22023 1365 aa15.07■□□□□ 0
YSC84YHR016C YFR006WP43590 535 aa15.06■□□□□ 0
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms