RNA–Protein interactions for RNA: YDR234W

LYS4, Transcript of Homoaconitase, yeastyeast

Gene LYS4, Length 2,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS4YDR234W TY1B-LR1Q12088 1755 aaKnown RBP15.91■□□□□ 0.14
LYS4YDR234W TY1B-NL1Q12112 1755 aa15.91■□□□□ 0.14
LYS4YDR234W TY1B-GR1Q12141 1755 aa15.91■□□□□ 0.14
LYS4YDR234W TY1B-BLQ12490 1755 aa15.91■□□□□ 0.14
LYS4YDR234W SNT2P53127 1403 aa15.9■□□□□ 0.14
LYS4YDR234W NUP170P38181 1502 aa15.87■□□□□ 0.13
LYS4YDR234W DNF1P32660 1571 aa15.86■□□□□ 0.13
LYS4YDR234W TY3B-GQ99315 1547 aa15.84■□□□□ 0.13
LYS4YDR234W RTT106P40161 455 aa15.81■□□□□ 0.12
LYS4YDR234W RPA190P10964 1664 aaKnown RBP15.79■□□□□ 0.12
LYS4YDR234W NTE1Q04958 1679 aa15.72■□□□□ 0.11
LYS4YDR234W GEA2P39993 1459 aaKnown RBP15.7■□□□□ 0.1
LYS4YDR234W VPS15P22219 1454 aa15.68■□□□□ 0.1
LYS4YDR234W RPO21P04050 1733 aaKnown RBP15.68■□□□□ 0.1
LYS4YDR234W YBT1P32386 1661 aa15.68■□□□□ 0.1
LYS4YDR234W IRC20Q06554 1556 aa15.65■□□□□ 0.1
LYS4YDR234W NUP159P40477 1460 aa15.63■□□□□ 0.09
LYS4YDR234W CAT8P39113 1433 aa15.58■□□□□ 0.08
LYS4YDR234W GDB1Q06625 1536 aa15.58■□□□□ 0.08
LYS4YDR234W CKB1P43639 278 aa15.54■□□□□ 0.08
LYS4YDR234W MET10P39692 1035 aa15.53■□□□□ 0.08
LYS4YDR234W PDR10P51533 1564 aa15.49■□□□□ 0.07
LYS4YDR234W YRF1-1P0CX20 1796 aa15.48■□□□□ 0.07
LYS4YDR234W YRF1-5P0CX21 1796 aa15.48■□□□□ 0.07
LYS4YDR234W YRF1-8P0CX22 1796 aa15.48■□□□□ 0.07
LYS4YDR234W ARO1P08566 1588 aaKnown RBP15.47■□□□□ 0.07
LYS4YDR234W SPO14P36126 1683 aa15.47■□□□□ 0.07
LYS4YDR234W SRB8P25648 1427 aa15.47■□□□□ 0.07
LYS4YDR234W NUP157P40064 1391 aaKnown RBP15.45■□□□□ 0.06
LYS4YDR234W PDR12Q02785 1511 aa15.44■□□□□ 0.06
LYS4YDR234W BUD3P25558 1636 aa15.41■□□□□ 0.06
LYS4YDR234W MET5P47169 1442 aa15.38■□□□□ 0.05
LYS4YDR234W BUD21Q08492 214 aaPredicted RBP15.33■□□□□ 0.04
LYS4YDR234W YSP2Q06681 1438 aa15.31■□□□□ 0.04
LYS4YDR234W POL5P39985 1022 aaKnown RBP15.28■□□□□ 0.04
LYS4YDR234W GCN2P15442 1659 aa15.23■□□□□ 0.03
LYS4YDR234W NSR1P27476 414 aaKnown RBP RIP-Chip data15.21■□□□□ 0.03not detected
LYS4YDR234W IQG1Q12280 1495 aa15.19■□□□□ 0.02
LYS4YDR234W MMS1Q06211 1407 aa15.19■□□□□ 0.02
LYS4YDR234W NOP7P53261 605 aaKnown RBP15.14■□□□□ 0.01
LYS4YDR234W BNR1P40450 1375 aa15.14■□□□□ 0.01
LYS4YDR234W SEC7P11075 2009 aaKnown RBP15.09■□□□□ 0.01
LYS4YDR234W PAF1P38351 445 aa15.02■□□□□ -0
LYS4YDR234W ORC1P54784 914 aaPredicted RBP15.02■□□□□ -0
LYS4YDR234W BFR2Q06631 534 aaKnown RBP15.01□□□□□ -0.01
LYS4YDR234W YOR093CQ12275 1648 aa15□□□□□ -0.01
LYS4YDR234W SPT7P35177 1332 aa14.99□□□□□ -0.01
LYS4YDR234W LTE1P07866 1435 aa14.99□□□□□ -0.01
LYS4YDR234W PDR5P33302 1511 aaKnown RBP14.94□□□□□ -0.02
LYS4YDR234W CHC1P22137 1653 aaKnown RBP14.94□□□□□ -0.02
LYS4YDR234W PDR11P40550 1411 aa14.94□□□□□ -0.02
LYS4YDR234W DRS2P39524 1355 aa14.91□□□□□ -0.02
LYS4YDR234W ENP1P38333 483 aaKnown RBP14.89□□□□□ -0.03
LYS4YDR234W DOP1Q03921 1698 aa14.88□□□□□ -0.03
LYS4YDR234W VMR1P38735 1592 aa14.88□□□□□ -0.03
LYS4YDR234W SEC3P33332 1336 aaKnown RBP14.88□□□□□ -0.03
LYS4YDR234W RAV1P47104 1357 aa14.86□□□□□ -0.03
LYS4YDR234W TRM3Q07527 1436 aa14.85□□□□□ -0.03
LYS4YDR234W LEU3P08638 886 aa14.85□□□□□ -0.03
LYS4YDR234W ITT1Q04638 464 aa14.85□□□□□ -0.03
LYS4YDR234W TAF5P38129 798 aa14.83□□□□□ -0.03
LYS4YDR234W RTC1Q08281 1341 aa14.83□□□□□ -0.04
LYS4YDR234W PSD2P53037 1138 aaKnown RBP14.79□□□□□ -0.04
LYS4YDR234W NUP188P52593 1655 aaKnown RBP14.79□□□□□ -0.04
LYS4YDR234W IML1P47170 1584 aa14.79□□□□□ -0.04
LYS4YDR234W MHP1P43638 1398 aa14.77□□□□□ -0.05
LYS4YDR234W TY3B-IQ7LHG5 1498 aaKnown RBP14.75□□□□□ -0.05
LYS4YDR234W TYS1P36421 394 aaKnown RBP14.75□□□□□ -0.05
LYS4YDR234W BNI1P41832 1953 aa14.74□□□□□ -0.05
LYS4YDR234W KIP3P53086 805 aaKnown RBP14.74□□□□□ -0.05
LYS4YDR234W DNF2Q12675 1612 aa14.73□□□□□ -0.05
LYS4YDR234W NOP2P40991 618 aaKnown RBP14.7□□□□□ -0.06
LYS4YDR234W ESL2P36168 1195 aa14.7□□□□□ -0.06
LYS4YDR234W NUP192P47054 1683 aa14.69□□□□□ -0.06
LYS4YDR234W IPL1P38991 367 aa14.68□□□□□ -0.06
LYS4YDR234W YLR419WQ06698 1435 aaKnown RBP14.66□□□□□ -0.06
LYS4YDR234W PDS5Q04264 1277 aa14.66□□□□□ -0.06
LYS4YDR234W NST1P53935 1240 aa14.61□□□□□ -0.07
LYS4YDR234W PRS1P32895 427 aaKnown RBP14.59□□□□□ -0.07
LYS4YDR234W SPE2P21182 396 aa14.57□□□□□ -0.08
LYS4YDR234W URN1Q06525 465 aaKnown RBP14.57□□□□□ -0.08
LYS4YDR234W RAD9P14737 1309 aa14.56□□□□□ -0.08
LYS4YDR234W YAP3P38749 330 aa14.56□□□□□ -0.08
LYS4YDR234W TAF8Q03750 510 aa14.54□□□□□ -0.08
LYS4YDR234W ALD4P46367 519 aaKnown RBP14.51□□□□□ -0.09
LYS4YDR234W CAB1Q04430 367 aa14.5□□□□□ -0.09
LYS4YDR234W RTG3P38165 486 aa14.46□□□□□ -0.09
LYS4YDR234W CHZ1P40019 153 aaPredicted RBP14.46□□□□□ -0.09
LYS4YDR234W BCK1Q01389 1478 aa14.45□□□□□ -0.1
LYS4YDR234W SCT1P32784 759 aa14.36□□□□□ -0.11
LYS4YDR234W KRE5P22023 1365 aa14.35□□□□□ -0.11
LYS4YDR234W FKH1P40466 484 aa14.35□□□□□ -0.11
LYS4YDR234W MLP1Q02455 1875 aaKnown RBP14.33□□□□□ -0.12
LYS4YDR234W FUN12P39730 1002 aaKnown RBP14.3□□□□□ -0.12
LYS4YDR234W TRK1P12685 1235 aa14.3□□□□□ -0.12
LYS4YDR234W NAP1P25293 417 aaKnown RBP14.3□□□□□ -0.12
LYS4YDR234W MRX12P47084 519 aa14.3□□□□□ -0.12
LYS4YDR234W YEF3P16521 1044 aaKnown RBP14.28□□□□□ -0.12
LYS4YDR234W RIA1P53893 1110 aa14.27□□□□□ -0.13
LYS4YDR234W RCM1P53972 490 aa14.27□□□□□ -0.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms