RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeastyeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP13YBL067C OSW7P43611 510 aa9.33□□□□□ -0.92
UBP13YBL067C SUB1P54000 292 aaKnown RBP9.33□□□□□ -0.92
UBP13YBL067C VPS72Q03388 795 aa9.33□□□□□ -0.92
UBP13YBL067C BIM1P40013 344 aa9.33□□□□□ -0.92
UBP13YBL067C ATG32P40458 529 aa9.33□□□□□ -0.92
UBP13YBL067C NOB1Q08444 459 aaKnown RBP9.33□□□□□ -0.92
UBP13YBL067C IES2P40154 320 aa9.32□□□□□ -0.92
UBP13YBL067C PDR1P12383 1068 aa9.32□□□□□ -0.92
UBP13YBL067C SLD2P34252 453 aa9.31□□□□□ -0.92
UBP13YBL067C UBX5Q06682 500 aa9.31□□□□□ -0.92
UBP13YBL067C HEM3P28789 327 aa9.29□□□□□ -0.92
UBP13YBL067C ERG12P07277 443 aa9.29□□□□□ -0.92
UBP13YBL067C RCR1P38212 213 aa9.29□□□□□ -0.92
UBP13YBL067C YAF9P53930 226 aa9.28□□□□□ -0.92
UBP13YBL067C ALD2P47771 506 aa9.27□□□□□ -0.93
UBP13YBL067C CPS1P27614 576 aa9.25□□□□□ -0.93
UBP13YBL067C CST6P40535 587 aa9.25□□□□□ -0.93
UBP13YBL067C SSA4P22202 642 aaKnown RBP9.24□□□□□ -0.93
UBP13YBL067C ZDS1P50111 915 aaKnown RBP9.24□□□□□ -0.93
UBP13YBL067C SIS2P36024 562 aa9.23□□□□□ -0.93
UBP13YBL067C ISW1P38144 1129 aa9.23□□□□□ -0.93
UBP13YBL067C YJL007CP47080 104 aa9.22□□□□□ -0.93
UBP13YBL067C CDC3P32457 520 aaKnown RBP9.21□□□□□ -0.94
UBP13YBL067C CWC22P53333 577 aaKnown RBP9.21□□□□□ -0.94
UBP13YBL067C IPL1P38991 367 aa9.2□□□□□ -0.94
UBP13YBL067C RRP15Q06511 250 aaPredicted RBP9.2□□□□□ -0.94
UBP13YBL067C YML083CQ04526 418 aa9.2□□□□□ -0.94
UBP13YBL067C KEX1P09620 729 aa9.19□□□□□ -0.94
UBP13YBL067C PMC1P38929 1173 aaPredicted RBP9.19□□□□□ -0.94
UBP13YBL067C YKR023WP36119 530 aaKnown RBP9.17□□□□□ -0.94
UBP13YBL067C NMD2P38798 1089 aaKnown RBP9.17□□□□□ -0.94
UBP13YBL067C MAK21Q12176 1025 aaKnown RBP9.17□□□□□ -0.94
UBP13YBL067C HAT1Q12341 374 aa9.17□□□□□ -0.94
UBP13YBL067C TIF1P10081 395 aaKnown RBP9.17□□□□□ -0.94
UBP13YBL067C TTI1P36097 1038 aa9.17□□□□□ -0.94
UBP13YBL067C RNH70P53331 553 aa9.17□□□□□ -0.94
UBP13YBL067C FPR4Q06205 392 aaPredicted RBP9.17□□□□□ -0.94
UBP13YBL067C TOM20P35180 183 aa9.16□□□□□ -0.94
UBP13YBL067C ATE1P16639 503 aa9.13□□□□□ -0.95
UBP13YBL067C ITT1Q04638 464 aa9.13□□□□□ -0.95
UBP13YBL067C RPS0BP46654 252 aaKnown RBP9.12□□□□□ -0.95
UBP13YBL067C RPL34AP87262 121 aaPredicted RBP9.11□□□□□ -0.95
UBP13YBL067C MAG2Q06436 670 aaKnown RBP9.11□□□□□ -0.95
UBP13YBL067C RPA135P22138 1203 aaKnown RBP9.11□□□□□ -0.95
UBP13YBL067C AI2P03876 854 aa9.1□□□□□ -0.95
UBP13YBL067C PUP1P25043 261 aa9.09□□□□□ -0.95
UBP13YBL067C BIO2P32451 375 aa9.09□□□□□ -0.95
UBP13YBL067C ATF2P53296 535 aa9.09□□□□□ -0.95
UBP13YBL067C PRI1P10363 409 aa9.08□□□□□ -0.96
UBP13YBL067C TOA1P32773 286 aa9.08□□□□□ -0.96
UBP13YBL067C MNN4P36044 1178 aa9.08□□□□□ -0.96
UBP13YBL067C BRE1Q07457 700 aaKnown RBP9.08□□□□□ -0.96
UBP13YBL067C TSR4P25040 408 aa9.07□□□□□ -0.96
UBP13YBL067C NNF1P47149 201 aa9.07□□□□□ -0.96
UBP13YBL067C KIP3P53086 805 aaKnown RBP9.07□□□□□ -0.96
UBP13YBL067C AIM21P40563 679 aa9.07□□□□□ -0.96
UBP13YBL067C GAL11P19659 1081 aa9.06□□□□□ -0.96
UBP13YBL067C KTR1P27810 393 aaKnown RBP9.06□□□□□ -0.96
UBP13YBL067C MAK11P20484 414 aaKnown RBP9.05□□□□□ -0.96
UBP13YBL067C REF2P42073 533 aaPredicted RBP9.04□□□□□ -0.96
UBP13YBL067C CIT2P08679 460 aa9.03□□□□□ -0.96
UBP13YBL067C NAB3P38996 802 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
UBP13YBL067C YPR204WQ08995 1032 aa9.03□□□□□ -0.96
UBP13YBL067C YOL057WQ08225 711 aa9.03□□□□□ -0.96
UBP13YBL067C YOL098CQ12496 1037 aa9.03□□□□□ -0.96
UBP13YBL067C TPM2P40414 161 aa9.02□□□□□ -0.97
UBP13YBL067C IOC3P43596 787 aa9.02□□□□□ -0.97
UBP13YBL067C RLP24Q07915 199 aaKnown RBP9.02□□□□□ -0.97
UBP13YBL067C HIF1Q12373 385 aa9.02□□□□□ -0.97
UBP13YBL067C STB3Q12427 513 aa9□□□□□ -0.97
UBP13YBL067C COX6P00427 148 aa8.99□□□□□ -0.97
UBP13YBL067C NOP53Q12080 455 aaKnown RBP8.99□□□□□ -0.97
UBP13YBL067C MPE1P35728 441 aaKnown RBP8.98□□□□□ -0.97
UBP13YBL067C CSN12P47130 423 aa8.98□□□□□ -0.97
UBP13YBL067C ALG12P53730 551 aa8.98□□□□□ -0.97
UBP13YBL067C GRX4P32642 244 aa8.97□□□□□ -0.97
UBP13YBL067C SVL3Q03088 825 aaKnown RBP8.97□□□□□ -0.97
UBP13YBL067C WHI5Q12416 295 aa8.97□□□□□ -0.97
UBP13YBL067C TY4A-JP47023 414 aa8.97□□□□□ -0.97
UBP13YBL067C YDL121CQ07541 149 aa8.97□□□□□ -0.97
UBP13YBL067C RTG2P32608 588 aaKnown RBP8.96□□□□□ -0.97
UBP13YBL067C COQ8P27697 501 aa8.96□□□□□ -0.98
UBP13YBL067C RAD2P07276 1031 aa8.95□□□□□ -0.98
UBP13YBL067C YBL113CQ7M4S9 792 aa8.95□□□□□ -0.98
UBP13YBL067C SSA2P10592 639 aaKnown RBP8.94□□□□□ -0.98
UBP13YBL067C ERP5P38819 212 aa8.94□□□□□ -0.98
UBP13YBL067C MSC6Q08818 692 aaKnown RBP8.94□□□□□ -0.98
UBP13YBL067C SSB1P11484 613 aaKnown RBP8.93□□□□□ -0.98
UBP13YBL067C SSB2P40150 613 aaKnown RBP8.93□□□□□ -0.98
UBP13YBL067C MRM1P25270 412 aa8.93□□□□□ -0.98
UBP13YBL067C PPG1P32838 368 aa8.93□□□□□ -0.98
UBP13YBL067C DCD1P06773 312 aa8.92□□□□□ -0.98
UBP13YBL067C HOP09932 586 aa8.92□□□□□ -0.98
UBP13YBL067C MAK16P10962 306 aaPredicted RBP8.92□□□□□ -0.98
UBP13YBL067C STM1P39015 273 aaKnown RBP8.92□□□□□ -0.98
UBP13YBL067C ENP1P38333 483 aaKnown RBP8.92□□□□□ -0.98
UBP13YBL067C POL32P47110 350 aa8.92□□□□□ -0.98
UBP13YBL067C DNM1P54861 757 aa8.92□□□□□ -0.98
UBP13YBL067C GIR2Q03768 265 aaPredicted RBP8.92□□□□□ -0.98
UBP13YBL067C VMA4P22203 233 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms