RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 KIF13AQ9H1H9 1805 aa21.25■□□□□ 0.99
PHGDH-221ENST00000641573 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
PHGDH-221ENST00000641573 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
PHGDH-221ENST00000641573 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
PHGDH-221ENST00000641573 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
PHGDH-221ENST00000641573 FHAD1B1AJZ9 1412 aa21.16■□□□□ 0.98
PHGDH-221ENST00000641573 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
PHGDH-221ENST00000641573 PRG4Q92954 1404 aaPredicted RBP21.13■□□□□ 0.97
PHGDH-221ENST00000641573 NPM1P06748 294 aaKnown RBP eCLIP21.13■□□□□ 0.97
PHGDH-221ENST00000641573 KIF21BO75037 1637 aa21.13■□□□□ 0.97
PHGDH-221ENST00000641573 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
PHGDH-221ENST00000641573 ABCC10Q5T3U5 1492 aa21.11■□□□□ 0.97
PHGDH-221ENST00000641573 IGF1RP08069 1367 aa21.07■□□□□ 0.96
PHGDH-221ENST00000641573 PRXQ9BXM0 1461 aa21.07■□□□□ 0.96
PHGDH-221ENST00000641573 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
PHGDH-221ENST00000641573 KDM6BO15054 1643 aa21.05■□□□□ 0.96
PHGDH-221ENST00000641573 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
PHGDH-221ENST00000641573 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
PHGDH-221ENST00000641573 DIP2BQ9P265 1576 aa21.03■□□□□ 0.96
PHGDH-221ENST00000641573 RAPGEF2Q9Y4G8 1499 aa21.03■□□□□ 0.96
PHGDH-221ENST00000641573 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
PHGDH-221ENST00000641573 KDM4FA0A1W2PPD8 638 aa21.03■□□□□ 0.96
PHGDH-221ENST00000641573 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
PHGDH-221ENST00000641573 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
PHGDH-221ENST00000641573 ADCY10Q96PN6 1610 aa20.94■□□□□ 0.94
PHGDH-221ENST00000641573 CUL7Q14999 1698 aa20.94■□□□□ 0.94
PHGDH-221ENST00000641573 TSPOAP1O95153 1857 aa20.91■□□□□ 0.94
PHGDH-221ENST00000641573 CEP162Q5TB80 1403 aa20.9■□□□□ 0.94
PHGDH-221ENST00000641573 KIAA0586Q9BVV6 1533 aa20.8■□□□□ 0.92
PHGDH-221ENST00000641573 CLIP1P30622 1438 aa20.78■□□□□ 0.92
PHGDH-221ENST00000641573 ADGRL1O94910 1474 aa20.77■□□□□ 0.92
PHGDH-221ENST00000641573 PTPRGP23470 1445 aa20.73■□□□□ 0.91
PHGDH-221ENST00000641573 TTBK1Q5TCY1 1321 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-221ENST00000641573 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-221ENST00000641573 PLB1Q6P1J6 1458 aa20.69■□□□□ 0.9
PHGDH-221ENST00000641573 ABCC2Q92887 1545 aa20.69■□□□□ 0.9
PHGDH-221ENST00000641573 ASXL2Q76L83 1435 aa20.68■□□□□ 0.9
PHGDH-221ENST00000641573 HECW2Q9P2P5 1572 aa20.68■□□□□ 0.9
PHGDH-221ENST00000641573 GLI2P10070 1586 aa20.67■□□□□ 0.9
PHGDH-221ENST00000641573 CARMIL2Q6F5E8 1435 aa20.66■□□□□ 0.9
PHGDH-221ENST00000641573 PPRC1Q5VV67 1664 aaKnown RBP20.65■□□□□ 0.9
PHGDH-221ENST00000641573 CTTNBP2Q8WZ74 1663 aa20.64■□□□□ 0.89
PHGDH-221ENST00000641573 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
PHGDH-221ENST00000641573 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
PHGDH-221ENST00000641573 TEX14Q8IWB6 1497 aa20.59■□□□□ 0.89
PHGDH-221ENST00000641573 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
PHGDH-221ENST00000641573 UHRF1BP1LA0JNW5 1464 aa20.56■□□□□ 0.88
PHGDH-221ENST00000641573 UGGT2Q9NYU1 1516 aa20.56■□□□□ 0.88
PHGDH-221ENST00000641573 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-221ENST00000641573 UACAQ9BZF9 1416 aa20.54■□□□□ 0.88
PHGDH-221ENST00000641573 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
PHGDH-221ENST00000641573 MAP3K4Q9Y6R4 1608 aa20.53■□□□□ 0.88
PHGDH-221ENST00000641573 DISP1Q96F81 1524 aa20.52■□□□□ 0.87
PHGDH-221ENST00000641573 EFCAB5A4FU69 1503 aa20.51■□□□□ 0.87
PHGDH-221ENST00000641573 KDM5BQ9UGL1 1544 aa20.48■□□□□ 0.87
PHGDH-221ENST00000641573 FBXO41Q8TF61 875 aa20.46■□□□□ 0.87
PHGDH-221ENST00000641573 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
PHGDH-221ENST00000641573 SAMD9Q5K651 1589 aa20.44■□□□□ 0.86
PHGDH-221ENST00000641573 ZCCHC11Q5TAX3 1644 aaKnown RBP20.44■□□□□ 0.86
PHGDH-221ENST00000641573 FHOD3Q2V2M9 1422 aa20.43■□□□□ 0.86
PHGDH-221ENST00000641573 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
PHGDH-221ENST00000641573 PPARGC1BQ86YN6 1023 aaKnown RBP20.42■□□□□ 0.86
PHGDH-221ENST00000641573 WDR7Q9Y4E6 1490 aa20.38■□□□□ 0.85
PHGDH-221ENST00000641573 APLP2Q06481 763 aa20.38■□□□□ 0.85
PHGDH-221ENST00000641573 TRIM26Q12899 539 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-221ENST00000641573 CD109Q6YHK3 1445 aa20.34■□□□□ 0.85
PHGDH-221ENST00000641573 FMN1Q68DA7 1419 aa20.33■□□□□ 0.84
PHGDH-221ENST00000641573 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
PHGDH-221ENST00000641573 CFAP43Q8NDM7 1665 aa20.31■□□□□ 0.84
PHGDH-221ENST00000641573 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
PHGDH-221ENST00000641573 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
PHGDH-221ENST00000641573 CASKIN1Q8WXD9 1431 aa20.28■□□□□ 0.84
PHGDH-221ENST00000641573 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
PHGDH-221ENST00000641573 FYCO1Q9BQS8 1478 aa20.26■□□□□ 0.83
PHGDH-221ENST00000641573 ABCA8O94911 1581 aa20.25■□□□□ 0.83
PHGDH-221ENST00000641573 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-221ENST00000641573 MAP3K1Q13233 1512 aa20.22■□□□□ 0.83
PHGDH-221ENST00000641573 PTPRMP28827 1452 aa20.2■□□□□ 0.82
PHGDH-221ENST00000641573 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
PHGDH-221ENST00000641573 KANK4Q5T7N3 995 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-221ENST00000641573 ARAP3Q8WWN8 1544 aa20.18■□□□□ 0.82
PHGDH-221ENST00000641573 ADAMTSL3P82987 1691 aa20.14■□□□□ 0.81
PHGDH-221ENST00000641573 HECW1Q76N89 1606 aa20.12■□□□□ 0.81
PHGDH-221ENST00000641573 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
PHGDH-221ENST00000641573 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
PHGDH-221ENST00000641573 PHLDB1Q86UU1 1377 aa20.1■□□□□ 0.81
PHGDH-221ENST00000641573 ARID4BQ4LE39 1312 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-221ENST00000641573 CCDC18Q5T9S5 1454 aa20.08■□□□□ 0.81
PHGDH-221ENST00000641573 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
PHGDH-221ENST00000641573 RAPGEF6Q8TEU7 1601 aa20.07■□□□□ 0.8
PHGDH-221ENST00000641573 MADDQ8WXG6 1647 aa20.05■□□□□ 0.8
PHGDH-221ENST00000641573 BCORL1Q5H9F3 1711 aa20.05■□□□□ 0.8
PHGDH-221ENST00000641573 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
PHGDH-221ENST00000641573 RAPGEF3O95398 923 aa20.05■□□□□ 0.8
PHGDH-221ENST00000641573 ATP10BO94823 1461 aa20.05■□□□□ 0.8
PHGDH-221ENST00000641573 ABCA9Q8IUA7 1624 aa20.03■□□□□ 0.8
PHGDH-221ENST00000641573 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
PHGDH-221ENST00000641573 NEO1Q92859 1461 aa20.01■□□□□ 0.79
PHGDH-221ENST00000641573 MTUS2Q5JR59 1369 aa20■□□□□ 0.79
PHGDH-221ENST00000641573 CDK13Q14004 1512 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms