RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 JPH4Q96JJ6 628 aa25.76■■□□□ 1.71
SRRT-219ENST00000641476 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
SRRT-219ENST00000641476 NPM1P06748 294 aaKnown RBP eCLIP25.7■■□□□ 1.7
SRRT-219ENST00000641476 MAPKBP1O60336 1514 aa25.64■■□□□ 1.7
SRRT-219ENST00000641476 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
SRRT-219ENST00000641476 DIP2BQ9P265 1576 aa25.62■■□□□ 1.69
SRRT-219ENST00000641476 KDM4FA0A1W2PPD8 638 aa25.58■■□□□ 1.69
SRRT-219ENST00000641476 ADCY10Q96PN6 1610 aa25.58■■□□□ 1.69
SRRT-219ENST00000641476 CUL7Q14999 1698 aa25.56■■□□□ 1.68
SRRT-219ENST00000641476 KDM6BO15054 1643 aa25.55■■□□□ 1.68
SRRT-219ENST00000641476 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
SRRT-219ENST00000641476 KIAA0586Q9BVV6 1533 aa25.46■■□□□ 1.67
SRRT-219ENST00000641476 IGF1RP08069 1367 aa25.45■■□□□ 1.67
SRRT-219ENST00000641476 TSPOAP1O95153 1857 aa25.42■■□□□ 1.66
SRRT-219ENST00000641476 TTBK1Q5TCY1 1321 aaPredicted RBP25.4■■□□□ 1.66
SRRT-219ENST00000641476 ILDR1Q86SU0 546 aaPredicted RBP25.38■■□□□ 1.65
SRRT-219ENST00000641476 PTPRGP23470 1445 aa25.36■■□□□ 1.65
SRRT-219ENST00000641476 CARMIL1Q5VZK9 1371 aa25.31■■□□□ 1.64
SRRT-219ENST00000641476 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
SRRT-219ENST00000641476 ASXL2Q76L83 1435 aa25.28■■□□□ 1.64
SRRT-219ENST00000641476 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
SRRT-219ENST00000641476 ADGRL1O94910 1474 aa25.25■■□□□ 1.63
SRRT-219ENST00000641476 CARMIL2Q6F5E8 1435 aa25.24■■□□□ 1.63
SRRT-219ENST00000641476 IQGAP2Q13576 1575 aa25.23■■□□□ 1.63
SRRT-219ENST00000641476 PLB1Q6P1J6 1458 aa25.23■■□□□ 1.63
SRRT-219ENST00000641476 GLI2P10070 1586 aa25.2■■□□□ 1.62
SRRT-219ENST00000641476 PPRC1Q5VV67 1664 aaKnown RBP25.19■■□□□ 1.62
SRRT-219ENST00000641476 UHRF1BP1LA0JNW5 1464 aa25.15■■□□□ 1.62
SRRT-219ENST00000641476 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
SRRT-219ENST00000641476 COL17A1Q9UMD9 1497 aaPredicted RBP25.14■■□□□ 1.61
SRRT-219ENST00000641476 UACAQ9BZF9 1416 aa25.13■■□□□ 1.61
SRRT-219ENST00000641476 EPRSP07814 1512 aaKnown RBP25.1■■□□□ 1.61
SRRT-219ENST00000641476 DISP1Q96F81 1524 aa25.07■■□□□ 1.6
SRRT-219ENST00000641476 HECW2Q9P2P5 1572 aa25.06■■□□□ 1.6
SRRT-219ENST00000641476 UGGT2Q9NYU1 1516 aa25.06■■□□□ 1.6
SRRT-219ENST00000641476 CTTNBP2Q8WZ74 1663 aa25.05■■□□□ 1.6
SRRT-219ENST00000641476 TEX14Q8IWB6 1497 aa25.05■■□□□ 1.6
SRRT-219ENST00000641476 KDM5BQ9UGL1 1544 aa25.05■■□□□ 1.6
SRRT-219ENST00000641476 MAP3K4Q9Y6R4 1608 aa25.04■■□□□ 1.6
SRRT-219ENST00000641476 KIAA0556O60303 1618 aa25.02■■□□□ 1.6
SRRT-219ENST00000641476 ZCCHC11Q5TAX3 1644 aaKnown RBP24.98■■□□□ 1.59
SRRT-219ENST00000641476 PRXQ9BXM0 1461 aa24.94■■□□□ 1.58
SRRT-219ENST00000641476 WDR7Q9Y4E6 1490 aa24.93■■□□□ 1.58
SRRT-219ENST00000641476 CD109Q6YHK3 1445 aa24.84■■□□□ 1.57
SRRT-219ENST00000641476 KCNH8Q96L42 1107 aa24.83■■□□□ 1.57
SRRT-219ENST00000641476 GOLGA3Q08378 1498 aa24.83■■□□□ 1.56
SRRT-219ENST00000641476 MAGI3Q5TCQ9 1506 aa24.81■■□□□ 1.56
SRRT-219ENST00000641476 ABCA8O94911 1581 aa24.76■■□□□ 1.55
SRRT-219ENST00000641476 CFAP43Q8NDM7 1665 aa24.75■■□□□ 1.55
SRRT-219ENST00000641476 KIF21BO75037 1637 aa24.72■■□□□ 1.55
SRRT-219ENST00000641476 EEA1Q15075 1411 aa24.7■■□□□ 1.55
SRRT-219ENST00000641476 FBXO41Q8TF61 875 aa24.68■■□□□ 1.54
SRRT-219ENST00000641476 SAMD9Q5K651 1589 aa24.67■■□□□ 1.54
SRRT-219ENST00000641476 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
SRRT-219ENST00000641476 ARID3CA6NKF2 412 aa24.65■■□□□ 1.54
SRRT-219ENST00000641476 ARAP3Q8WWN8 1544 aa24.62■■□□□ 1.53
SRRT-219ENST00000641476 PTPRMP28827 1452 aa24.59■■□□□ 1.53
SRRT-219ENST00000641476 RAPGEF3O95398 923 aa24.54■■□□□ 1.52
SRRT-219ENST00000641476 RAPGEF6Q8TEU7 1601 aa24.53■■□□□ 1.52
SRRT-219ENST00000641476 ATP10BO94823 1461 aa24.52■■□□□ 1.52
SRRT-219ENST00000641476 P3H3Q8IVL6 736 aa24.52■■□□□ 1.52
SRRT-219ENST00000641476 FAM9AQ8IZU1 332 aaPredicted RBP24.52■■□□□ 1.52
SRRT-219ENST00000641476 ADAMTSL3P82987 1691 aa24.51■■□□□ 1.51
SRRT-219ENST00000641476 PHLDB1Q86UU1 1377 aa24.51■■□□□ 1.51
SRRT-219ENST00000641476 ARID4BQ4LE39 1312 aaPredicted RBP24.49■■□□□ 1.51
SRRT-219ENST00000641476 ABCA9Q8IUA7 1624 aa24.47■■□□□ 1.51
SRRT-219ENST00000641476 FHOD3Q2V2M9 1422 aa24.45■■□□□ 1.51
SRRT-219ENST00000641476 PCF11O94913 1555 aaKnown RBP24.45■■□□□ 1.5
SRRT-219ENST00000641476 EFCAB5A4FU69 1503 aa24.45■■□□□ 1.5
SRRT-219ENST00000641476 NEO1Q92859 1461 aa24.45■■□□□ 1.5
SRRT-219ENST00000641476 MADDQ8WXG6 1647 aa24.43■■□□□ 1.5
SRRT-219ENST00000641476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.43■■□□□ 1.5
SRRT-219ENST00000641476 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
SRRT-219ENST00000641476 LMTK3Q96Q04 1460 aa24.42■■□□□ 1.5
SRRT-219ENST00000641476 NUP153P49790 1475 aaKnown RBP24.41■■□□□ 1.5
SRRT-219ENST00000641476 BCORL1Q5H9F3 1711 aa24.41■■□□□ 1.5
SRRT-219ENST00000641476 FRMPD1Q5SYB0 1578 aa24.4■■□□□ 1.5
SRRT-219ENST00000641476 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
SRRT-219ENST00000641476 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
SRRT-219ENST00000641476 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
SRRT-219ENST00000641476 HSPA2P54652 639 aa24.33■■□□□ 1.49
SRRT-219ENST00000641476 ARHGEF40Q8TER5 1519 aa24.32■■□□□ 1.48
SRRT-219ENST00000641476 RIMS1Q86UR5 1692 aaKnown RBP24.3■■□□□ 1.48
SRRT-219ENST00000641476 DENND4BO75064 1496 aaPredicted RBP24.29■■□□□ 1.48
SRRT-219ENST00000641476 AKNAQ7Z591 1439 aa24.24■■□□□ 1.47
SRRT-219ENST00000641476 FANCAO15360 1455 aa24.22■■□□□ 1.47
SRRT-219ENST00000641476 POGZQ7Z3K3 1410 aa24.22■■□□□ 1.47
SRRT-219ENST00000641476 CDK13Q14004 1512 aaKnown RBP24.21■■□□□ 1.47
SRRT-219ENST00000641476 PLEKHD1A6NEE1 506 aa24.21■■□□□ 1.47
SRRT-219ENST00000641476 EHMT2Q96KQ7 1210 aa24.21■■□□□ 1.47
SRRT-219ENST00000641476 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.47
SRRT-219ENST00000641476 RICTORQ6R327 1708 aa24.2■■□□□ 1.46
SRRT-219ENST00000641476 MLECQ14165 292 aa24.19■■□□□ 1.46
SRRT-219ENST00000641476 CERKQ8TCT0 537 aa24.19■■□□□ 1.46
SRRT-219ENST00000641476 HECW1Q76N89 1606 aa24.19■■□□□ 1.46
SRRT-219ENST00000641476 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
SRRT-219ENST00000641476 TTC37Q6PGP7 1564 aa24.18■■□□□ 1.46
SRRT-219ENST00000641476 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
SRRT-219ENST00000641476 ZFYVE16Q7Z3T8 1539 aa24.17■■□□□ 1.46
SRRT-219ENST00000641476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms