RNA–Protein interactions for RNA: ENST00000640583.1

MED17-228, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 2,835 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-228ENST00000640583 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
MED17-228ENST00000640583 TRIM52Q96A61 297 aa25.84■■□□□ 1.73
MED17-228ENST00000640583 ANP32CO43423 234 aa25.82■■□□□ 1.72
MED17-228ENST00000640583 WDR97A6NE52 1622 aa25.82■■□□□ 1.72
MED17-228ENST00000640583 SETD5Q9C0A6 1442 aa25.8■■□□□ 1.72
MED17-228ENST00000640583 SIN3AQ96ST3 1273 aa25.78■■□□□ 1.72
MED17-228ENST00000640583 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
MED17-228ENST00000640583 TIMELESSQ9UNS1 1208 aa25.77■■□□□ 1.72
MED17-228ENST00000640583 MSH5O43196 834 aa25.77■■□□□ 1.72
MED17-228ENST00000640583 CADPSQ9ULU8 1353 aa25.74■■□□□ 1.71
MED17-228ENST00000640583 ARHGAP35Q9NRY4 1499 aa25.74■■□□□ 1.71
MED17-228ENST00000640583 KIF27Q86VH2 1401 aa25.7■■□□□ 1.7
MED17-228ENST00000640583 FANCIQ9NVI1 1328 aa25.7■■□□□ 1.7
MED17-228ENST00000640583 HIRIP3Q9BW71 556 aaPredicted RBP25.69■■□□□ 1.7
MED17-228ENST00000640583 ERICH6Q7L0X2 663 aa25.66■■□□□ 1.7
MED17-228ENST00000640583 CDK11AQ9UQ88 783 aaPredicted RBP25.65■■□□□ 1.7
MED17-228ENST00000640583 FAM50AQ14320 339 aaKnown RBP25.61■■□□□ 1.69
MED17-228ENST00000640583 MAP3K1Q13233 1512 aa25.61■■□□□ 1.69
MED17-228ENST00000640583 CUX1P39880 1505 aa25.59■■□□□ 1.69
MED17-228ENST00000640583 TIAM1Q13009 1591 aa25.59■■□□□ 1.69
MED17-228ENST00000640583 PHLDB1Q86UU1 1377 aa25.55■■□□□ 1.68
MED17-228ENST00000640583 LRRC9Q6ZRR7 1453 aa25.54■■□□□ 1.68
MED17-228ENST00000640583 LAMC3Q9Y6N6 1575 aa25.51■■□□□ 1.67
MED17-228ENST00000640583 HNRNPUQ00839 825 aaKnown RBP eCLIP25.5■■□□□ 1.67
MED17-228ENST00000640583 MYT1LQ9UL68 1186 aa25.49■■□□□ 1.67
MED17-228ENST00000640583 DNAJC5BQ9UF47 199 aa25.48■■□□□ 1.67
MED17-228ENST00000640583 NESP48681 1621 aa25.48■■□□□ 1.67
MED17-228ENST00000640583 IRX6P78412 446 aaPredicted RBP25.48■■□□□ 1.67
MED17-228ENST00000640583 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
MED17-228ENST00000640583 TONSLQ96HA7 1378 aa25.45■■□□□ 1.66
MED17-228ENST00000640583 ERICH6BQ5W0A0 696 aa25.45■■□□□ 1.66
MED17-228ENST00000640583 PPP4R2Q9NY27 417 aa25.38■■□□□ 1.65
MED17-228ENST00000640583 FHAD1B1AJZ9 1412 aa25.36■■□□□ 1.65
MED17-228ENST00000640583 IGF1RP08069 1367 aa25.35■■□□□ 1.65
MED17-228ENST00000640583 ATP1B4Q9UN42 357 aaPredicted RBP25.32■■□□□ 1.64
MED17-228ENST00000640583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.31■■□□□ 1.64
MED17-228ENST00000640583 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
MED17-228ENST00000640583 DEKP35659 375 aaKnown RBP25.3■■□□□ 1.64
MED17-228ENST00000640583 CARMIL1Q5VZK9 1371 aa25.27■■□□□ 1.64
MED17-228ENST00000640583 CFAP43Q8NDM7 1665 aa25.26■■□□□ 1.63
MED17-228ENST00000640583 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
MED17-228ENST00000640583 PDS5BQ9NTI5 1447 aa25.26■■□□□ 1.63
MED17-228ENST00000640583 P3H3Q8IVL6 736 aa25.23■■□□□ 1.63
MED17-228ENST00000640583 TOPBP1Q92547 1522 aa25.23■■□□□ 1.63
MED17-228ENST00000640583 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
MED17-228ENST00000640583 PCF11O94913 1555 aaKnown RBP25.21■■□□□ 1.63
MED17-228ENST00000640583 CCDC18Q5T9S5 1454 aa25.2■■□□□ 1.63
MED17-228ENST00000640583 UACAQ9BZF9 1416 aa25.2■■□□□ 1.63
MED17-228ENST00000640583 B4GALNT3Q6L9W6 998 aa25.18■■□□□ 1.62
MED17-228ENST00000640583 WASHC2AQ641Q2 1341 aa25.17■■□□□ 1.62
MED17-228ENST00000640583 URB2Q14146 1524 aaKnown RBP25.16■■□□□ 1.62
MED17-228ENST00000640583 NOP58Q9Y2X3 529 aaKnown RBP25.15■■□□□ 1.62
MED17-228ENST00000640583 HSPA5P11021 654 aaKnown RBP25.14■■□□□ 1.61
MED17-228ENST00000640583 HFM1A2PYH4 1435 aa25.13■■□□□ 1.61
MED17-228ENST00000640583 FGD6Q6ZV73 1430 aa25.13■■□□□ 1.61
MED17-228ENST00000640583 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
MED17-228ENST00000640583 FYCO1Q9BQS8 1478 aa25.12■■□□□ 1.61
MED17-228ENST00000640583 CCDC184Q52MB2 194 aa25.09■■□□□ 1.61
MED17-228ENST00000640583 CASKIN1Q8WXD9 1431 aa25.09■■□□□ 1.61
MED17-228ENST00000640583 FHOD3Q2V2M9 1422 aa25.08■■□□□ 1.61
MED17-228ENST00000640583 FAM9BQ8IZU0 186 aa25.08■■□□□ 1.6
MED17-228ENST00000640583 ZBED9Q6R2W3 1325 aa25.07■■□□□ 1.6
MED17-228ENST00000640583 EIF4G2P78344 907 aaKnown RBP eCLIP25.07■■□□□ 1.6
MED17-228ENST00000640583 NBR1Q14596 966 aa25.07■■□□□ 1.6
MED17-228ENST00000640583 KDM5BQ9UGL1 1544 aa25.07■■□□□ 1.6
MED17-228ENST00000640583 ABCA10Q8WWZ4 1543 aa25.06■■□□□ 1.6
MED17-228ENST00000640583 CNTLNQ9NXG0 1405 aa25.05■■□□□ 1.6
MED17-228ENST00000640583 PTPN23Q9H3S7 1636 aa25.05■■□□□ 1.6
MED17-228ENST00000640583 PTPRKQ15262 1439 aa25.05■■□□□ 1.6
MED17-228ENST00000640583 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.64e-7■■■□□ 16.8
MED17-228ENST00000640583 MRS2Q9HD23 443 aa25.03■■□□□ 1.6
MED17-228ENST00000640583 NCOA2Q15596 1464 aa25.03■■□□□ 1.6
MED17-228ENST00000640583 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
MED17-228ENST00000640583 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
MED17-228ENST00000640583 PAK3O75914 559 aaPredicted RBP25.02■■□□□ 1.6
MED17-228ENST00000640583 NAIPQ13075 1403 aa25.02■■□□□ 1.6
MED17-228ENST00000640583 FMN1Q68DA7 1419 aa24.98■■□□□ 1.59
MED17-228ENST00000640583 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
MED17-228ENST00000640583 EFCAB5A4FU69 1503 aa24.97■■□□□ 1.59
MED17-228ENST00000640583 MRC2Q9UBG0 1479 aa24.95■■□□□ 1.58
MED17-228ENST00000640583 ANP32AP39687 249 aaKnown RBP24.94■■□□□ 1.58
MED17-228ENST00000640583 PRKCSHP14314 528 aaPredicted RBP24.92■■□□□ 1.58
MED17-228ENST00000640583 CCDC7Q96M83 1385 aa24.92■■□□□ 1.58
MED17-228ENST00000640583 IPO9Q96P70 1041 aaKnown RBP24.91■■□□□ 1.58
MED17-228ENST00000640583 RTL5Q5HYW3 569 aaPredicted RBP24.9■■□□□ 1.58
MED17-228ENST00000640583 C11orf95C9JLR9 678 aaPredicted RBP24.9■■□□□ 1.58
MED17-228ENST00000640583 NCOA1Q15788 1441 aa24.89■■□□□ 1.57
MED17-228ENST00000640583 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
MED17-228ENST00000640583 ZBTB47Q9UFB7 747 aaPredicted RBP24.87■■□□□ 1.57
MED17-228ENST00000640583 MYOM3Q5VTT5 1437 aa24.87■■□□□ 1.57
MED17-228ENST00000640583 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
MED17-228ENST00000640583 CCDC136Q96JN2 1154 aa24.86■■□□□ 1.57
MED17-228ENST00000640583 WDR62O43379 1518 aa24.85■■□□□ 1.57
MED17-228ENST00000640583 RRP7BPQ9NSQ0 103 aa24.84■■□□□ 1.57
MED17-228ENST00000640583 SMG6Q86US8 1419 aaKnown RBP24.84■■□□□ 1.57
MED17-228ENST00000640583 L3MBTL2Q969R5 705 aa24.83■■□□□ 1.57
MED17-228ENST00000640583 CUL7Q14999 1698 aa24.81■■□□□ 1.56
MED17-228ENST00000640583 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
MED17-228ENST00000640583 AKNAQ7Z591 1439 aa24.79■■□□□ 1.56
MED17-228ENST00000640583 NUDCQ9Y266 331 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms