RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
CHD1L-211ENST00000639534 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
CHD1L-211ENST00000639534 MAP3K1Q13233 1512 aa22.22■■□□□ 1.15
CHD1L-211ENST00000639534 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
CHD1L-211ENST00000639534 AQRO60306 1485 aaKnown RBP eCLIP22.14■■□□□ 1.133e-7■■■■■ 27.9
CHD1L-211ENST00000639534 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
CHD1L-211ENST00000639534 SAMD9Q5K651 1589 aa22.1■■□□□ 1.13
CHD1L-211ENST00000639534 TIAM1Q13009 1591 aa22.08■■□□□ 1.13
CHD1L-211ENST00000639534 FMN1Q68DA7 1419 aa22.08■■□□□ 1.13
CHD1L-211ENST00000639534 FYCO1Q9BQS8 1478 aa22.08■■□□□ 1.12
CHD1L-211ENST00000639534 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
CHD1L-211ENST00000639534 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
CHD1L-211ENST00000639534 CASKIN1Q8WXD9 1431 aa22.05■■□□□ 1.12
CHD1L-211ENST00000639534 CFAP43Q8NDM7 1665 aa22.04■■□□□ 1.12
CHD1L-211ENST00000639534 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
CHD1L-211ENST00000639534 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
CHD1L-211ENST00000639534 MAGI1Q96QZ7 1491 aaPredicted RBP22.03■■□□□ 1.12
CHD1L-211ENST00000639534 IQGAP2Q13576 1575 aa22.02■■□□□ 1.12
CHD1L-211ENST00000639534 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
CHD1L-211ENST00000639534 KANK4Q5T7N3 995 aaPredicted RBP21.98■■□□□ 1.11
CHD1L-211ENST00000639534 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
CHD1L-211ENST00000639534 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
CHD1L-211ENST00000639534 P3H3Q8IVL6 736 aa21.94■■□□□ 1.1
CHD1L-211ENST00000639534 GRIN2AQ12879 1464 aa21.94■■□□□ 1.1
CHD1L-211ENST00000639534 KIAA0586Q9BVV6 1533 aa21.93■■□□□ 1.1
CHD1L-211ENST00000639534 UGGT2Q9NYU1 1516 aa21.93■■□□□ 1.1
CHD1L-211ENST00000639534 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
CHD1L-211ENST00000639534 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
CHD1L-211ENST00000639534 CCNB3Q8WWL7 1395 aa21.86■■□□□ 1.09
CHD1L-211ENST00000639534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
CHD1L-211ENST00000639534 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
CHD1L-211ENST00000639534 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
CHD1L-211ENST00000639534 HECW1Q76N89 1606 aa21.81■■□□□ 1.08
CHD1L-211ENST00000639534 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
CHD1L-211ENST00000639534 ATP1B4Q9UN42 357 aaPredicted RBP21.8■■□□□ 1.08
CHD1L-211ENST00000639534 KIAA0556O60303 1618 aa21.77■■□□□ 1.08
CHD1L-211ENST00000639534 NUP160Q12769 1436 aa21.77■■□□□ 1.08
CHD1L-211ENST00000639534 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
CHD1L-211ENST00000639534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.07
CHD1L-211ENST00000639534 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
CHD1L-211ENST00000639534 DISP1Q96F81 1524 aa21.73■■□□□ 1.07
CHD1L-211ENST00000639534 MTUS2Q5JR59 1369 aa21.73■■□□□ 1.07
CHD1L-211ENST00000639534 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
CHD1L-211ENST00000639534 LRRIQ1Q96JM4 1722 aa21.7■■□□□ 1.06
CHD1L-211ENST00000639534 SUPT6HQ7KZ85 1726 aaKnown RBP21.69■■□□□ 1.06
CHD1L-211ENST00000639534 CARMIL2Q6F5E8 1435 aa21.68■■□□□ 1.06
CHD1L-211ENST00000639534 CLSPNQ9HAW4 1339 aa21.66■■□□□ 1.06
CHD1L-211ENST00000639534 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
CHD1L-211ENST00000639534 FBLN2P98095 1184 aa21.63■■□□□ 1.05
CHD1L-211ENST00000639534 RAPGEF6Q8TEU7 1601 aa21.62■■□□□ 1.05
CHD1L-211ENST00000639534 NCOA2Q15596 1464 aa21.61■■□□□ 1.05
CHD1L-211ENST00000639534 FGD6Q6ZV73 1430 aa21.61■■□□□ 1.05
CHD1L-211ENST00000639534 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
CHD1L-211ENST00000639534 MYOM3Q5VTT5 1437 aa21.58■■□□□ 1.05
CHD1L-211ENST00000639534 JPH4Q96JJ6 628 aa21.58■■□□□ 1.05
CHD1L-211ENST00000639534 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
CHD1L-211ENST00000639534 MAGI3Q5TCQ9 1506 aa21.53■■□□□ 1.04
CHD1L-211ENST00000639534 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
CHD1L-211ENST00000639534 CDK13Q14004 1512 aaKnown RBP21.52■■□□□ 1.04
CHD1L-211ENST00000639534 CDK11AQ9UQ88 783 aaPredicted RBP21.52■■□□□ 1.04
CHD1L-211ENST00000639534 SETD5Q9C0A6 1442 aa21.52■■□□□ 1.04
CHD1L-211ENST00000639534 CHD1O14646 1710 aa21.51■■□□□ 1.03
CHD1L-211ENST00000639534 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
CHD1L-211ENST00000639534 MIA2Q96PC5 1412 aa21.49■■□□□ 1.03
CHD1L-211ENST00000639534 TCOF1Q13428 1488 aaKnown RBP21.48■■□□□ 1.03
CHD1L-211ENST00000639534 ITGAEP38570 1179 aa21.48■■□□□ 1.03
CHD1L-211ENST00000639534 PTPN23Q9H3S7 1636 aa21.47■■□□□ 1.03
CHD1L-211ENST00000639534 RAB3GAP2Q9H2M9 1393 aa21.46■■□□□ 1.03
CHD1L-211ENST00000639534 ABCA8O94911 1581 aa21.44■■□□□ 1.02
CHD1L-211ENST00000639534 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
CHD1L-211ENST00000639534 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
CHD1L-211ENST00000639534 TROQ12816 1431 aaPredicted RBP21.41■■□□□ 1.02
CHD1L-211ENST00000639534 PRG4Q92954 1404 aaPredicted RBP21.41■■□□□ 1.02
CHD1L-211ENST00000639534 ADCY10Q96PN6 1610 aa21.39■■□□□ 1.01
CHD1L-211ENST00000639534 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
CHD1L-211ENST00000639534 PTPRGP23470 1445 aa21.35■■□□□ 1.01
CHD1L-211ENST00000639534 AKNAQ7Z591 1439 aa21.35■■□□□ 1.01
CHD1L-211ENST00000639534 ITSN2Q9NZM3 1697 aa21.34■■□□□ 1.01
CHD1L-211ENST00000639534 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
CHD1L-211ENST00000639534 CLASP1Q7Z460 1538 aa21.31■■□□□ 1
CHD1L-211ENST00000639534 ARID3CA6NKF2 412 aa21.29■■□□□ 1
CHD1L-211ENST00000639534 PTPRKQ15262 1439 aa21.28■■□□□ 1
CHD1L-211ENST00000639534 ATP10BO94823 1461 aa21.27■■□□□ 1
CHD1L-211ENST00000639534 KIF14Q15058 1648 aa21.26■□□□□ 0.99
CHD1L-211ENST00000639534 GCC2Q8IWJ2 1684 aa21.26■□□□□ 0.99
CHD1L-211ENST00000639534 PLEKHD1A6NEE1 506 aa21.26■□□□□ 0.99
CHD1L-211ENST00000639534 NAIPQ13075 1403 aa21.25■□□□□ 0.99
CHD1L-211ENST00000639534 UACAQ9BZF9 1416 aa21.25■□□□□ 0.99
CHD1L-211ENST00000639534 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
CHD1L-211ENST00000639534 DNMT1P26358 1616 aaKnown RBP21.23■□□□□ 0.99
CHD1L-211ENST00000639534 ROCK1Q13464 1354 aa21.22■□□□□ 0.99
CHD1L-211ENST00000639534 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
CHD1L-211ENST00000639534 GPATCH8Q9UKJ3 1502 aaKnown RBP21.2■□□□□ 0.98
CHD1L-211ENST00000639534 DAPK1P53355 1430 aa21.2■□□□□ 0.98
CHD1L-211ENST00000639534 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
CHD1L-211ENST00000639534 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
CHD1L-211ENST00000639534 ABCC10Q5T3U5 1492 aa21.17■□□□□ 0.98
CHD1L-211ENST00000639534 CAMSAP2Q08AD1 1489 aa21.16■□□□□ 0.98
CHD1L-211ENST00000639534 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
CHD1L-211ENST00000639534 UHRF1BP1LA0JNW5 1464 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms