RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
PPFIA1-225ENST00000638133 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
PPFIA1-225ENST00000638133 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
PPFIA1-225ENST00000638133 KIAA0586Q9BVV6 1533 aa25.24■■□□□ 1.63
PPFIA1-225ENST00000638133 RAPGEF2Q9Y4G8 1499 aa25.16■■□□□ 1.62
PPFIA1-225ENST00000638133 IQGAP2Q13576 1575 aa25.09■■□□□ 1.61
PPFIA1-225ENST00000638133 CARMIL2Q6F5E8 1435 aa25.05■■□□□ 1.6
PPFIA1-225ENST00000638133 NPM1P06748 294 aaKnown RBP eCLIP25.01■■□□□ 1.59
PPFIA1-225ENST00000638133 TTBK1Q5TCY1 1321 aaPredicted RBP25■■□□□ 1.59
PPFIA1-225ENST00000638133 CTTNBP2Q8WZ74 1663 aa24.96■■□□□ 1.59
PPFIA1-225ENST00000638133 PRXQ9BXM0 1461 aa24.96■■□□□ 1.59
PPFIA1-225ENST00000638133 PTPRGP23470 1445 aa24.95■■□□□ 1.59
PPFIA1-225ENST00000638133 TNIKQ9UKE5 1360 aa24.94■■□□□ 1.58
PPFIA1-225ENST00000638133 CSRNP3Q8WYN3 585 aa24.94■■□□□ 1.58
PPFIA1-225ENST00000638133 EEA1Q15075 1411 aa24.92■■□□□ 1.58
PPFIA1-225ENST00000638133 UGGT2Q9NYU1 1516 aa24.91■■□□□ 1.58
PPFIA1-225ENST00000638133 ADCY10Q96PN6 1610 aa24.9■■□□□ 1.58
PPFIA1-225ENST00000638133 DISP1Q96F81 1524 aa24.87■■□□□ 1.57
PPFIA1-225ENST00000638133 FAM9AQ8IZU1 332 aaPredicted RBP24.85■■□□□ 1.57
PPFIA1-225ENST00000638133 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
PPFIA1-225ENST00000638133 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
PPFIA1-225ENST00000638133 GOLGA3Q08378 1498 aa24.82■■□□□ 1.56
PPFIA1-225ENST00000638133 MAPKBP1O60336 1514 aa24.8■■□□□ 1.56
PPFIA1-225ENST00000638133 UACAQ9BZF9 1416 aa24.77■■□□□ 1.56
PPFIA1-225ENST00000638133 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
PPFIA1-225ENST00000638133 ABCC2Q92887 1545 aa24.75■■□□□ 1.55
PPFIA1-225ENST00000638133 FAM69CQ0P6D2 419 aa24.74■■□□□ 1.55
PPFIA1-225ENST00000638133 UHRF1BP1LA0JNW5 1464 aa24.73■■□□□ 1.55
PPFIA1-225ENST00000638133 ABCC10Q5T3U5 1492 aa24.72■■□□□ 1.55
PPFIA1-225ENST00000638133 DIP2BQ9P265 1576 aa24.67■■□□□ 1.54
PPFIA1-225ENST00000638133 KIF21BO75037 1637 aa24.66■■□□□ 1.54
PPFIA1-225ENST00000638133 P3H3Q8IVL6 736 aa24.64■■□□□ 1.54
PPFIA1-225ENST00000638133 RANGAP1P46060 587 aaPredicted RBP24.63■■□□□ 1.53
PPFIA1-225ENST00000638133 PLB1Q6P1J6 1458 aa24.62■■□□□ 1.53
PPFIA1-225ENST00000638133 ASXL2Q76L83 1435 aa24.61■■□□□ 1.53
PPFIA1-225ENST00000638133 KDM5BQ9UGL1 1544 aa24.61■■□□□ 1.53
PPFIA1-225ENST00000638133 ZCCHC11Q5TAX3 1644 aaKnown RBP24.6■■□□□ 1.53
PPFIA1-225ENST00000638133 EHMT2Q96KQ7 1210 aa24.59■■□□□ 1.53
PPFIA1-225ENST00000638133 SAMD9Q5K651 1589 aa24.57■■□□□ 1.52
PPFIA1-225ENST00000638133 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
PPFIA1-225ENST00000638133 ABCA8O94911 1581 aa24.55■■□□□ 1.52
PPFIA1-225ENST00000638133 TSPOAP1O95153 1857 aa24.54■■□□□ 1.52
PPFIA1-225ENST00000638133 GLI2P10070 1586 aa24.48■■□□□ 1.51
PPFIA1-225ENST00000638133 WDR7Q9Y4E6 1490 aa24.46■■□□□ 1.51
PPFIA1-225ENST00000638133 EFCAB5A4FU69 1503 aa24.45■■□□□ 1.51
PPFIA1-225ENST00000638133 EPRSP07814 1512 aaKnown RBP24.45■■□□□ 1.51
PPFIA1-225ENST00000638133 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
PPFIA1-225ENST00000638133 ARID3CA6NKF2 412 aa24.44■■□□□ 1.5
PPFIA1-225ENST00000638133 RAPGEF6Q8TEU7 1601 aa24.43■■□□□ 1.5
PPFIA1-225ENST00000638133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
PPFIA1-225ENST00000638133 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
PPFIA1-225ENST00000638133 KCNH8Q96L42 1107 aa24.4■■□□□ 1.5
PPFIA1-225ENST00000638133 KDM6BO15054 1643 aa24.39■■□□□ 1.5
PPFIA1-225ENST00000638133 MAP3K4Q9Y6R4 1608 aa24.37■■□□□ 1.49
PPFIA1-225ENST00000638133 ATP10BO94823 1461 aa24.36■■□□□ 1.49
PPFIA1-225ENST00000638133 TEX14Q8IWB6 1497 aa24.34■■□□□ 1.49
PPFIA1-225ENST00000638133 PPRC1Q5VV67 1664 aaKnown RBP24.33■■□□□ 1.49
PPFIA1-225ENST00000638133 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
PPFIA1-225ENST00000638133 NUP153P49790 1475 aaKnown RBP24.29■■□□□ 1.48
PPFIA1-225ENST00000638133 CD109Q6YHK3 1445 aa24.28■■□□□ 1.48
PPFIA1-225ENST00000638133 FMN1Q68DA7 1419 aa24.26■■□□□ 1.47
PPFIA1-225ENST00000638133 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
PPFIA1-225ENST00000638133 ATP1B4Q9UN42 357 aaPredicted RBP24.25■■□□□ 1.47
PPFIA1-225ENST00000638133 PLEKHD1A6NEE1 506 aa24.22■■□□□ 1.47
PPFIA1-225ENST00000638133 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
PPFIA1-225ENST00000638133 MAGI3Q5TCQ9 1506 aa24.2■■□□□ 1.46
PPFIA1-225ENST00000638133 HECW1Q76N89 1606 aa24.17■■□□□ 1.46
PPFIA1-225ENST00000638133 ABCA9Q8IUA7 1624 aa24.16■■□□□ 1.46
PPFIA1-225ENST00000638133 CDK13Q14004 1512 aaKnown RBP24.12■■□□□ 1.45
PPFIA1-225ENST00000638133 COL17A1Q9UMD9 1497 aaPredicted RBP24.11■■□□□ 1.45
PPFIA1-225ENST00000638133 CDK11AQ9UQ88 783 aaPredicted RBP24.1■■□□□ 1.45
PPFIA1-225ENST00000638133 CLIP1P30622 1438 aa24.08■■□□□ 1.44
PPFIA1-225ENST00000638133 PHLDB1Q86UU1 1377 aa24.04■■□□□ 1.44
PPFIA1-225ENST00000638133 NEO1Q92859 1461 aa24.01■■□□□ 1.43
PPFIA1-225ENST00000638133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.43
PPFIA1-225ENST00000638133 ARAP3Q8WWN8 1544 aa24■■□□□ 1.43
PPFIA1-225ENST00000638133 CASKIN1Q8WXD9 1431 aa24■■□□□ 1.43
PPFIA1-225ENST00000638133 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
PPFIA1-225ENST00000638133 CCDC18Q5T9S5 1454 aa23.98■■□□□ 1.43
PPFIA1-225ENST00000638133 TTC37Q6PGP7 1564 aa23.97■■□□□ 1.43
PPFIA1-225ENST00000638133 CFAP74Q9C0B2 1584 aa23.96■■□□□ 1.43
PPFIA1-225ENST00000638133 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
PPFIA1-225ENST00000638133 FYCO1Q9BQS8 1478 aa23.94■■□□□ 1.42
PPFIA1-225ENST00000638133 KIF14Q15058 1648 aa23.94■■□□□ 1.42
PPFIA1-225ENST00000638133 FANCAO15360 1455 aa23.94■■□□□ 1.42
PPFIA1-225ENST00000638133 TROQ12816 1431 aaPredicted RBP23.93■■□□□ 1.42
PPFIA1-225ENST00000638133 RAPGEF3O95398 923 aa23.9■■□□□ 1.42
PPFIA1-225ENST00000638133 CEP162Q5TB80 1403 aa23.9■■□□□ 1.42
PPFIA1-225ENST00000638133 AKNAQ7Z591 1439 aa23.9■■□□□ 1.42
PPFIA1-225ENST00000638133 MYO5CQ9NQX4 1742 aa23.89■■□□□ 1.41
PPFIA1-225ENST00000638133 KDM4FA0A1W2PPD8 638 aa23.88■■□□□ 1.41
PPFIA1-225ENST00000638133 PLCH2O75038 1416 aa23.87■■□□□ 1.41
PPFIA1-225ENST00000638133 DENND4BO75064 1496 aaPredicted RBP23.86■■□□□ 1.41
PPFIA1-225ENST00000638133 ADGRL1O94910 1474 aa23.85■■□□□ 1.41
PPFIA1-225ENST00000638133 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
PPFIA1-225ENST00000638133 EFCAB2Q5VUJ9 269 aa23.84■■□□□ 1.41
PPFIA1-225ENST00000638133 ARHGAP5Q13017 1502 aa23.8■■□□□ 1.4
PPFIA1-225ENST00000638133 FRMPD1Q5SYB0 1578 aa23.79■■□□□ 1.4
PPFIA1-225ENST00000638133 RICTORQ6R327 1708 aa23.78■■□□□ 1.4
PPFIA1-225ENST00000638133 SCAPERQ9BY12 1400 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms