RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 FAM9BQ8IZU0 186 aa7.28□□□□□ -1.24
TCF4-288ENST00000637923 PHF23Q9BUL5 403 aaPredicted RBP7.27□□□□□ -1.25
TCF4-288ENST00000637923 LAS1LQ9Y4W2 734 aaKnown RBP7.25□□□□□ -1.25
TCF4-288ENST00000637923 WDR43Q15061 677 aaKnown RBP eCLIP7.25□□□□□ -1.25
TCF4-288ENST00000637923 ISY1Q9ULR0 285 aaKnown RBP7.24□□□□□ -1.25
TCF4-288ENST00000637923 CLSTN1O94985 981 aa7.23□□□□□ -1.25
TCF4-288ENST00000637923 AMER1Q5JTC6 1135 aaPredicted RBP7.22□□□□□ -1.25
TCF4-288ENST00000637923 RRP7BPQ9NSQ0 103 aa7.22□□□□□ -1.25
TCF4-288ENST00000637923 TNNT2P45379 298 aaPredicted RBP7.22□□□□□ -1.25
TCF4-288ENST00000637923 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
TCF4-288ENST00000637923 ZNF330Q9Y3S2 320 aaPredicted RBP7.21□□□□□ -1.25
TCF4-288ENST00000637923 POGKQ9P215 609 aa7.21□□□□□ -1.26
TCF4-288ENST00000637923 TONSLQ96HA7 1378 aa7.21□□□□□ -1.26
TCF4-288ENST00000637923 GOLGA2Q08379 1002 aa7.21□□□□□ -1.26
TCF4-288ENST00000637923 PAK3O75914 559 aaPredicted RBP7.2□□□□□ -1.26
TCF4-288ENST00000637923 SAFB2Q14151 953 aaKnown RBP eCLIP7.2□□□□□ -1.26
TCF4-288ENST00000637923 CSRNP3Q8WYN3 585 aa7.2□□□□□ -1.26
TCF4-288ENST00000637923 KLHL34Q8N239 644 aa7.2□□□□□ -1.26
TCF4-288ENST00000637923 MYH16Q9H6N6 1097 aa7.2□□□□□ -1.26
TCF4-288ENST00000637923 PLEKHD1A6NEE1 506 aa7.19□□□□□ -1.26
TCF4-288ENST00000637923 NEUROD2Q15784 382 aa7.17□□□□□ -1.26
TCF4-288ENST00000637923 MEX3CQ5U5Q3 659 aaKnown RBP7.17□□□□□ -1.26
TCF4-288ENST00000637923 UPF2Q9HAU5 1272 aaKnown RBP7.16□□□□□ -1.26
TCF4-288ENST00000637923 MSH5O43196 834 aa7.16□□□□□ -1.26
TCF4-288ENST00000637923 MTUS2Q5JR59 1369 aa7.16□□□□□ -1.26
TCF4-288ENST00000637923 CSB-PGBD3P0DP91 1061 aa7.16□□□□□ -1.26
TCF4-288ENST00000637923 DDX10Q13206 875 aaKnown RBP7.16□□□□□ -1.26
TCF4-288ENST00000637923 NAP1L2Q9ULW6 460 aaPredicted RBP7.16□□□□□ -1.26
TCF4-288ENST00000637923 ANP32BQ92688 251 aaKnown RBP7.15□□□□□ -1.26
TCF4-288ENST00000637923 HNRNPUQ00839 825 aaKnown RBP eCLIP7.15□□□□□ -1.26
TCF4-288ENST00000637923 STK26Q9P289 416 aa7.15□□□□□ -1.27
TCF4-288ENST00000637923 ANP32AP39687 249 aaKnown RBP7.14□□□□□ -1.27
TCF4-288ENST00000637923 OS9Q13438 667 aaPredicted RBP7.13□□□□□ -1.27
TCF4-288ENST00000637923 GGT6Q6P531 493 aa7.13□□□□□ -1.27
TCF4-288ENST00000637923 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.12□□□□□ -1.27
TCF4-288ENST00000637923 TMX4Q9H1E5 349 aaPredicted RBP7.12□□□□□ -1.27
TCF4-288ENST00000637923 G3V3G9 751 aa7.12□□□□□ -1.27
TCF4-288ENST00000637923 DCAF8Q5TAQ9 597 aa7.12□□□□□ -1.27
TCF4-288ENST00000637923 IRX6P78412 446 aaPredicted RBP7.11□□□□□ -1.27
TCF4-288ENST00000637923 U2SURPO15042 1029 aaKnown RBP7.1□□□□□ -1.27
TCF4-288ENST00000637923 ANO8Q9HCE9 1232 aaPredicted RBP7.1□□□□□ -1.27
TCF4-288ENST00000637923 NUTM2DQ5VT03 806 aaPredicted RBP7.1□□□□□ -1.27
TCF4-288ENST00000637923 CFDP1Q9UEE9 299 aaPredicted RBP7.1□□□□□ -1.27
TCF4-288ENST00000637923 NUTM2FA1L443 756 aa7.09□□□□□ -1.27
TCF4-288ENST00000637923 EIF4G1Q04637 1599 aaKnown RBP7.09□□□□□ -1.27
TCF4-288ENST00000637923 PRM3Q9NNZ6 103 aa7.09□□□□□ -1.27
TCF4-288ENST00000637923 SRPK2P78362 688 aaKnown RBP7.09□□□□□ -1.27
TCF4-288ENST00000637923 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.28
TCF4-288ENST00000637923 FKBP8Q14318 412 aa7.08□□□□□ -1.28
TCF4-288ENST00000637923 CFAP53Q96M91 514 aa7.07□□□□□ -1.28
TCF4-288ENST00000637923 MRS2Q9HD23 443 aa7.07□□□□□ -1.28
TCF4-288ENST00000637923 MAPK8IP3Q9UPT6 1336 aa7.07□□□□□ -1.28
TCF4-288ENST00000637923 DCAF8L1A6NGE4 600 aa7.07□□□□□ -1.28
TCF4-288ENST00000637923 FGD1P98174 961 aa7.06□□□□□ -1.28
TCF4-288ENST00000637923 NCLP19338 710 aaKnown RBP7.06□□□□□ -1.28
TCF4-288ENST00000637923 CC2D1BQ5T0F9 858 aaKnown RBP7.06□□□□□ -1.28
TCF4-288ENST00000637923 CYB5RLQ6IPT4 315 aa7.06□□□□□ -1.28
TCF4-288ENST00000637923 NBR1Q14596 966 aa7.05□□□□□ -1.28
TCF4-288ENST00000637923 FTSJ3Q8IY81 847 aaKnown RBP7.05□□□□□ -1.28
TCF4-288ENST00000637923 KNSTRNQ9Y448 316 aa7.05□□□□□ -1.28
TCF4-288ENST00000637923 KRI1Q8N9T8 703 aaKnown RBP7.05□□□□□ -1.28
TCF4-288ENST00000637923 HDGFP51858 240 aaKnown RBP7.05□□□□□ -1.28
TCF4-288ENST00000637923 ZRSR1Q15695 479 aaKnown RBP7.05□□□□□ -1.28
TCF4-288ENST00000637923 CCDC136Q96JN2 1154 aa7.05□□□□□ -1.28
TCF4-288ENST00000637923 PPP1R1BQ9UD71 204 aaPredicted RBP7.04□□□□□ -1.28
TCF4-288ENST00000637923 CHMP3Q9Y3E7 222 aa7.04□□□□□ -1.28
TCF4-288ENST00000637923 KCNJ4P48050 445 aa7.04□□□□□ -1.28
TCF4-288ENST00000637923 LTV1Q96GA3 475 aaPredicted RBP7.03□□□□□ -1.28
TCF4-288ENST00000637923 EVA1CP58658 441 aa7.03□□□□□ -1.28
TCF4-288ENST00000637923 PDE4CQ08493 712 aa7.03□□□□□ -1.28
TCF4-288ENST00000637923 FRAT1Q92837 279 aaPredicted RBP7.03□□□□□ -1.28
TCF4-288ENST00000637923 EIF5BO60841 1220 aaKnown RBP7.02□□□□□ -1.29
TCF4-288ENST00000637923 CARD11Q9BXL7 1154 aa7.02□□□□□ -1.29
TCF4-288ENST00000637923 EIF4G2P78344 907 aaKnown RBP eCLIP7.01□□□□□ -1.29
TCF4-288ENST00000637923 APBB1O00213 710 aa7.01□□□□□ -1.29
TCF4-288ENST00000637923 GTF2E1P29083 439 aaPredicted RBP7.01□□□□□ -1.29
TCF4-288ENST00000637923 CASC1Q6TDU7 716 aa7.01□□□□□ -1.29
TCF4-288ENST00000637923 RTF1Q92541 710 aaKnown RBP7.01□□□□□ -1.29
TCF4-288ENST00000637923 FBXW7Q969H0 707 aa7□□□□□ -1.29
TCF4-288ENST00000637923 SYTL4Q96C24 671 aaPredicted RBP7□□□□□ -1.29
TCF4-288ENST00000637923 ZCCHC6Q5VYS8 1495 aaKnown RBP7□□□□□ -1.29
TCF4-288ENST00000637923 NUDCQ9Y266 331 aa7□□□□□ -1.29
TCF4-288ENST00000637923 KANK1Q14678 1352 aa7□□□□□ -1.29
TCF4-288ENST00000637923 PLCB2Q00722 1185 aa6.99□□□□□ -1.29
TCF4-288ENST00000637923 EID1Q9Y6B2 187 aa6.99□□□□□ -1.29
TCF4-288ENST00000637923 RAD21O60216 631 aa6.98□□□□□ -1.29
TCF4-288ENST00000637923 VPS53Q5VIR6 699 aa6.98□□□□□ -1.29
TCF4-288ENST00000637923 FRAT2O75474 233 aaPredicted RBP6.98□□□□□ -1.29
TCF4-288ENST00000637923 TAF7LQ5H9L4 462 aa6.98□□□□□ -1.29
TCF4-288ENST00000637923 RB1CC1Q8TDY2 1594 aa6.97□□□□□ -1.29
TCF4-288ENST00000637923 NGDNQ8NEJ9 315 aaKnown RBP6.97□□□□□ -1.29
TCF4-288ENST00000637923 DCAF11Q8TEB1 546 aa6.97□□□□□ -1.29
TCF4-288ENST00000637923 PIP4K2BP78356 416 aa6.96□□□□□ -1.3
TCF4-288ENST00000637923 WWC1Q8IX03 1113 aa6.96□□□□□ -1.3
TCF4-288ENST00000637923 CWC22Q9HCG8 908 aaKnown RBP6.96□□□□□ -1.3
TCF4-288ENST00000637923 BAZ1BQ9UIG0 1483 aaKnown RBP6.96□□□□□ -1.3
TCF4-288ENST00000637923 SAMD1Q6SPF0 538 aaPredicted RBP6.96□□□□□ -1.3
TCF4-288ENST00000637923 GNL2Q13823 731 aaKnown RBP6.95□□□□□ -1.3
TCF4-288ENST00000637923 CDCA8Q53HL2 280 aa6.95□□□□□ -1.3
TCF4-288ENST00000637923 GORABQ5T7V8 394 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms