RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
CHD2-223ENST00000636306 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
CHD2-223ENST00000636306 IGF1RP08069 1367 aa15.71■□□□□ 0.11
CHD2-223ENST00000636306 ARAP1Q96P48 1450 aa15.7■□□□□ 0.1
CHD2-223ENST00000636306 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
CHD2-223ENST00000636306 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
CHD2-223ENST00000636306 MIER1Q8N108 512 aa15.68■□□□□ 0.1
CHD2-223ENST00000636306 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
CHD2-223ENST00000636306 CTTNBP2Q8WZ74 1663 aa15.67■□□□□ 0.1
CHD2-223ENST00000636306 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
CHD2-223ENST00000636306 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
CHD2-223ENST00000636306 ARHGAP35Q9NRY4 1499 aa15.62■□□□□ 0.09
CHD2-223ENST00000636306 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
CHD2-223ENST00000636306 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
CHD2-223ENST00000636306 MAP3K1Q13233 1512 aa15.58■□□□□ 0.09
CHD2-223ENST00000636306 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.08
CHD2-223ENST00000636306 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
CHD2-223ENST00000636306 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
CHD2-223ENST00000636306 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
CHD2-223ENST00000636306 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
CHD2-223ENST00000636306 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
CHD2-223ENST00000636306 CFAP43Q8NDM7 1665 aa15.53■□□□□ 0.08
CHD2-223ENST00000636306 TIAM1Q13009 1591 aa15.51■□□□□ 0.07
CHD2-223ENST00000636306 WDR62O43379 1518 aa15.5■□□□□ 0.07
CHD2-223ENST00000636306 AQRO60306 1485 aaKnown RBP eCLIP15.47■□□□□ 0.072e-8■■■■□ 20.9
CHD2-223ENST00000636306 FYCO1Q9BQS8 1478 aa15.47■□□□□ 0.07
CHD2-223ENST00000636306 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
CHD2-223ENST00000636306 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.06
CHD2-223ENST00000636306 ADAMTS12P58397 1594 aa15.44■□□□□ 0.06
CHD2-223ENST00000636306 SAMD9Q5K651 1589 aa15.44■□□□□ 0.06
CHD2-223ENST00000636306 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
CHD2-223ENST00000636306 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
CHD2-223ENST00000636306 RRBP1Q9P2E9 1410 aaKnown RBP15.42■□□□□ 0.06
CHD2-223ENST00000636306 THOC2Q8NI27 1593 aaKnown RBP15.42■□□□□ 0.06
CHD2-223ENST00000636306 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
CHD2-223ENST00000636306 CASKIN1Q8WXD9 1431 aa15.4■□□□□ 0.06
CHD2-223ENST00000636306 RBM19Q9Y4C8 960 aaKnown RBP15.39■□□□□ 0.05
CHD2-223ENST00000636306 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
CHD2-223ENST00000636306 LRRC9Q6ZRR7 1453 aa15.38■□□□□ 0.05
CHD2-223ENST00000636306 FHOD3Q2V2M9 1422 aa15.36■□□□□ 0.05
CHD2-223ENST00000636306 IQGAP2Q13576 1575 aa15.36■□□□□ 0.05
CHD2-223ENST00000636306 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
CHD2-223ENST00000636306 CCNB3Q8WWL7 1395 aa15.34■□□□□ 0.05
CHD2-223ENST00000636306 KANK4Q5T7N3 995 aaPredicted RBP15.33■□□□□ 0.04
CHD2-223ENST00000636306 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.04
CHD2-223ENST00000636306 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
CHD2-223ENST00000636306 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
CHD2-223ENST00000636306 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
CHD2-223ENST00000636306 HECW1Q76N89 1606 aa15.29■□□□□ 0.04
CHD2-223ENST00000636306 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
CHD2-223ENST00000636306 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.04
CHD2-223ENST00000636306 EHBP1L1Q8N3D4 1523 aa15.26■□□□□ 0.03
CHD2-223ENST00000636306 UGGT2Q9NYU1 1516 aa15.26■□□□□ 0.03
CHD2-223ENST00000636306 MSH5O43196 834 aa15.25■□□□□ 0.03
CHD2-223ENST00000636306 SUPT6HQ7KZ85 1726 aaKnown RBP15.24■□□□□ 0.03
CHD2-223ENST00000636306 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
CHD2-223ENST00000636306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHD2-223ENST00000636306 P3H3Q8IVL6 736 aa15.23■□□□□ 0.03
CHD2-223ENST00000636306 KIAA0586Q9BVV6 1533 aa15.22■□□□□ 0.03
CHD2-223ENST00000636306 GRIN2AQ12879 1464 aa15.21■□□□□ 0.03
CHD2-223ENST00000636306 LRRIQ1Q96JM4 1722 aa15.21■□□□□ 0.03
CHD2-223ENST00000636306 UBE2Q2Q8WVN8 375 aa15.2■□□□□ 0.02
CHD2-223ENST00000636306 ANO8Q9HCE9 1232 aaPredicted RBP15.2■□□□□ 0.02
CHD2-223ENST00000636306 MTUS2Q5JR59 1369 aa15.19■□□□□ 0.02
CHD2-223ENST00000636306 DEKP35659 375 aaKnown RBP15.19■□□□□ 0.02
CHD2-223ENST00000636306 ATP1B4Q9UN42 357 aaPredicted RBP15.19■□□□□ 0.02
CHD2-223ENST00000636306 KIAA0556O60303 1618 aa15.18■□□□□ 0.02
CHD2-223ENST00000636306 SYNJ2O15056 1496 aa15.18■□□□□ 0.02
CHD2-223ENST00000636306 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
CHD2-223ENST00000636306 FKBP8Q14318 412 aa15.16■□□□□ 0.02
CHD2-223ENST00000636306 NEFLP07196 543 aa15.15■□□□□ 0.02
CHD2-223ENST00000636306 DHX57Q6P158 1386 aaKnown RBP15.14■□□□□ 0.01
CHD2-223ENST00000636306 FGD6Q6ZV73 1430 aa15.14■□□□□ 0.01
CHD2-223ENST00000636306 MYOM3Q5VTT5 1437 aa15.11■□□□□ 0.01
CHD2-223ENST00000636306 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
CHD2-223ENST00000636306 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
CHD2-223ENST00000636306 EPRSP07814 1512 aaKnown RBP15.1■□□□□ 0.01
CHD2-223ENST00000636306 BCANQ96GW7 911 aa15.1■□□□□ 0.01
CHD2-223ENST00000636306 RAPGEF6Q8TEU7 1601 aa15.1■□□□□ 0.01
CHD2-223ENST00000636306 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
CHD2-223ENST00000636306 CEP170Q5SW79 1584 aa15.09■□□□□ 0.01
CHD2-223ENST00000636306 DISP1Q96F81 1524 aa15.09■□□□□ 0.01
CHD2-223ENST00000636306 FAM50AQ14320 339 aaKnown RBP15.08■□□□□ 0
CHD2-223ENST00000636306 NUP160Q12769 1436 aa15.07■□□□□ 0
CHD2-223ENST00000636306 RAB3GAP2Q9H2M9 1393 aa15.07■□□□□ 0
CHD2-223ENST00000636306 PTPN23Q9H3S7 1636 aa15.06■□□□□ 0
CHD2-223ENST00000636306 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
CHD2-223ENST00000636306 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
CHD2-223ENST00000636306 ITGAEP38570 1179 aa15.03■□□□□ -0
CHD2-223ENST00000636306 TCOF1Q13428 1488 aaKnown RBP15.03■□□□□ -0
CHD2-223ENST00000636306 MAGI3Q5TCQ9 1506 aa15.02□□□□□ -0.01
CHD2-223ENST00000636306 MIA2Q96PC5 1412 aa15.02□□□□□ -0.01
CHD2-223ENST00000636306 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
CHD2-223ENST00000636306 CDK13Q14004 1512 aaKnown RBP15.01□□□□□ -0.01
CHD2-223ENST00000636306 CDK11AQ9UQ88 783 aaPredicted RBP15.01□□□□□ -0.01
CHD2-223ENST00000636306 GCC2Q8IWJ2 1684 aa15□□□□□ -0.01
CHD2-223ENST00000636306 ITSN2Q9NZM3 1697 aa15□□□□□ -0.01
CHD2-223ENST00000636306 HFM1A2PYH4 1435 aa14.99□□□□□ -0.01
CHD2-223ENST00000636306 AKNAQ7Z591 1439 aa14.99□□□□□ -0.01
CHD2-223ENST00000636306 NUP153P49790 1475 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms