RNA–Protein interactions for RNA: ENST00000635865.1

ATRX-220, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-220ENST00000635865 ASTLQ6HA08 431 aaPredicted RBP5.48□□□□□ -1.53
ATRX-220ENST00000635865 PHF12Q96QT6 1004 aa5.48□□□□□ -1.53
ATRX-220ENST00000635865 CREBZFQ9NS37 354 aa5.48□□□□□ -1.53
ATRX-220ENST00000635865 C7P10643 843 aa5.47□□□□□ -1.53
ATRX-220ENST00000635865 CDAN1Q8IWY9 1227 aa5.47□□□□□ -1.53
ATRX-220ENST00000635865 ATMINO43313 823 aaPredicted RBP5.46□□□□□ -1.54
ATRX-220ENST00000635865 SLC39A7Q92504 469 aa5.46□□□□□ -1.54
ATRX-220ENST00000635865 POTEFA5A3E0 1075 aa5.41□□□□□ -1.54
ATRX-220ENST00000635865 MMRN1Q13201 1228 aa5.41□□□□□ -1.54
ATRX-220ENST00000635865 SCUBE2Q9NQ36 999 aa5.41□□□□□ -1.54
ATRX-220ENST00000635865 MS4A3Q96HJ5 214 aa5.39□□□□□ -1.55
ATRX-220ENST00000635865 PAK3O75914 559 aaPredicted RBP5.37□□□□□ -1.55
ATRX-220ENST00000635865 SPNS2Q8IVW8 549 aa5.37□□□□□ -1.55
ATRX-220ENST00000635865 ATN1P54259 1190 aaPredicted RBP5.36□□□□□ -1.55
ATRX-220ENST00000635865 MNX1P50219 401 aaPredicted RBP5.35□□□□□ -1.55
ATRX-220ENST00000635865 ST18O60284 1047 aa5.32□□□□□ -1.56
ATRX-220ENST00000635865 STAG3Q9UJ98 1225 aa5.3□□□□□ -1.56
ATRX-220ENST00000635865 COLQQ9Y215 455 aaPredicted RBP5.29□□□□□ -1.56
ATRX-220ENST00000635865 NPM1P06748 294 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATRX-220ENST00000635865 BMP2KQ9NSY1 1161 aaPredicted RBP5.28□□□□□ -1.56
ATRX-220ENST00000635865 TRPC6Q9Y210 931 aa5.26□□□□□ -1.57
ATRX-220ENST00000635865 CCDC61Q9Y6R9 512 aa5.25□□□□□ -1.57
ATRX-220ENST00000635865 KIF12Q96FN5 646 aa5.24□□□□□ -1.57
ATRX-220ENST00000635865 TIE1P35590 1138 aa5.22□□□□□ -1.57
ATRX-220ENST00000635865 SLAIN1Q8ND83 568 aa5.22□□□□□ -1.57
ATRX-220ENST00000635865 FKBP8Q14318 412 aa5.21□□□□□ -1.58
ATRX-220ENST00000635865 TMEM121BQ9BXQ6 578 aaPredicted RBP5.21□□□□□ -1.58
ATRX-220ENST00000635865 TTLL13PA6NNM8 815 aa5.19□□□□□ -1.58
ATRX-220ENST00000635865 SEC24BO95487 1268 aa5.19□□□□□ -1.58
ATRX-220ENST00000635865 IER5LQ5T953 404 aa5.18□□□□□ -1.58
ATRX-220ENST00000635865 TSPYL2Q9H2G4 693 aaPredicted RBP5.18□□□□□ -1.58
ATRX-220ENST00000635865 KRTAP3-3Q9BYR6 98 aa5.17□□□□□ -1.58
ATRX-220ENST00000635865 KRTAP3-2Q9BYR7 98 aa5.17□□□□□ -1.58
ATRX-220ENST00000635865 MAP3K13O43283 966 aa5.16□□□□□ -1.58
ATRX-220ENST00000635865 MARVELD3Q96A59 401 aa5.15□□□□□ -1.59
ATRX-220ENST00000635865 TRIM35Q9UPQ4 493 aa5.14□□□□□ -1.59
ATRX-220ENST00000635865 POTEB3A0JP26 581 aa5.13□□□□□ -1.59
ATRX-220ENST00000635865 POTEBQ6S5H4 581 aa5.13□□□□□ -1.59
ATRX-220ENST00000635865 SNPHO15079 494 aa5.1□□□□□ -1.59
ATRX-220ENST00000635865 PLCB2Q00722 1185 aa5.1□□□□□ -1.59
ATRX-220ENST00000635865 BCANQ96GW7 911 aa5.1□□□□□ -1.59
ATRX-220ENST00000635865 IRX5P78411 483 aaPredicted RBP5.09□□□□□ -1.59
ATRX-220ENST00000635865 SPDYE4A6NLX3 237 aa5.08□□□□□ -1.6
ATRX-220ENST00000635865 HS3ST6Q96QI5 342 aa5.07□□□□□ -1.6
ATRX-220ENST00000635865 SGIP1Q9BQI5 828 aa5.07□□□□□ -1.6
ATRX-220ENST00000635865 PRKCSHP14314 528 aaPredicted RBP5.06□□□□□ -1.6
ATRX-220ENST00000635865 PLCG2P16885 1265 aa5.06□□□□□ -1.6
ATRX-220ENST00000635865 EMP3P54852 163 aa5.06□□□□□ -1.6
ATRX-220ENST00000635865 RASEFQ8IZ41 740 aa5.06□□□□□ -1.6
ATRX-220ENST00000635865 HAP1P54257 671 aaPredicted RBP5.05□□□□□ -1.6
ATRX-220ENST00000635865 TAOK2Q9UL54 1235 aa5.04□□□□□ -1.6
ATRX-220ENST00000635865 FAM205CA6NFA0 338 aa5.02□□□□□ -1.61
ATRX-220ENST00000635865 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.02□□□□□ -1.61
ATRX-220ENST00000635865 IFNL1Q8IU54 200 aa5.01□□□□□ -1.61
ATRX-220ENST00000635865 OCEL1Q9H607 264 aa5.01□□□□□ -1.61
ATRX-220ENST00000635865 PCDHB13Q9Y5F0 798 aa5.01□□□□□ -1.61
ATRX-220ENST00000635865 VSIG10Q8N0Z9 540 aa5□□□□□ -1.61
ATRX-220ENST00000635865 RNF166Q96A37 237 aaPredicted RBP5□□□□□ -1.61
ATRX-220ENST00000635865 TMEM106CQ9BVX2 250 aa5□□□□□ -1.61
ATRX-220ENST00000635865 PROM2Q8N271 834 aa4.97□□□□□ -1.61
ATRX-220ENST00000635865 TPRNQ4KMQ1 711 aa4.96□□□□□ -1.62
ATRX-220ENST00000635865 DCAF8L2P0C7V8 631 aa4.95□□□□□ -1.62
ATRX-220ENST00000635865 FBXO3Q9UK99 471 aa4.95□□□□□ -1.62
ATRX-220ENST00000635865 PDCD7Q8N8D1 485 aaKnown RBP4.94□□□□□ -1.62
ATRX-220ENST00000635865 MYT1LQ9UL68 1186 aa4.93□□□□□ -1.62
ATRX-220ENST00000635865 HOXB3P14651 431 aaPredicted RBP4.91□□□□□ -1.62
ATRX-220ENST00000635865 NUBP1P53384 320 aa4.91□□□□□ -1.62
ATRX-220ENST00000635865 DAXXQ9UER7 740 aaPredicted RBP4.91□□□□□ -1.62
ATRX-220ENST00000635865 C3orf67Q6ZVT6 689 aa4.9□□□□□ -1.63
ATRX-220ENST00000635865 HOXB1P14653 301 aaPredicted RBP4.89□□□□□ -1.63
ATRX-220ENST00000635865 MIER1Q8N108 512 aa4.87□□□□□ -1.63
ATRX-220ENST00000635865 L3MBTL3Q96JM7 780 aaPredicted RBP4.87□□□□□ -1.63
ATRX-220ENST00000635865 ARXQ96QS3 562 aa4.87□□□□□ -1.63
ATRX-220ENST00000635865 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.87□□□□□ -1.63
ATRX-220ENST00000635865 ERICH6Q7L0X2 663 aa4.86□□□□□ -1.63
ATRX-220ENST00000635865 PLEKHG5O94827 1062 aa4.85□□□□□ -1.63
ATRX-220ENST00000635865 ERBB3P21860 1342 aa4.85□□□□□ -1.63
ATRX-220ENST00000635865 PTGER2P43116 358 aa4.84□□□□□ -1.63
ATRX-220ENST00000635865 ILDR1Q86SU0 546 aaPredicted RBP4.84□□□□□ -1.63
ATRX-220ENST00000635865 KDM2AQ9Y2K7 1162 aa4.84□□□□□ -1.63
ATRX-220ENST00000635865 VARS2Q5ST30 1063 aaKnown RBP4.83□□□□□ -1.64
ATRX-220ENST00000635865 ZNF687Q8N1G0 1237 aa4.83□□□□□ -1.64
ATRX-220ENST00000635865 BBXQ8WY36 941 aaPredicted RBP4.83□□□□□ -1.64
ATRX-220ENST00000635865 TULP1O00294 542 aaPredicted RBP4.82□□□□□ -1.64
ATRX-220ENST00000635865 VASPP50552 380 aaPredicted RBP4.82□□□□□ -1.64
ATRX-220ENST00000635865 TIMELESSQ9UNS1 1208 aa4.82□□□□□ -1.64
ATRX-220ENST00000635865 FAM212AQ96EL1 285 aa4.81□□□□□ -1.64
ATRX-220ENST00000635865 PCDHB8Q9UN66 801 aa4.81□□□□□ -1.64
ATRX-220ENST00000635865 GTF3C3Q9Y5Q9 886 aa4.81□□□□□ -1.64
ATRX-220ENST00000635865 PAXIP1Q6ZW49 1069 aaPredicted RBP4.8□□□□□ -1.64
ATRX-220ENST00000635865 PLA2G2EQ9NZK7 142 aa4.8□□□□□ -1.64
ATRX-220ENST00000635865 PKD2Q13563 968 aa4.79□□□□□ -1.64
ATRX-220ENST00000635865 ZNF710Q8N1W2 664 aa4.79□□□□□ -1.64
ATRX-220ENST00000635865 CFAP44Q96MT7 982 aa4.79□□□□□ -1.64
ATRX-220ENST00000635865 DOK7Q18PE1 504 aa4.78□□□□□ -1.64
ATRX-220ENST00000635865 DPY19L2Q6NUT2 758 aa4.78□□□□□ -1.64
ATRX-220ENST00000635865 IFNLR1Q8IU57 520 aaPredicted RBP4.78□□□□□ -1.64
ATRX-220ENST00000635865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.78□□□□□ -1.642e-13■■■■□ 21.9
ATRX-220ENST00000635865 PYGBP11216 843 aa4.77□□□□□ -1.65
ATRX-220ENST00000635865 MKRN3Q13064 507 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms