RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 CCDC61Q9Y6R9 512 aa12.29□□□□□ -0.44
CHD2-219ENST00000630016 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
CHD2-219ENST00000630016 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
CHD2-219ENST00000630016 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
CHD2-219ENST00000630016 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
CHD2-219ENST00000630016 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
CHD2-219ENST00000630016 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
CHD2-219ENST00000630016 SLC39A7Q92504 469 aa12.15□□□□□ -0.46
CHD2-219ENST00000630016 MAP3K13O43283 966 aa12.14□□□□□ -0.47
CHD2-219ENST00000630016 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
CHD2-219ENST00000630016 NUBP1P53384 320 aa12.13□□□□□ -0.47
CHD2-219ENST00000630016 FAM212AQ96EL1 285 aa12.13□□□□□ -0.47
CHD2-219ENST00000630016 C7P10643 843 aa12.11□□□□□ -0.47
CHD2-219ENST00000630016 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
CHD2-219ENST00000630016 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
CHD2-219ENST00000630016 TIE1P35590 1138 aa12.08□□□□□ -0.48
CHD2-219ENST00000630016 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
CHD2-219ENST00000630016 BMP2KQ9NSY1 1161 aaPredicted RBP12.07□□□□□ -0.48
CHD2-219ENST00000630016 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
CHD2-219ENST00000630016 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
CHD2-219ENST00000630016 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
CHD2-219ENST00000630016 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
CHD2-219ENST00000630016 TTLL13PA6NNM8 815 aa11.99□□□□□ -0.49
CHD2-219ENST00000630016 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
CHD2-219ENST00000630016 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
CHD2-219ENST00000630016 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
CHD2-219ENST00000630016 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
CHD2-219ENST00000630016 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
CHD2-219ENST00000630016 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
CHD2-219ENST00000630016 SEC24BO95487 1268 aa11.92□□□□□ -0.5
CHD2-219ENST00000630016 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
CHD2-219ENST00000630016 PYGBP11216 843 aa11.91□□□□□ -0.5
CHD2-219ENST00000630016 IER5LQ5T953 404 aa11.9□□□□□ -0.5
CHD2-219ENST00000630016 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
CHD2-219ENST00000630016 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
CHD2-219ENST00000630016 GSE1Q14687 1217 aa11.89□□□□□ -0.51
CHD2-219ENST00000630016 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
CHD2-219ENST00000630016 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
CHD2-219ENST00000630016 PCDHB8Q9UN66 801 aa11.8□□□□□ -0.52
CHD2-219ENST00000630016 PLCG2P16885 1265 aa11.79□□□□□ -0.52
CHD2-219ENST00000630016 ZNF467Q7Z7K2 595 aaPredicted RBP11.79□□□□□ -0.52
CHD2-219ENST00000630016 SPOCK2Q92563 424 aa11.76□□□□□ -0.53
CHD2-219ENST00000630016 POTEMA6NI47 508 aa11.75□□□□□ -0.53
CHD2-219ENST00000630016 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
CHD2-219ENST00000630016 CHRM1P11229 460 aaPredicted RBP11.73□□□□□ -0.53
CHD2-219ENST00000630016 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
CHD2-219ENST00000630016 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
CHD2-219ENST00000630016 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
CHD2-219ENST00000630016 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
CHD2-219ENST00000630016 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
CHD2-219ENST00000630016 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
CHD2-219ENST00000630016 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.54
CHD2-219ENST00000630016 PSEN1P49768 467 aa11.64□□□□□ -0.55
CHD2-219ENST00000630016 MKRN3Q13064 507 aaKnown RBP11.64□□□□□ -0.55
CHD2-219ENST00000630016 PDAP1Q13442 181 aaKnown RBP11.62□□□□□ -0.55
CHD2-219ENST00000630016 LCE2DQ5TA82 110 aaPredicted RBP11.61□□□□□ -0.55
CHD2-219ENST00000630016 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
CHD2-219ENST00000630016 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
CHD2-219ENST00000630016 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
CHD2-219ENST00000630016 PDCD7Q8N8D1 485 aaKnown RBP11.56□□□□□ -0.56
CHD2-219ENST00000630016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.565e-12■■□□□ 14.2
CHD2-219ENST00000630016 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
CHD2-219ENST00000630016 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
CHD2-219ENST00000630016 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
CHD2-219ENST00000630016 SNPHO15079 494 aa11.48□□□□□ -0.57
CHD2-219ENST00000630016 ST18O60284 1047 aa11.47□□□□□ -0.57
CHD2-219ENST00000630016 G3V3G9 751 aa11.44□□□□□ -0.58
CHD2-219ENST00000630016 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
CHD2-219ENST00000630016 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
CHD2-219ENST00000630016 RIOK3O14730 519 aaKnown RBP11.38□□□□□ -0.59
CHD2-219ENST00000630016 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
CHD2-219ENST00000630016 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
CHD2-219ENST00000630016 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
CHD2-219ENST00000630016 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
CHD2-219ENST00000630016 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
CHD2-219ENST00000630016 RNF25Q96BH1 459 aaPredicted RBP11.34□□□□□ -0.59
CHD2-219ENST00000630016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
CHD2-219ENST00000630016 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
CHD2-219ENST00000630016 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
CHD2-219ENST00000630016 SOX12O15370 315 aa11.28□□□□□ -0.6
CHD2-219ENST00000630016 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
CHD2-219ENST00000630016 EMP3P54852 163 aa11.25□□□□□ -0.61
CHD2-219ENST00000630016 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
CHD2-219ENST00000630016 ECM2O94769 699 aaPredicted RBP11.2□□□□□ -0.62
CHD2-219ENST00000630016 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
CHD2-219ENST00000630016 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
CHD2-219ENST00000630016 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
CHD2-219ENST00000630016 BCL11BQ9C0K0 894 aaPredicted RBP11.19□□□□□ -0.62
CHD2-219ENST00000630016 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
CHD2-219ENST00000630016 STK24Q9Y6E0 443 aa11.17□□□□□ -0.62
CHD2-219ENST00000630016 HOXB3P14651 431 aaPredicted RBP11.16□□□□□ -0.62
CHD2-219ENST00000630016 NLRP6P59044 892 aa11.16□□□□□ -0.62
CHD2-219ENST00000630016 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
CHD2-219ENST00000630016 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
CHD2-219ENST00000630016 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
CHD2-219ENST00000630016 STK25O00506 426 aa11.14□□□□□ -0.63
CHD2-219ENST00000630016 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
CHD2-219ENST00000630016 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
CHD2-219ENST00000630016 PKD2Q13563 968 aa11.09□□□□□ -0.63
CHD2-219ENST00000630016 FBXO22Q8NEZ5 403 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms