RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
SYNGAP1-208ENST00000629380 PTMAP06454 111 aaKnown RBP17.34■□□□□ 0.37
SYNGAP1-208ENST00000629380 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
SYNGAP1-208ENST00000629380 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
SYNGAP1-208ENST00000629380 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
SYNGAP1-208ENST00000629380 NRDCO43847 1150 aa17.29■□□□□ 0.36
SYNGAP1-208ENST00000629380 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
SYNGAP1-208ENST00000629380 EEA1Q15075 1411 aa17.27■□□□□ 0.36
SYNGAP1-208ENST00000629380 FAM9BQ8IZU0 186 aa17.26■□□□□ 0.35
SYNGAP1-208ENST00000629380 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
SYNGAP1-208ENST00000629380 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
SYNGAP1-208ENST00000629380 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
SYNGAP1-208ENST00000629380 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
SYNGAP1-208ENST00000629380 A0A0G2JS52 829 aa17.23■□□□□ 0.35
SYNGAP1-208ENST00000629380 PPP1R15AO75807 674 aaPredicted RBP17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 ERICH6BQ5W0A0 696 aa17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 ARID4BQ4LE39 1312 aaPredicted RBP17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 L1TD1Q5T7N2 865 aaKnown RBP17.19■□□□□ 0.34
SYNGAP1-208ENST00000629380 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
SYNGAP1-208ENST00000629380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■■■□ 21.3
SYNGAP1-208ENST00000629380 MRS2Q9HD23 443 aa17.15■□□□□ 0.34
SYNGAP1-208ENST00000629380 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-208ENST00000629380 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-208ENST00000629380 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
SYNGAP1-208ENST00000629380 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
SYNGAP1-208ENST00000629380 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
SYNGAP1-208ENST00000629380 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.331e-7■■■■■ 66.8
SYNGAP1-208ENST00000629380 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
SYNGAP1-208ENST00000629380 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
SYNGAP1-208ENST00000629380 CLIP1P30622 1438 aa17.07■□□□□ 0.32
SYNGAP1-208ENST00000629380 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
SYNGAP1-208ENST00000629380 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
SYNGAP1-208ENST00000629380 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
SYNGAP1-208ENST00000629380 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
SYNGAP1-208ENST00000629380 KIAA2012Q0VF49 1180 aa17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 TULP1O00294 542 aaPredicted RBP17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 NPHP1O15259 732 aa17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-208ENST00000629380 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-208ENST00000629380 FGD1P98174 961 aa17.02■□□□□ 0.31
SYNGAP1-208ENST00000629380 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
SYNGAP1-208ENST00000629380 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
SYNGAP1-208ENST00000629380 MS4A1P11836 297 aa16.99■□□□□ 0.31
SYNGAP1-208ENST00000629380 CLSTN1O94985 981 aa16.98■□□□□ 0.31
SYNGAP1-208ENST00000629380 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
SYNGAP1-208ENST00000629380 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
SYNGAP1-208ENST00000629380 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
SYNGAP1-208ENST00000629380 CFDP1Q9UEE9 299 aaPredicted RBP16.96■□□□□ 0.31
SYNGAP1-208ENST00000629380 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
SYNGAP1-208ENST00000629380 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
SYNGAP1-208ENST00000629380 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
SYNGAP1-208ENST00000629380 KANK1Q14678 1352 aa16.95■□□□□ 0.3
SYNGAP1-208ENST00000629380 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
SYNGAP1-208ENST00000629380 NOC3LQ8WTT2 800 aaKnown RBP16.94■□□□□ 0.3
SYNGAP1-208ENST00000629380 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
SYNGAP1-208ENST00000629380 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.31e-7■■■■■ 32.2
SYNGAP1-208ENST00000629380 KCNJ4P48050 445 aa16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 OS9Q13438 667 aaPredicted RBP16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 PNNQ9H307 717 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-208ENST00000629380 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
SYNGAP1-208ENST00000629380 MCCP23508 829 aa16.92■□□□□ 0.3
SYNGAP1-208ENST00000629380 PTMSP20962 102 aa16.92■□□□□ 0.3
SYNGAP1-208ENST00000629380 MSNP26038 577 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-208ENST00000629380 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
SYNGAP1-208ENST00000629380 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
SYNGAP1-208ENST00000629380 HSCBQ8IWL3 235 aa16.88■□□□□ 0.29
SYNGAP1-208ENST00000629380 GNL2Q13823 731 aaKnown RBP16.87■□□□□ 0.29
SYNGAP1-208ENST00000629380 DRC7Q8IY82 874 aa16.87■□□□□ 0.29
SYNGAP1-208ENST00000629380 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
SYNGAP1-208ENST00000629380 NUDCQ9Y266 331 aa16.84■□□□□ 0.29
SYNGAP1-208ENST00000629380 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
SYNGAP1-208ENST00000629380 PLCB2Q00722 1185 aa16.84■□□□□ 0.29
SYNGAP1-208ENST00000629380 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-208ENST00000629380 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
SYNGAP1-208ENST00000629380 CUX2O14529 1486 aa16.81■□□□□ 0.28
SYNGAP1-208ENST00000629380 IRX6P78412 446 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-208ENST00000629380 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-208ENST00000629380 GOLGA6L1Q8N7Z2 621 aa16.78■□□□□ 0.28
SYNGAP1-208ENST00000629380 CCDC34Q96HJ3 373 aa16.78■□□□□ 0.28
SYNGAP1-208ENST00000629380 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
SYNGAP1-208ENST00000629380 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
SYNGAP1-208ENST00000629380 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
SYNGAP1-208ENST00000629380 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
SYNGAP1-208ENST00000629380 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
SYNGAP1-208ENST00000629380 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
SYNGAP1-208ENST00000629380 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
SYNGAP1-208ENST00000629380 POGKQ9P215 609 aa16.73■□□□□ 0.27
SYNGAP1-208ENST00000629380 LAS1LQ9Y4W2 734 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-208ENST00000629380 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
SYNGAP1-208ENST00000629380 TPM4P67936 248 aa16.72■□□□□ 0.27
SYNGAP1-208ENST00000629380 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
SYNGAP1-208ENST00000629380 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
SYNGAP1-208ENST00000629380 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms