RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 PRG4Q92954 1404 aaPredicted RBP29.11■■■□□ 2.25
PDCD6-214ENST00000628729 IGF1RP08069 1367 aa29.09■■■□□ 2.25
PDCD6-214ENST00000628729 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
PDCD6-214ENST00000628729 JPH4Q96JJ6 628 aa29.03■■■□□ 2.24
PDCD6-214ENST00000628729 KIAA0586Q9BVV6 1533 aa28.97■■■□□ 2.23
PDCD6-214ENST00000628729 KIF13AQ9H1H9 1805 aa28.91■■■□□ 2.22
PDCD6-214ENST00000628729 ADCY10Q96PN6 1610 aa28.89■■■□□ 2.22
PDCD6-214ENST00000628729 CARMIL1Q5VZK9 1371 aa28.87■■■□□ 2.21
PDCD6-214ENST00000628729 MAPKBP1O60336 1514 aa28.77■■■□□ 2.2
PDCD6-214ENST00000628729 IQGAP2Q13576 1575 aa28.76■■■□□ 2.19
PDCD6-214ENST00000628729 DIP2BQ9P265 1576 aa28.71■■■□□ 2.19
PDCD6-214ENST00000628729 ABCC10Q5T3U5 1492 aa28.7■■■□□ 2.18
PDCD6-214ENST00000628729 RAPGEF2Q9Y4G8 1499 aa28.66■■■□□ 2.18
PDCD6-214ENST00000628729 DISP1Q96F81 1524 aa28.64■■■□□ 2.18
PDCD6-214ENST00000628729 PTPRGP23470 1445 aa28.62■■■□□ 2.17
PDCD6-214ENST00000628729 TNIKQ9UKE5 1360 aa28.61■■■□□ 2.17
PDCD6-214ENST00000628729 CARMIL2Q6F5E8 1435 aa28.6■■■□□ 2.17
PDCD6-214ENST00000628729 UGGT2Q9NYU1 1516 aa28.59■■■□□ 2.17
PDCD6-214ENST00000628729 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
PDCD6-214ENST00000628729 FAM69CQ0P6D2 419 aa28.56■■■□□ 2.16
PDCD6-214ENST00000628729 ABCC2Q92887 1545 aa28.54■■■□□ 2.16
PDCD6-214ENST00000628729 CTTNBP2Q8WZ74 1663 aa28.54■■■□□ 2.16
PDCD6-214ENST00000628729 KIAA0556O60303 1618 aa28.54■■■□□ 2.16
PDCD6-214ENST00000628729 TTBK1Q5TCY1 1321 aaPredicted RBP28.53■■■□□ 2.16
PDCD6-214ENST00000628729 UHRF1BP1LA0JNW5 1464 aa28.49■■■□□ 2.15
PDCD6-214ENST00000628729 TSPOAP1O95153 1857 aa28.46■■■□□ 2.15
PDCD6-214ENST00000628729 PRXQ9BXM0 1461 aa28.45■■■□□ 2.14
PDCD6-214ENST00000628729 UACAQ9BZF9 1416 aa28.44■■■□□ 2.14
PDCD6-214ENST00000628729 ASXL2Q76L83 1435 aa28.42■■■□□ 2.14
PDCD6-214ENST00000628729 PPRC1Q5VV67 1664 aaKnown RBP28.39■■■□□ 2.14
PDCD6-214ENST00000628729 ZCCHC11Q5TAX3 1644 aaKnown RBP28.39■■■□□ 2.13
PDCD6-214ENST00000628729 KDM5BQ9UGL1 1544 aa28.38■■■□□ 2.13
PDCD6-214ENST00000628729 KDM6BO15054 1643 aa28.38■■■□□ 2.13
PDCD6-214ENST00000628729 PLB1Q6P1J6 1458 aa28.36■■■□□ 2.13
PDCD6-214ENST00000628729 GLI2P10070 1586 aa28.36■■■□□ 2.13
PDCD6-214ENST00000628729 EPRSP07814 1512 aaKnown RBP28.28■■■□□ 2.12
PDCD6-214ENST00000628729 ABCA8O94911 1581 aa28.27■■■□□ 2.12
PDCD6-214ENST00000628729 MAP3K4Q9Y6R4 1608 aa28.26■■■□□ 2.11
PDCD6-214ENST00000628729 GOLGA3Q08378 1498 aa28.26■■■□□ 2.11
PDCD6-214ENST00000628729 WDR7Q9Y4E6 1490 aa28.17■■■□□ 2.1
PDCD6-214ENST00000628729 SAMD9Q5K651 1589 aa28.14■■■□□ 2.1
PDCD6-214ENST00000628729 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
PDCD6-214ENST00000628729 CSRNP3Q8WYN3 585 aa28.1■■■□□ 2.09
PDCD6-214ENST00000628729 EEA1Q15075 1411 aa28.05■■■□□ 2.08
PDCD6-214ENST00000628729 TEX14Q8IWB6 1497 aa28.04■■■□□ 2.08
PDCD6-214ENST00000628729 CFAP43Q8NDM7 1665 aa28.03■■■□□ 2.08
PDCD6-214ENST00000628729 P3H3Q8IVL6 736 aa28.01■■■□□ 2.07
PDCD6-214ENST00000628729 KDM4FA0A1W2PPD8 638 aa28■■■□□ 2.07
PDCD6-214ENST00000628729 RAPGEF6Q8TEU7 1601 aa27.96■■■□□ 2.07
PDCD6-214ENST00000628729 ATP10BO94823 1461 aa27.96■■■□□ 2.07
PDCD6-214ENST00000628729 KIF21BO75037 1637 aa27.96■■■□□ 2.07
PDCD6-214ENST00000628729 MAGI3Q5TCQ9 1506 aa27.95■■■□□ 2.06
PDCD6-214ENST00000628729 CD109Q6YHK3 1445 aa27.92■■■□□ 2.06
PDCD6-214ENST00000628729 ARID3CA6NKF2 412 aa27.92■■■□□ 2.06
PDCD6-214ENST00000628729 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
PDCD6-214ENST00000628729 KCNH8Q96L42 1107 aa27.89■■■□□ 2.06
PDCD6-214ENST00000628729 FHOD3Q2V2M9 1422 aa27.88■■■□□ 2.05
PDCD6-214ENST00000628729 NUP153P49790 1475 aaKnown RBP27.87■■■□□ 2.05
PDCD6-214ENST00000628729 ABCA9Q8IUA7 1624 aa27.86■■■□□ 2.05
PDCD6-214ENST00000628729 ADGRL1O94910 1474 aa27.86■■■□□ 2.05
PDCD6-214ENST00000628729 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
PDCD6-214ENST00000628729 EFCAB5A4FU69 1503 aa27.8■■■□□ 2.04
PDCD6-214ENST00000628729 ARAP3Q8WWN8 1544 aa27.73■■■□□ 2.03
PDCD6-214ENST00000628729 FRMPD1Q5SYB0 1578 aa27.66■■■□□ 2.02
PDCD6-214ENST00000628729 CDK13Q14004 1512 aaKnown RBP27.63■■■□□ 2.01
PDCD6-214ENST00000628729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.62■■■□□ 2.01
PDCD6-214ENST00000628729 HNRNPUL2Q1KMD3 747 aaKnown RBP27.62■■■□□ 2.01
PDCD6-214ENST00000628729 EHMT2Q96KQ7 1210 aa27.62■■■□□ 2.01
PDCD6-214ENST00000628729 NEO1Q92859 1461 aa27.62■■■□□ 2.01
PDCD6-214ENST00000628729 TTC37Q6PGP7 1564 aa27.6■■■□□ 2.01
PDCD6-214ENST00000628729 ARHGAP35Q9NRY4 1499 aa27.6■■■□□ 2.01
PDCD6-214ENST00000628729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.6■■■□□ 2.012e-6■■■■■ 26.8
PDCD6-214ENST00000628729 PHLDB1Q86UU1 1377 aa27.56■■■□□ 2
PDCD6-214ENST00000628729 HECW1Q76N89 1606 aa27.52■■■□□ 2
PDCD6-214ENST00000628729 RAPGEF3O95398 923 aa27.52■■■□□ 2
PDCD6-214ENST00000628729 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
PDCD6-214ENST00000628729 RICTORQ6R327 1708 aa27.52■■■□□ 2
PDCD6-214ENST00000628729 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
PDCD6-214ENST00000628729 CFAP74Q9C0B2 1584 aa27.48■■□□□ 1.99
PDCD6-214ENST00000628729 PLEKHD1A6NEE1 506 aa27.48■■□□□ 1.99
PDCD6-214ENST00000628729 HECW2Q9P2P5 1572 aa27.48■■□□□ 1.99
PDCD6-214ENST00000628729 FANCAO15360 1455 aa27.47■■□□□ 1.99
PDCD6-214ENST00000628729 FMN1Q68DA7 1419 aa27.47■■□□□ 1.99
PDCD6-214ENST00000628729 ARHGEF40Q8TER5 1519 aa27.46■■□□□ 1.99
PDCD6-214ENST00000628729 ADAMTSL3P82987 1691 aa27.44■■□□□ 1.98
PDCD6-214ENST00000628729 AKNAQ7Z591 1439 aa27.43■■□□□ 1.98
PDCD6-214ENST00000628729 KIF14Q15058 1648 aa27.41■■□□□ 1.98
PDCD6-214ENST00000628729 DENND4BO75064 1496 aaPredicted RBP27.4■■□□□ 1.98
PDCD6-214ENST00000628729 ZMYM4Q5VZL5 1548 aa27.39■■□□□ 1.98
PDCD6-214ENST00000628729 BCORL1Q5H9F3 1711 aa27.38■■□□□ 1.97
PDCD6-214ENST00000628729 PCF11O94913 1555 aaKnown RBP27.37■■□□□ 1.97
PDCD6-214ENST00000628729 SIGLEC1Q9BZZ2 1709 aa27.37■■□□□ 1.97
PDCD6-214ENST00000628729 MYO5CQ9NQX4 1742 aa27.36■■□□□ 1.97
PDCD6-214ENST00000628729 MADDQ8WXG6 1647 aa27.34■■□□□ 1.97
PDCD6-214ENST00000628729 PLCH2O75038 1416 aa27.33■■□□□ 1.97
PDCD6-214ENST00000628729 ATP1B4Q9UN42 357 aaPredicted RBP27.31■■□□□ 1.96
PDCD6-214ENST00000628729 YEATS2Q9ULM3 1422 aa27.3■■□□□ 1.96
PDCD6-214ENST00000628729 PTPRMP28827 1452 aa27.3■■□□□ 1.96
PDCD6-214ENST00000628729 TROQ12816 1431 aaPredicted RBP27.29■■□□□ 1.96
PDCD6-214ENST00000628729 ZFYVE16Q7Z3T8 1539 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms