RNA–Protein interactions for RNA: ENST00000628477.2

DDX46-212, Transcript of DEAD-box helicase 46, humanhuman

TSL 5 BASIC

Gene DDX46, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-212ENST00000628477 VPS8Q8N3P4 1428 aa21.78■■□□□ 1.08
DDX46-212ENST00000628477 SYNJ2O15056 1496 aa21.78■■□□□ 1.08
DDX46-212ENST00000628477 GRIN2AQ12879 1464 aa21.76■■□□□ 1.07
DDX46-212ENST00000628477 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
DDX46-212ENST00000628477 FBLN2P98095 1184 aa21.69■■□□□ 1.06
DDX46-212ENST00000628477 EFCAB5A4FU69 1503 aa21.69■■□□□ 1.06
DDX46-212ENST00000628477 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
DDX46-212ENST00000628477 PPARGC1BQ86YN6 1023 aaKnown RBP21.66■■□□□ 1.06
DDX46-212ENST00000628477 KIAA0586Q9BVV6 1533 aa21.66■■□□□ 1.06
DDX46-212ENST00000628477 P3H3Q8IVL6 736 aa21.65■■□□□ 1.06
DDX46-212ENST00000628477 CEP170Q5SW79 1584 aa21.63■■□□□ 1.05
DDX46-212ENST00000628477 NUP160Q12769 1436 aa21.63■■□□□ 1.05
DDX46-212ENST00000628477 SAMD9Q5K651 1589 aa21.63■■□□□ 1.05
DDX46-212ENST00000628477 FHOD3Q2V2M9 1422 aa21.62■■□□□ 1.05
DDX46-212ENST00000628477 UGGT2Q9NYU1 1516 aa21.58■■□□□ 1.05
DDX46-212ENST00000628477 TRIM26Q12899 539 aaPredicted RBP21.57■■□□□ 1.04
DDX46-212ENST00000628477 APLP2Q06481 763 aa21.55■■□□□ 1.04
DDX46-212ENST00000628477 CHD1O14646 1710 aa21.55■■□□□ 1.04
DDX46-212ENST00000628477 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
DDX46-212ENST00000628477 FMN1Q68DA7 1419 aa21.5■■□□□ 1.03
DDX46-212ENST00000628477 DISP1Q96F81 1524 aa21.49■■□□□ 1.03
DDX46-212ENST00000628477 JPH4Q96JJ6 628 aa21.48■■□□□ 1.03
DDX46-212ENST00000628477 TTBK1Q5TCY1 1321 aaPredicted RBP21.48■■□□□ 1.03
DDX46-212ENST00000628477 PCF11O94913 1555 aaKnown RBP21.47■■□□□ 1.03
DDX46-212ENST00000628477 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
DDX46-212ENST00000628477 KIAA0556O60303 1618 aa21.45■■□□□ 1.02
DDX46-212ENST00000628477 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
DDX46-212ENST00000628477 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
DDX46-212ENST00000628477 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
DDX46-212ENST00000628477 ATP1B4Q9UN42 357 aaPredicted RBP21.4■■□□□ 1.02
DDX46-212ENST00000628477 TIAM1Q13009 1591 aa21.38■■□□□ 1.01
DDX46-212ENST00000628477 CARMIL2Q6F5E8 1435 aa21.37■■□□□ 1.01
DDX46-212ENST00000628477 PRG4Q92954 1404 aaPredicted RBP21.32■■□□□ 1
DDX46-212ENST00000628477 SHROOM2Q13796 1616 aa21.32■■□□□ 1
DDX46-212ENST00000628477 CFAP43Q8NDM7 1665 aa21.32■■□□□ 1
DDX46-212ENST00000628477 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
DDX46-212ENST00000628477 LRRC9Q6ZRR7 1453 aa21.3■■□□□ 1
DDX46-212ENST00000628477 LRRIQ1Q96JM4 1722 aa21.29■■□□□ 1
DDX46-212ENST00000628477 HECW1Q76N89 1606 aa21.27■■□□□ 1
DDX46-212ENST00000628477 RAPGEF6Q8TEU7 1601 aa21.23■□□□□ 0.99
DDX46-212ENST00000628477 EPRSP07814 1512 aaKnown RBP21.22■□□□□ 0.99
DDX46-212ENST00000628477 CCDC18Q5T9S5 1454 aa21.22■□□□□ 0.99
DDX46-212ENST00000628477 PLB1Q6P1J6 1458 aa21.21■□□□□ 0.99
DDX46-212ENST00000628477 ERCC6L2Q5T890 1561 aa21.2■□□□□ 0.98
DDX46-212ENST00000628477 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
DDX46-212ENST00000628477 PTPRGP23470 1445 aa21.19■□□□□ 0.98
DDX46-212ENST00000628477 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
DDX46-212ENST00000628477 CDK13Q14004 1512 aaKnown RBP21.17■□□□□ 0.98
DDX46-212ENST00000628477 ABCA8O94911 1581 aa21.17■□□□□ 0.98
DDX46-212ENST00000628477 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
DDX46-212ENST00000628477 MTUS2Q5JR59 1369 aa21.16■□□□□ 0.98
DDX46-212ENST00000628477 MAGI3Q5TCQ9 1506 aa21.14■□□□□ 0.97
DDX46-212ENST00000628477 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
DDX46-212ENST00000628477 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
DDX46-212ENST00000628477 EHBP1L1Q8N3D4 1523 aa21.11■□□□□ 0.97
DDX46-212ENST00000628477 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
DDX46-212ENST00000628477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
DDX46-212ENST00000628477 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
DDX46-212ENST00000628477 CCNB3Q8WWL7 1395 aa21.06■□□□□ 0.96
DDX46-212ENST00000628477 SUPT6HQ7KZ85 1726 aaKnown RBP21.05■□□□□ 0.96
DDX46-212ENST00000628477 NCOA2Q15596 1464 aa21.05■□□□□ 0.96
DDX46-212ENST00000628477 ATP10BO94823 1461 aa21.04■□□□□ 0.96
DDX46-212ENST00000628477 CDK11AQ9UQ88 783 aaPredicted RBP21.04■□□□□ 0.96
DDX46-212ENST00000628477 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
DDX46-212ENST00000628477 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
DDX46-212ENST00000628477 TROQ12816 1431 aaPredicted RBP20.98■□□□□ 0.95
DDX46-212ENST00000628477 MYOM3Q5VTT5 1437 aa20.96■□□□□ 0.95
DDX46-212ENST00000628477 FGD6Q6ZV73 1430 aa20.96■□□□□ 0.95
DDX46-212ENST00000628477 UHRF1BP1LA0JNW5 1464 aa20.95■□□□□ 0.94
DDX46-212ENST00000628477 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
DDX46-212ENST00000628477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.94
DDX46-212ENST00000628477 FAM50AQ14320 339 aaKnown RBP20.92■□□□□ 0.94
DDX46-212ENST00000628477 ADCY10Q96PN6 1610 aa20.9■□□□□ 0.94
DDX46-212ENST00000628477 KIF14Q15058 1648 aa20.87■□□□□ 0.93
DDX46-212ENST00000628477 ITGAEP38570 1179 aa20.87■□□□□ 0.93
DDX46-212ENST00000628477 KDM5BQ9UGL1 1544 aa20.87■□□□□ 0.93
DDX46-212ENST00000628477 MIA2Q96PC5 1412 aa20.85■□□□□ 0.93
DDX46-212ENST00000628477 PTPN23Q9H3S7 1636 aa20.85■□□□□ 0.93
DDX46-212ENST00000628477 HRCP23327 699 aa20.85■□□□□ 0.93
DDX46-212ENST00000628477 ZCCHC11Q5TAX3 1644 aaKnown RBP20.84■□□□□ 0.93
DDX46-212ENST00000628477 TCOF1Q13428 1488 aaKnown RBP20.83■□□□□ 0.93
DDX46-212ENST00000628477 ABCC10Q5T3U5 1492 aa20.82■□□□□ 0.92
DDX46-212ENST00000628477 GPATCH8Q9UKJ3 1502 aaKnown RBP20.81■□□□□ 0.92
DDX46-212ENST00000628477 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
DDX46-212ENST00000628477 CFDP1Q9UEE9 299 aaPredicted RBP20.75■□□□□ 0.91
DDX46-212ENST00000628477 PTPRKQ15262 1439 aa20.74■□□□□ 0.91
DDX46-212ENST00000628477 ZNF644Q9H582 1327 aaPredicted RBP20.73■□□□□ 0.91
DDX46-212ENST00000628477 CDC42BPAQ5VT25 1732 aa20.73■□□□□ 0.91
DDX46-212ENST00000628477 CCER1Q8TC90 406 aaPredicted RBP20.72■□□□□ 0.91
DDX46-212ENST00000628477 KCNH8Q96L42 1107 aa20.72■□□□□ 0.91
DDX46-212ENST00000628477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.7■□□□□ 0.9
DDX46-212ENST00000628477 RIMBP3CA6NJZ7 1639 aa20.69■□□□□ 0.9
DDX46-212ENST00000628477 RIMBP3BA6NNM3 1639 aa20.69■□□□□ 0.9
DDX46-212ENST00000628477 RIMBP3Q9UFD9 1639 aa20.69■□□□□ 0.9
DDX46-212ENST00000628477 SETD5Q9C0A6 1442 aa20.68■□□□□ 0.9
DDX46-212ENST00000628477 CAMSAP2Q08AD1 1489 aa20.68■□□□□ 0.9
DDX46-212ENST00000628477 TTC37Q6PGP7 1564 aa20.68■□□□□ 0.9
DDX46-212ENST00000628477 WDR7Q9Y4E6 1490 aa20.67■□□□□ 0.9
DDX46-212ENST00000628477 NPM1P06748 294 aaKnown RBP eCLIP20.67■□□□□ 0.9
DDX46-212ENST00000628477 ZNF777Q9ULD5 760 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms