RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 LRRC9Q6ZRR7 1453 aa39.75■■■■□ 3.95
NRXN1-228ENST00000628364 EFCAB5A4FU69 1503 aa39.75■■■■□ 3.95
NRXN1-228ENST00000628364 URB2Q14146 1524 aaKnown RBP39.69■■■■□ 3.94
NRXN1-228ENST00000628364 CFAP43Q8NDM7 1665 aa39.67■■■■□ 3.94
NRXN1-228ENST00000628364 WDR97A6NE52 1622 aa39.67■■■■□ 3.94
NRXN1-228ENST00000628364 PDS5BQ9NTI5 1447 aa39.64■■■■□ 3.94
NRXN1-228ENST00000628364 PCF11O94913 1555 aaKnown RBP39.63■■■■□ 3.94
NRXN1-228ENST00000628364 CTTNBP2Q8WZ74 1663 aa39.63■■■■□ 3.93
NRXN1-228ENST00000628364 NEUROD1Q13562 356 aa39.61■■■■□ 3.93
NRXN1-228ENST00000628364 AQRO60306 1485 aaKnown RBP eCLIP39.61■■■■□ 3.93
NRXN1-228ENST00000628364 FYCO1Q9BQS8 1478 aa39.59■■■■□ 3.93
NRXN1-228ENST00000628364 CASKIN1Q8WXD9 1431 aa39.55■■■■□ 3.92
NRXN1-228ENST00000628364 FHOD3Q2V2M9 1422 aa39.53■■■■□ 3.92
NRXN1-228ENST00000628364 P3H3Q8IVL6 736 aa39.53■■■■□ 3.92
NRXN1-228ENST00000628364 ABCA5Q8WWZ7 1642 aa39.53■■■■□ 3.92
NRXN1-228ENST00000628364 PHLDB1Q86UU1 1377 aa39.51■■■■□ 3.91
NRXN1-228ENST00000628364 ITGAEP38570 1179 aa39.49■■■■□ 3.91
NRXN1-228ENST00000628364 FMN1Q68DA7 1419 aa39.46■■■■□ 3.91
NRXN1-228ENST00000628364 RAB3GAP2Q9H2M9 1393 aa39.45■■■■□ 3.91
NRXN1-228ENST00000628364 GAPVD1Q14C86 1478 aa39.45■■■■□ 3.91
NRXN1-228ENST00000628364 SETD5Q9C0A6 1442 aa39.41■■■■□ 3.9
NRXN1-228ENST00000628364 TDRD9Q8NDG6 1382 aaKnown RBP39.4■■■■□ 3.9
NRXN1-228ENST00000628364 MIER1Q8N108 512 aa39.4■■■■□ 3.9
NRXN1-228ENST00000628364 ATP1B4Q9UN42 357 aaPredicted RBP39.39■■■■□ 3.9
NRXN1-228ENST00000628364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.36■■■■□ 3.89
NRXN1-228ENST00000628364 KIF21AQ7Z4S6 1674 aa39.33■■■■□ 3.89
NRXN1-228ENST00000628364 SAMD9Q5K651 1589 aa39.32■■■■□ 3.88
NRXN1-228ENST00000628364 FAM50AQ14320 339 aaKnown RBP39.3■■■■□ 3.88
NRXN1-228ENST00000628364 SNAPC4Q5SXM2 1469 aa39.29■■■■□ 3.88
NRXN1-228ENST00000628364 TARBP1Q13395 1621 aaKnown RBP39.24■■■■□ 3.87
NRXN1-228ENST00000628364 MAPKBP1O60336 1514 aa39.24■■■■□ 3.87
NRXN1-228ENST00000628364 DNAJC5BQ9UF47 199 aa39.21■■■■□ 3.87
NRXN1-228ENST00000628364 GTF3C3Q9Y5Q9 886 aa39.2■■■■□ 3.87
NRXN1-228ENST00000628364 THOC2Q8NI27 1593 aaKnown RBP39.16■■■■□ 3.86
NRXN1-228ENST00000628364 MTUS2Q5JR59 1369 aa39.11■■■■□ 3.85
NRXN1-228ENST00000628364 GRIN2BQ13224 1484 aa39.1■■■■□ 3.85
NRXN1-228ENST00000628364 FGD6Q6ZV73 1430 aa39.1■■■■□ 3.85
NRXN1-228ENST00000628364 YTHDC1Q96MU7 727 aaKnown RBP39.08■■■■□ 3.85
NRXN1-228ENST00000628364 PELP1Q8IZL8 1130 aaKnown RBP39.07■■■■□ 3.85
NRXN1-228ENST00000628364 PBRM1Q86U86 1689 aa39.02■■■■□ 3.84
NRXN1-228ENST00000628364 TIMELESSQ9UNS1 1208 aa39.02■■■■□ 3.84
NRXN1-228ENST00000628364 MRC2Q9UBG0 1479 aa39■■■■□ 3.83
NRXN1-228ENST00000628364 LRRIQ1Q96JM4 1722 aa38.98■■■■□ 3.83
NRXN1-228ENST00000628364 EHBP1L1Q8N3D4 1523 aa38.96■■■■□ 3.83
NRXN1-228ENST00000628364 SUPT6HQ7KZ85 1726 aaKnown RBP38.93■■■■□ 3.82
NRXN1-228ENST00000628364 NCOA2Q15596 1464 aa38.93■■■■□ 3.82
NRXN1-228ENST00000628364 CCDC18Q5T9S5 1454 aa38.92■■■■□ 3.82
NRXN1-228ENST00000628364 MYOM3Q5VTT5 1437 aa38.91■■■■□ 3.82
NRXN1-228ENST00000628364 ADAMTS12P58397 1594 aa38.91■■■■□ 3.82
NRXN1-228ENST00000628364 IQGAP2Q13576 1575 aa38.88■■■■□ 3.81
NRXN1-228ENST00000628364 HFM1A2PYH4 1435 aa38.84■■■■□ 3.81
NRXN1-228ENST00000628364 HECW1Q76N89 1606 aa38.81■■■■□ 3.8
NRXN1-228ENST00000628364 SIN3AQ96ST3 1273 aa38.81■■■■□ 3.8
NRXN1-228ENST00000628364 ARHGEF11O15085 1522 aa38.8■■■■□ 3.8
NRXN1-228ENST00000628364 UGGT2Q9NYU1 1516 aa38.8■■■■□ 3.8
NRXN1-228ENST00000628364 IFT140Q96RY7 1462 aa38.79■■■■□ 3.8
NRXN1-228ENST00000628364 PTPRKQ15262 1439 aa38.74■■■■□ 3.79
NRXN1-228ENST00000628364 PTPN23Q9H3S7 1636 aa38.74■■■■□ 3.79
NRXN1-228ENST00000628364 UACAQ9BZF9 1416 aa38.73■■■■□ 3.79
NRXN1-228ENST00000628364 WDR62O43379 1518 aa38.7■■■■□ 3.79
NRXN1-228ENST00000628364 MAGI3Q5TCQ9 1506 aa38.69■■■■□ 3.78
NRXN1-228ENST00000628364 EPRSP07814 1512 aaKnown RBP38.67■■■■□ 3.78
NRXN1-228ENST00000628364 NAIPQ13075 1403 aa38.66■■■■□ 3.78
NRXN1-228ENST00000628364 TCOF1Q13428 1488 aaKnown RBP38.66■■■■□ 3.78
NRXN1-228ENST00000628364 PPP1R15AO75807 674 aaPredicted RBP38.64■■■■□ 3.78
NRXN1-228ENST00000628364 ZNF608Q9ULD9 1512 aaPredicted RBP38.58■■■■□ 3.77
NRXN1-228ENST00000628364 KIAA0586Q9BVV6 1533 aa38.57■■■■□ 3.76
NRXN1-228ENST00000628364 MIA2Q96PC5 1412 aa38.56■■■■□ 3.76
NRXN1-228ENST00000628364 TONSLQ96HA7 1378 aa38.52■■■■□ 3.76
NRXN1-228ENST00000628364 AKNAQ7Z591 1439 aa38.51■■■■□ 3.76
NRXN1-228ENST00000628364 CDK13Q14004 1512 aaKnown RBP38.47■■■■□ 3.75
NRXN1-228ENST00000628364 KIAA0556O60303 1618 aa38.45■■■■□ 3.75
NRXN1-228ENST00000628364 GCC2Q8IWJ2 1684 aa38.45■■■■□ 3.75
NRXN1-228ENST00000628364 GRIN2AQ12879 1464 aa38.42■■■■□ 3.74
NRXN1-228ENST00000628364 DISP1Q96F81 1524 aa38.42■■■■□ 3.74
NRXN1-228ENST00000628364 EIF4G3O43432 1585 aaKnown RBP38.4■■■■□ 3.74
NRXN1-228ENST00000628364 DDX10Q13206 875 aaKnown RBP38.34■■■■□ 3.73
NRXN1-228ENST00000628364 RRP7BPQ9NSQ0 103 aa38.33■■■■□ 3.73
NRXN1-228ENST00000628364 MAGI1Q96QZ7 1491 aaPredicted RBP38.33■■■■□ 3.73
NRXN1-228ENST00000628364 ERCC6Q03468 1493 aa38.3■■■■□ 3.72
NRXN1-228ENST00000628364 RAPGEF6Q8TEU7 1601 aa38.3■■■■□ 3.72
NRXN1-228ENST00000628364 CHIC2Q9UKJ5 165 aa38.29■■■■□ 3.72
NRXN1-228ENST00000628364 NUP153P49790 1475 aaKnown RBP38.28■■■■□ 3.72
NRXN1-228ENST00000628364 CDK11AQ9UQ88 783 aaPredicted RBP38.28■■■■□ 3.72
NRXN1-228ENST00000628364 ROCK1Q13464 1354 aa38.22■■■■□ 3.71
NRXN1-228ENST00000628364 SYNJ2O15056 1496 aa38.2■■■■□ 3.71
NRXN1-228ENST00000628364 ARID3CA6NKF2 412 aa38.2■■■■□ 3.71
NRXN1-228ENST00000628364 TRIM52Q96A61 297 aa38.18■■■■□ 3.7
NRXN1-228ENST00000628364 KDM5BQ9UGL1 1544 aa38.17■■■■□ 3.7
NRXN1-228ENST00000628364 DAPK1P53355 1430 aa38.17■■■■□ 3.7
NRXN1-228ENST00000628364 CHMP7Q8WUX9 453 aaPredicted RBP38.16■■■■□ 3.7
NRXN1-228ENST00000628364 DENND4BO75064 1496 aaPredicted RBP38.14■■■■□ 3.7
NRXN1-228ENST00000628364 DNMT1P26358 1616 aaKnown RBP38.14■■■■□ 3.7
NRXN1-228ENST00000628364 KDM6BO15054 1643 aa38.14■■■■□ 3.7
NRXN1-228ENST00000628364 HIRIP3Q9BW71 556 aaPredicted RBP38.12■■■■□ 3.69
NRXN1-228ENST00000628364 CEP170Q5SW79 1584 aa38.11■■■■□ 3.69
NRXN1-228ENST00000628364 CCER2I3L3R5 266 aa38.11■■■■□ 3.69
NRXN1-228ENST00000628364 MPHOSPH9Q99550 1183 aa38.11■■■■□ 3.69
NRXN1-228ENST00000628364 KCNH8Q96L42 1107 aa38.09■■■■□ 3.69
NRXN1-228ENST00000628364 ABCC5O15440 1437 aa38.09■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms