RNA–Protein interactions for RNA: ENST00000626215.1

LSINCT5-201, long stress-induced non-coding transcript 5, humanhuman

BASIC

Gene LSINCT5, Length 2,647 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSINCT5-201ENST00000626215 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
LSINCT5-201ENST00000626215 APLP2Q06481 763 aa19.75■□□□□ 0.75
LSINCT5-201ENST00000626215 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
LSINCT5-201ENST00000626215 NUP160Q12769 1436 aa19.74■□□□□ 0.75
LSINCT5-201ENST00000626215 FBLN2P98095 1184 aa19.73■□□□□ 0.75
LSINCT5-201ENST00000626215 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
LSINCT5-201ENST00000626215 DNAJC5Q9H3Z4 198 aa19.71■□□□□ 0.75
LSINCT5-201ENST00000626215 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
LSINCT5-201ENST00000626215 RAPGEF2Q9Y4G8 1499 aa19.69■□□□□ 0.74
LSINCT5-201ENST00000626215 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
LSINCT5-201ENST00000626215 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
LSINCT5-201ENST00000626215 RTN4Q9NQC3 1192 aaKnown RBP19.62■□□□□ 0.73
LSINCT5-201ENST00000626215 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
LSINCT5-201ENST00000626215 KIF21BO75037 1637 aa19.62■□□□□ 0.73
LSINCT5-201ENST00000626215 KIAA0586Q9BVV6 1533 aa19.59■□□□□ 0.73
LSINCT5-201ENST00000626215 CTTNBP2Q8WZ74 1663 aa19.58■□□□□ 0.73
LSINCT5-201ENST00000626215 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
LSINCT5-201ENST00000626215 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
LSINCT5-201ENST00000626215 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
LSINCT5-201ENST00000626215 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
LSINCT5-201ENST00000626215 BCL11AQ9H165 835 aa19.54■□□□□ 0.72
LSINCT5-201ENST00000626215 IQGAP2Q13576 1575 aa19.53■□□□□ 0.72
LSINCT5-201ENST00000626215 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
LSINCT5-201ENST00000626215 UGGT2Q9NYU1 1516 aa19.45■□□□□ 0.7
LSINCT5-201ENST00000626215 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
LSINCT5-201ENST00000626215 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
LSINCT5-201ENST00000626215 ERCC6L2Q5T890 1561 aa19.43■□□□□ 0.7
LSINCT5-201ENST00000626215 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
LSINCT5-201ENST00000626215 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
LSINCT5-201ENST00000626215 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
LSINCT5-201ENST00000626215 DISP1Q96F81 1524 aa19.36■□□□□ 0.69
LSINCT5-201ENST00000626215 KIAA0556O60303 1618 aa19.35■□□□□ 0.69
LSINCT5-201ENST00000626215 CARMIL2Q6F5E8 1435 aa19.33■□□□□ 0.69
LSINCT5-201ENST00000626215 SAMD9Q5K651 1589 aa19.33■□□□□ 0.68
LSINCT5-201ENST00000626215 EFCAB5A4FU69 1503 aa19.27■□□□□ 0.68
LSINCT5-201ENST00000626215 TNIKQ9UKE5 1360 aa19.26■□□□□ 0.67
LSINCT5-201ENST00000626215 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
LSINCT5-201ENST00000626215 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.66
LSINCT5-201ENST00000626215 PTPRGP23470 1445 aa19.2■□□□□ 0.66
LSINCT5-201ENST00000626215 ADCY10Q96PN6 1610 aa19.17■□□□□ 0.66
LSINCT5-201ENST00000626215 UHRF1BP1LA0JNW5 1464 aa19.15■□□□□ 0.66
LSINCT5-201ENST00000626215 ARHGAP35Q9NRY4 1499 aa19.15■□□□□ 0.66
LSINCT5-201ENST00000626215 ABCA8O94911 1581 aa19.13■□□□□ 0.65
LSINCT5-201ENST00000626215 ABCC2Q92887 1545 aa19.12■□□□□ 0.65
LSINCT5-201ENST00000626215 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
LSINCT5-201ENST00000626215 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
LSINCT5-201ENST00000626215 FHOD3Q2V2M9 1422 aa19.1■□□□□ 0.65
LSINCT5-201ENST00000626215 RAPGEF6Q8TEU7 1601 aa19.07■□□□□ 0.64
LSINCT5-201ENST00000626215 CLIP1P30622 1438 aa19.07■□□□□ 0.64
LSINCT5-201ENST00000626215 PLB1Q6P1J6 1458 aa19.06■□□□□ 0.64
LSINCT5-201ENST00000626215 PPARGC1BQ86YN6 1023 aaKnown RBP19.05■□□□□ 0.64
LSINCT5-201ENST00000626215 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
LSINCT5-201ENST00000626215 RANGAP1P46060 587 aaPredicted RBP19.04■□□□□ 0.64
LSINCT5-201ENST00000626215 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
LSINCT5-201ENST00000626215 KDM5BQ9UGL1 1544 aa19.04■□□□□ 0.64
LSINCT5-201ENST00000626215 FMN1Q68DA7 1419 aa19.03■□□□□ 0.64
LSINCT5-201ENST00000626215 MAPKBP1O60336 1514 aa19.03■□□□□ 0.64
LSINCT5-201ENST00000626215 ZCCHC11Q5TAX3 1644 aaKnown RBP19.01■□□□□ 0.63
LSINCT5-201ENST00000626215 AMER1Q5JTC6 1135 aaPredicted RBP19.01■□□□□ 0.63
LSINCT5-201ENST00000626215 CENPBP07199 599 aaPredicted RBP18.97■□□□□ 0.63
LSINCT5-201ENST00000626215 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
LSINCT5-201ENST00000626215 HECW1Q76N89 1606 aa18.96■□□□□ 0.63
LSINCT5-201ENST00000626215 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
LSINCT5-201ENST00000626215 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
LSINCT5-201ENST00000626215 ARXQ96QS3 562 aa18.92■□□□□ 0.62
LSINCT5-201ENST00000626215 CASKIN1Q8WXD9 1431 aa18.91■□□□□ 0.62
LSINCT5-201ENST00000626215 ATP10BO94823 1461 aa18.91■□□□□ 0.62
LSINCT5-201ENST00000626215 LRRIQ1Q96JM4 1722 aa18.91■□□□□ 0.62
LSINCT5-201ENST00000626215 FYCO1Q9BQS8 1478 aa18.9■□□□□ 0.62
LSINCT5-201ENST00000626215 KIF13AQ9H1H9 1805 aa18.88■□□□□ 0.61
LSINCT5-201ENST00000626215 ASXL2Q76L83 1435 aa18.88■□□□□ 0.61
LSINCT5-201ENST00000626215 DIP2BQ9P265 1576 aa18.87■□□□□ 0.61
LSINCT5-201ENST00000626215 ABCC10Q5T3U5 1492 aa18.86■□□□□ 0.61
LSINCT5-201ENST00000626215 EPRSP07814 1512 aaKnown RBP18.86■□□□□ 0.61
LSINCT5-201ENST00000626215 WDR7Q9Y4E6 1490 aa18.85■□□□□ 0.61
LSINCT5-201ENST00000626215 GLI2P10070 1586 aa18.84■□□□□ 0.61
LSINCT5-201ENST00000626215 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
LSINCT5-201ENST00000626215 CDK13Q14004 1512 aaKnown RBP18.82■□□□□ 0.6
LSINCT5-201ENST00000626215 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
LSINCT5-201ENST00000626215 TIMELESSQ9UNS1 1208 aa18.77■□□□□ 0.6
LSINCT5-201ENST00000626215 MAP3K4Q9Y6R4 1608 aa18.76■□□□□ 0.59
LSINCT5-201ENST00000626215 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
LSINCT5-201ENST00000626215 ARID3CA6NKF2 412 aa18.74■□□□□ 0.59
LSINCT5-201ENST00000626215 ABCA9Q8IUA7 1624 aa18.73■□□□□ 0.59
LSINCT5-201ENST00000626215 KCNA4P22459 653 aa18.73■□□□□ 0.59
LSINCT5-201ENST00000626215 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
LSINCT5-201ENST00000626215 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
LSINCT5-201ENST00000626215 PPRC1Q5VV67 1664 aaKnown RBP18.7■□□□□ 0.58
LSINCT5-201ENST00000626215 PLEKHD1A6NEE1 506 aa18.7■□□□□ 0.58
LSINCT5-201ENST00000626215 ATP1B4Q9UN42 357 aaPredicted RBP18.7■□□□□ 0.58
LSINCT5-201ENST00000626215 MAGI3Q5TCQ9 1506 aa18.7■□□□□ 0.58
LSINCT5-201ENST00000626215 TROQ12816 1431 aaPredicted RBP18.7■□□□□ 0.58
LSINCT5-201ENST00000626215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
LSINCT5-201ENST00000626215 FAM69CQ0P6D2 419 aa18.7■□□□□ 0.58
LSINCT5-201ENST00000626215 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
LSINCT5-201ENST00000626215 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
LSINCT5-201ENST00000626215 CDK11AQ9UQ88 783 aaPredicted RBP18.69■□□□□ 0.58
LSINCT5-201ENST00000626215 KIF14Q15058 1648 aa18.68■□□□□ 0.58
LSINCT5-201ENST00000626215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.58
LSINCT5-201ENST00000626215 EHBP1L1Q8N3D4 1523 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms