RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ERCC6L2Q5T890 1561 aa18.57■□□□□ 0.56
SSBP4-215ENST00000625926 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
SSBP4-215ENST00000625926 SHROOM2Q13796 1616 aa18.53■□□□□ 0.56
SSBP4-215ENST00000625926 KIAA0586Q9BVV6 1533 aa18.52■□□□□ 0.56
SSBP4-215ENST00000625926 CUL7Q14999 1698 aa18.48■□□□□ 0.55
SSBP4-215ENST00000625926 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
SSBP4-215ENST00000625926 NPM1P06748 294 aaKnown RBP eCLIP18.4■□□□□ 0.54
SSBP4-215ENST00000625926 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
SSBP4-215ENST00000625926 PTPRGP23470 1445 aa18.35■□□□□ 0.53
SSBP4-215ENST00000625926 CARMIL2Q6F5E8 1435 aa18.35■□□□□ 0.53
SSBP4-215ENST00000625926 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.53
SSBP4-215ENST00000625926 TNIKQ9UKE5 1360 aa18.31■□□□□ 0.52
SSBP4-215ENST00000625926 IQGAP2Q13576 1575 aa18.29■□□□□ 0.52
SSBP4-215ENST00000625926 FAM69CQ0P6D2 419 aa18.26■□□□□ 0.51
SSBP4-215ENST00000625926 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
SSBP4-215ENST00000625926 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
SSBP4-215ENST00000625926 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
SSBP4-215ENST00000625926 UGGT2Q9NYU1 1516 aa18.22■□□□□ 0.51
SSBP4-215ENST00000625926 ADCY10Q96PN6 1610 aa18.21■□□□□ 0.51
SSBP4-215ENST00000625926 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
SSBP4-215ENST00000625926 MAPKBP1O60336 1514 aa18.2■□□□□ 0.5
SSBP4-215ENST00000625926 UACAQ9BZF9 1416 aa18.19■□□□□ 0.5
SSBP4-215ENST00000625926 UHRF1BP1LA0JNW5 1464 aa18.16■□□□□ 0.5
SSBP4-215ENST00000625926 ABCC2Q92887 1545 aa18.16■□□□□ 0.5
SSBP4-215ENST00000625926 EEA1Q15075 1411 aa18.15■□□□□ 0.5
SSBP4-215ENST00000625926 GOLGA3Q08378 1498 aa18.13■□□□□ 0.49
SSBP4-215ENST00000625926 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
SSBP4-215ENST00000625926 KIAA0556O60303 1618 aa18.11■□□□□ 0.49
SSBP4-215ENST00000625926 PLB1Q6P1J6 1458 aa18.09■□□□□ 0.49
SSBP4-215ENST00000625926 ASXL2Q76L83 1435 aa18.09■□□□□ 0.49
SSBP4-215ENST00000625926 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
SSBP4-215ENST00000625926 DIP2BQ9P265 1576 aa18.08■□□□□ 0.48
SSBP4-215ENST00000625926 KDM5BQ9UGL1 1544 aa18.07■□□□□ 0.48
SSBP4-215ENST00000625926 P3H3Q8IVL6 736 aa18.05■□□□□ 0.48
SSBP4-215ENST00000625926 KIF13AQ9H1H9 1805 aa18.03■□□□□ 0.48
SSBP4-215ENST00000625926 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
SSBP4-215ENST00000625926 KDM4FA0A1W2PPD8 638 aa17.98■□□□□ 0.47
SSBP4-215ENST00000625926 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-215ENST00000625926 EPRSP07814 1512 aaKnown RBP17.97■□□□□ 0.47
SSBP4-215ENST00000625926 GLI2P10070 1586 aa17.96■□□□□ 0.46
SSBP4-215ENST00000625926 ABCA8O94911 1581 aa17.95■□□□□ 0.46
SSBP4-215ENST00000625926 KCNH8Q96L42 1107 aa17.94■□□□□ 0.46
SSBP4-215ENST00000625926 WDR7Q9Y4E6 1490 aa17.94■□□□□ 0.46
SSBP4-215ENST00000625926 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
SSBP4-215ENST00000625926 ARID3CA6NKF2 412 aa17.92■□□□□ 0.46
SSBP4-215ENST00000625926 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
SSBP4-215ENST00000625926 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
SSBP4-215ENST00000625926 ATP10BO94823 1461 aa17.88■□□□□ 0.45
SSBP4-215ENST00000625926 SAMD9Q5K651 1589 aa17.87■□□□□ 0.45
SSBP4-215ENST00000625926 KIF21BO75037 1637 aa17.87■□□□□ 0.45
SSBP4-215ENST00000625926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-215ENST00000625926 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
SSBP4-215ENST00000625926 KDM6BO15054 1643 aa17.87■□□□□ 0.45
SSBP4-215ENST00000625926 FHOD3Q2V2M9 1422 aa17.86■□□□□ 0.45
SSBP4-215ENST00000625926 TEX14Q8IWB6 1497 aa17.86■□□□□ 0.45
SSBP4-215ENST00000625926 CD109Q6YHK3 1445 aa17.84■□□□□ 0.45
SSBP4-215ENST00000625926 TSPOAP1O95153 1857 aa17.81■□□□□ 0.44
SSBP4-215ENST00000625926 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
SSBP4-215ENST00000625926 COL17A1Q9UMD9 1497 aaPredicted RBP17.8■□□□□ 0.44
SSBP4-215ENST00000625926 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
SSBP4-215ENST00000625926 MAGI3Q5TCQ9 1506 aa17.78■□□□□ 0.44
SSBP4-215ENST00000625926 NUP153P49790 1475 aaKnown RBP17.78■□□□□ 0.44
SSBP4-215ENST00000625926 PLEKHD1A6NEE1 506 aa17.78■□□□□ 0.44
SSBP4-215ENST00000625926 PPRC1Q5VV67 1664 aaKnown RBP17.77■□□□□ 0.44
SSBP4-215ENST00000625926 RAPGEF6Q8TEU7 1601 aa17.76■□□□□ 0.43
SSBP4-215ENST00000625926 FBXO41Q8TF61 875 aa17.74■□□□□ 0.43
SSBP4-215ENST00000625926 HECW2Q9P2P5 1572 aa17.73■□□□□ 0.43
SSBP4-215ENST00000625926 ATP1B4Q9UN42 357 aaPredicted RBP17.71■□□□□ 0.43
SSBP4-215ENST00000625926 FMN1Q68DA7 1419 aa17.7■□□□□ 0.42
SSBP4-215ENST00000625926 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
SSBP4-215ENST00000625926 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
SSBP4-215ENST00000625926 CFAP43Q8NDM7 1665 aa17.69■□□□□ 0.42
SSBP4-215ENST00000625926 LMTK3Q96Q04 1460 aa17.68■□□□□ 0.42
SSBP4-215ENST00000625926 CDK11AQ9UQ88 783 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-215ENST00000625926 ABCA9Q8IUA7 1624 aa17.64■□□□□ 0.41
SSBP4-215ENST00000625926 ARAP3Q8WWN8 1544 aa17.63■□□□□ 0.41
SSBP4-215ENST00000625926 NEO1Q92859 1461 aa17.62■□□□□ 0.41
SSBP4-215ENST00000625926 RAPGEF3O95398 923 aa17.61■□□□□ 0.41
SSBP4-215ENST00000625926 CDK13Q14004 1512 aaKnown RBP17.59■□□□□ 0.41
SSBP4-215ENST00000625926 ADGRL1O94910 1474 aa17.56■□□□□ 0.4
SSBP4-215ENST00000625926 SOCS7O14512 581 aa17.56■□□□□ 0.4
SSBP4-215ENST00000625926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■■□□□ 13.7
SSBP4-215ENST00000625926 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
SSBP4-215ENST00000625926 AKNAQ7Z591 1439 aa17.54■□□□□ 0.4
SSBP4-215ENST00000625926 FANCAO15360 1455 aa17.53■□□□□ 0.4
SSBP4-215ENST00000625926 CLIP1P30622 1438 aa17.53■□□□□ 0.4
SSBP4-215ENST00000625926 PLCH2O75038 1416 aa17.52■□□□□ 0.4
SSBP4-215ENST00000625926 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
SSBP4-215ENST00000625926 DENND4BO75064 1496 aaPredicted RBP17.5■□□□□ 0.39
SSBP4-215ENST00000625926 TROQ12816 1431 aaPredicted RBP17.5■□□□□ 0.39
SSBP4-215ENST00000625926 EFCAB2Q5VUJ9 269 aa17.5■□□□□ 0.39
SSBP4-215ENST00000625926 ILDR2Q71H61 639 aa17.49■□□□□ 0.39
SSBP4-215ENST00000625926 TTC37Q6PGP7 1564 aa17.47■□□□□ 0.39
SSBP4-215ENST00000625926 CCDC18Q5T9S5 1454 aa17.45■□□□□ 0.38
SSBP4-215ENST00000625926 SCAPERQ9BY12 1400 aa17.45■□□□□ 0.38
SSBP4-215ENST00000625926 ARID4BQ4LE39 1312 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-215ENST00000625926 FYCO1Q9BQS8 1478 aa17.42■□□□□ 0.38
SSBP4-215ENST00000625926 CFAP74Q9C0B2 1584 aa17.41■□□□□ 0.38
SSBP4-215ENST00000625926 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
SSBP4-215ENST00000625926 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms