RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
VARS2-213ENST00000625423 ATP1B4Q9UN42 357 aaPredicted RBP16.36■□□□□ 0.21
VARS2-213ENST00000625423 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
VARS2-213ENST00000625423 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
VARS2-213ENST00000625423 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
VARS2-213ENST00000625423 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
VARS2-213ENST00000625423 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
VARS2-213ENST00000625423 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
VARS2-213ENST00000625423 PCF11O94913 1555 aaKnown RBP16.31■□□□□ 0.2
VARS2-213ENST00000625423 FHOD3Q2V2M9 1422 aa16.31■□□□□ 0.2
VARS2-213ENST00000625423 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
VARS2-213ENST00000625423 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
VARS2-213ENST00000625423 ABCA10Q8WWZ4 1543 aa16.3■□□□□ 0.2
VARS2-213ENST00000625423 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
VARS2-213ENST00000625423 NESP48681 1621 aa16.28■□□□□ 0.2
VARS2-213ENST00000625423 CFAP43Q8NDM7 1665 aa16.27■□□□□ 0.19
VARS2-213ENST00000625423 SIN3AQ96ST3 1273 aa16.24■□□□□ 0.19
VARS2-213ENST00000625423 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
VARS2-213ENST00000625423 EFCAB5A4FU69 1503 aa16.22■□□□□ 0.19
VARS2-213ENST00000625423 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
VARS2-213ENST00000625423 CUL7Q14999 1698 aa16.2■□□□□ 0.18
VARS2-213ENST00000625423 AQRO60306 1485 aaKnown RBP eCLIP16.19■□□□□ 0.184e-6■■■■□ 23.2
VARS2-213ENST00000625423 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
VARS2-213ENST00000625423 FMN1Q68DA7 1419 aa16.16■□□□□ 0.18
VARS2-213ENST00000625423 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
VARS2-213ENST00000625423 CTTNBP2Q8WZ74 1663 aa16.16■□□□□ 0.18
VARS2-213ENST00000625423 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
VARS2-213ENST00000625423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.18
VARS2-213ENST00000625423 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
VARS2-213ENST00000625423 SNAPC4Q5SXM2 1469 aa16.13■□□□□ 0.17
VARS2-213ENST00000625423 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
VARS2-213ENST00000625423 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
VARS2-213ENST00000625423 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
VARS2-213ENST00000625423 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
VARS2-213ENST00000625423 SUPT16HQ9Y5B9 1047 aaKnown RBP16.1■□□□□ 0.17
VARS2-213ENST00000625423 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
VARS2-213ENST00000625423 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
VARS2-213ENST00000625423 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.17
VARS2-213ENST00000625423 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
VARS2-213ENST00000625423 ABCA5Q8WWZ7 1642 aa16.07■□□□□ 0.16
VARS2-213ENST00000625423 PTPRKQ15262 1439 aa16.06■□□□□ 0.16
VARS2-213ENST00000625423 SAMD9Q5K651 1589 aa16.05■□□□□ 0.16
VARS2-213ENST00000625423 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
VARS2-213ENST00000625423 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
VARS2-213ENST00000625423 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
VARS2-213ENST00000625423 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
VARS2-213ENST00000625423 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
VARS2-213ENST00000625423 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
VARS2-213ENST00000625423 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
VARS2-213ENST00000625423 TONSLQ96HA7 1378 aa16.01■□□□□ 0.15
VARS2-213ENST00000625423 UACAQ9BZF9 1416 aa16■□□□□ 0.15
VARS2-213ENST00000625423 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
VARS2-213ENST00000625423 NAIPQ13075 1403 aa15.98■□□□□ 0.15
VARS2-213ENST00000625423 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
VARS2-213ENST00000625423 EHBP1L1Q8N3D4 1523 aa15.96■□□□□ 0.15
VARS2-213ENST00000625423 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.14
VARS2-213ENST00000625423 KIF21AQ7Z4S6 1674 aa15.94■□□□□ 0.14
VARS2-213ENST00000625423 MAGI3Q5TCQ9 1506 aa15.93■□□□□ 0.14
VARS2-213ENST00000625423 ANP32CO43423 234 aa15.93■□□□□ 0.14
VARS2-213ENST00000625423 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
VARS2-213ENST00000625423 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
VARS2-213ENST00000625423 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
VARS2-213ENST00000625423 CHIC2Q9UKJ5 165 aa15.92■□□□□ 0.14
VARS2-213ENST00000625423 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
VARS2-213ENST00000625423 CCER2I3L3R5 266 aa15.9■□□□□ 0.14
VARS2-213ENST00000625423 ARID3CA6NKF2 412 aa15.87■□□□□ 0.13
VARS2-213ENST00000625423 TCOF1Q13428 1488 aaKnown RBP15.86■□□□□ 0.13
VARS2-213ENST00000625423 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
VARS2-213ENST00000625423 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
VARS2-213ENST00000625423 EPRSP07814 1512 aaKnown RBP15.86■□□□□ 0.13
VARS2-213ENST00000625423 IQGAP2Q13576 1575 aa15.85■□□□□ 0.13
VARS2-213ENST00000625423 BCANQ96GW7 911 aa15.85■□□□□ 0.13
VARS2-213ENST00000625423 KDM5BQ9UGL1 1544 aa15.85■□□□□ 0.13
VARS2-213ENST00000625423 FKBP8Q14318 412 aa15.84■□□□□ 0.13
VARS2-213ENST00000625423 PBRM1Q86U86 1689 aa15.84■□□□□ 0.13
VARS2-213ENST00000625423 MYT1Q01538 1121 aa15.84■□□□□ 0.13
VARS2-213ENST00000625423 CDK13Q14004 1512 aaKnown RBP15.84■□□□□ 0.13
VARS2-213ENST00000625423 FBLN2P98095 1184 aa15.84■□□□□ 0.13
VARS2-213ENST00000625423 TSHZ2Q9NRE2 1034 aa15.83■□□□□ 0.13
VARS2-213ENST00000625423 DENND4BO75064 1496 aaPredicted RBP15.82■□□□□ 0.12
VARS2-213ENST00000625423 ADAMTS12P58397 1594 aa15.82■□□□□ 0.12
VARS2-213ENST00000625423 KDM6BO15054 1643 aa15.8■□□□□ 0.12
VARS2-213ENST00000625423 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
VARS2-213ENST00000625423 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
VARS2-213ENST00000625423 GCC2Q8IWJ2 1684 aa15.79■□□□□ 0.12
VARS2-213ENST00000625423 WDR62O43379 1518 aa15.79■□□□□ 0.12
VARS2-213ENST00000625423 AKNAQ7Z591 1439 aa15.79■□□□□ 0.12
VARS2-213ENST00000625423 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
VARS2-213ENST00000625423 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
VARS2-213ENST00000625423 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
VARS2-213ENST00000625423 FOXD1Q16676 465 aa15.76■□□□□ 0.11
VARS2-213ENST00000625423 NEFLP07196 543 aa15.75■□□□□ 0.11
VARS2-213ENST00000625423 WASHC2AQ641Q2 1341 aa15.75■□□□□ 0.11
VARS2-213ENST00000625423 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
VARS2-213ENST00000625423 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
VARS2-213ENST00000625423 EIF4G2P78344 907 aaKnown RBP eCLIP15.73■□□□□ 0.11
VARS2-213ENST00000625423 ZNF644Q9H582 1327 aaPredicted RBP15.71■□□□□ 0.11
VARS2-213ENST00000625423 DAPK1P53355 1430 aa15.71■□□□□ 0.11
VARS2-213ENST00000625423 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
VARS2-213ENST00000625423 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms