RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
LINC00963-220ENST00000625171 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
LINC00963-220ENST00000625171 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
LINC00963-220ENST00000625171 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
LINC00963-220ENST00000625171 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
LINC00963-220ENST00000625171 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
LINC00963-220ENST00000625171 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
LINC00963-220ENST00000625171 ADAMTS12P58397 1594 aa18.79■□□□□ 0.6
LINC00963-220ENST00000625171 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
LINC00963-220ENST00000625171 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
LINC00963-220ENST00000625171 CLIP1P30622 1438 aa18.72■□□□□ 0.59
LINC00963-220ENST00000625171 GRIN2AQ12879 1464 aa18.69■□□□□ 0.58
LINC00963-220ENST00000625171 KIAA0586Q9BVV6 1533 aa18.64■□□□□ 0.58
LINC00963-220ENST00000625171 NUP160Q12769 1436 aa18.63■□□□□ 0.57
LINC00963-220ENST00000625171 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
LINC00963-220ENST00000625171 EFCAB5A4FU69 1503 aa18.6■□□□□ 0.57
LINC00963-220ENST00000625171 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
LINC00963-220ENST00000625171 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
LINC00963-220ENST00000625171 IQGAP2Q13576 1575 aa18.55■□□□□ 0.56
LINC00963-220ENST00000625171 UGGT2Q9NYU1 1516 aa18.55■□□□□ 0.56
LINC00963-220ENST00000625171 SAMD9Q5K651 1589 aa18.52■□□□□ 0.56
LINC00963-220ENST00000625171 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
LINC00963-220ENST00000625171 ERCC6L2Q5T890 1561 aa18.5■□□□□ 0.55
LINC00963-220ENST00000625171 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
LINC00963-220ENST00000625171 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
LINC00963-220ENST00000625171 FMN1Q68DA7 1419 aa18.45■□□□□ 0.54
LINC00963-220ENST00000625171 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
LINC00963-220ENST00000625171 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
LINC00963-220ENST00000625171 DISP1Q96F81 1524 aa18.41■□□□□ 0.54
LINC00963-220ENST00000625171 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
LINC00963-220ENST00000625171 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
LINC00963-220ENST00000625171 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
LINC00963-220ENST00000625171 KIAA0556O60303 1618 aa18.36■□□□□ 0.53
LINC00963-220ENST00000625171 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
LINC00963-220ENST00000625171 FYCO1Q9BQS8 1478 aa18.34■□□□□ 0.53
LINC00963-220ENST00000625171 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.53
LINC00963-220ENST00000625171 APLP2Q06481 763 aa18.33■□□□□ 0.52
LINC00963-220ENST00000625171 P3H3Q8IVL6 736 aa18.33■□□□□ 0.52
LINC00963-220ENST00000625171 ABCC10Q5T3U5 1492 aa18.29■□□□□ 0.52
LINC00963-220ENST00000625171 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
LINC00963-220ENST00000625171 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
LINC00963-220ENST00000625171 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
LINC00963-220ENST00000625171 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
LINC00963-220ENST00000625171 PCF11O94913 1555 aaKnown RBP18.24■□□□□ 0.51
LINC00963-220ENST00000625171 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
LINC00963-220ENST00000625171 DIP2BQ9P265 1576 aa18.21■□□□□ 0.51
LINC00963-220ENST00000625171 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
LINC00963-220ENST00000625171 PTPRGP23470 1445 aa18.2■□□□□ 0.5
LINC00963-220ENST00000625171 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
LINC00963-220ENST00000625171 KANK4Q5T7N3 995 aaPredicted RBP18.17■□□□□ 0.5
LINC00963-220ENST00000625171 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
LINC00963-220ENST00000625171 ADCY10Q96PN6 1610 aa18.16■□□□□ 0.5
LINC00963-220ENST00000625171 ABCA8O94911 1581 aa18.16■□□□□ 0.5
LINC00963-220ENST00000625171 CFAP43Q8NDM7 1665 aa18.15■□□□□ 0.5
LINC00963-220ENST00000625171 EPRSP07814 1512 aaKnown RBP18.15■□□□□ 0.5
LINC00963-220ENST00000625171 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
LINC00963-220ENST00000625171 KDM6BO15054 1643 aa18.14■□□□□ 0.49
LINC00963-220ENST00000625171 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
LINC00963-220ENST00000625171 PLB1Q6P1J6 1458 aa18.11■□□□□ 0.49
LINC00963-220ENST00000625171 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
LINC00963-220ENST00000625171 UHRF1BP1LA0JNW5 1464 aa18.09■□□□□ 0.49
LINC00963-220ENST00000625171 KDM4FA0A1W2PPD8 638 aa18.09■□□□□ 0.49
LINC00963-220ENST00000625171 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
LINC00963-220ENST00000625171 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
LINC00963-220ENST00000625171 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
LINC00963-220ENST00000625171 LRRIQ1Q96JM4 1722 aa18.06■□□□□ 0.48
LINC00963-220ENST00000625171 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
LINC00963-220ENST00000625171 EHBP1L1Q8N3D4 1523 aa18.04■□□□□ 0.48
LINC00963-220ENST00000625171 PCGF6Q9BYE7 350 aa18.04■□□□□ 0.48
LINC00963-220ENST00000625171 ATP10BO94823 1461 aa18.03■□□□□ 0.48
LINC00963-220ENST00000625171 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
LINC00963-220ENST00000625171 ABCC2Q92887 1545 aa18.03■□□□□ 0.48
LINC00963-220ENST00000625171 CDK13Q14004 1512 aaKnown RBP18■□□□□ 0.47
LINC00963-220ENST00000625171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18■□□□□ 0.47
LINC00963-220ENST00000625171 TSPOAP1O95153 1857 aa17.99■□□□□ 0.47
LINC00963-220ENST00000625171 MAGI3Q5TCQ9 1506 aa17.98■□□□□ 0.47
LINC00963-220ENST00000625171 GLI2P10070 1586 aa17.98■□□□□ 0.47
LINC00963-220ENST00000625171 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
LINC00963-220ENST00000625171 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
LINC00963-220ENST00000625171 PLEKHD1A6NEE1 506 aa17.97■□□□□ 0.47
LINC00963-220ENST00000625171 PHLDB1Q86UU1 1377 aa17.96■□□□□ 0.47
LINC00963-220ENST00000625171 TTBK1Q5TCY1 1321 aaPredicted RBP17.96■□□□□ 0.46
LINC00963-220ENST00000625171 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
LINC00963-220ENST00000625171 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
LINC00963-220ENST00000625171 ASXL2Q76L83 1435 aa17.94■□□□□ 0.46
LINC00963-220ENST00000625171 CCNB3Q8WWL7 1395 aa17.93■□□□□ 0.46
LINC00963-220ENST00000625171 MYOM3Q5VTT5 1437 aa17.91■□□□□ 0.46
LINC00963-220ENST00000625171 MIA2Q96PC5 1412 aa17.91■□□□□ 0.46
LINC00963-220ENST00000625171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
LINC00963-220ENST00000625171 HNRNPUL2Q1KMD3 747 aaKnown RBP17.9■□□□□ 0.46
LINC00963-220ENST00000625171 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
LINC00963-220ENST00000625171 PPRC1Q5VV67 1664 aaKnown RBP17.9■□□□□ 0.46
LINC00963-220ENST00000625171 ADGRL1O94910 1474 aa17.88■□□□□ 0.45
LINC00963-220ENST00000625171 FGD6Q6ZV73 1430 aa17.87■□□□□ 0.45
LINC00963-220ENST00000625171 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
LINC00963-220ENST00000625171 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
LINC00963-220ENST00000625171 TCOF1Q13428 1488 aaKnown RBP17.83■□□□□ 0.45
LINC00963-220ENST00000625171 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.44
LINC00963-220ENST00000625171 ZCCHC11Q5TAX3 1644 aaKnown RBP17.82■□□□□ 0.44
LINC00963-220ENST00000625171 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms