RNA–Protein interactions for RNA: ENST00000625000.1

AC002090.1-201, humanhuman

BASIC

Gene AC002090.1, Length 2,138 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002090.1-201ENST00000625000 RAD21O60216 631 aa13.57□□□□□ -0.24
AC002090.1-201ENST00000625000 MYCNP04198 464 aaPredicted RBP13.57□□□□□ -0.24
AC002090.1-201ENST00000625000 CHGAP10645 457 aaKnown RBP13.56□□□□□ -0.24
AC002090.1-201ENST00000625000 LMOD2Q6P5Q4 547 aa13.53□□□□□ -0.24
AC002090.1-201ENST00000625000 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
AC002090.1-201ENST00000625000 MTMR7Q9Y216 660 aa13.49□□□□□ -0.25
AC002090.1-201ENST00000625000 APBB1O00213 710 aa13.48□□□□□ -0.25
AC002090.1-201ENST00000625000 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
AC002090.1-201ENST00000625000 RBM25P49756 843 aaKnown RBP13.46□□□□□ -0.26
AC002090.1-201ENST00000625000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.46□□□□□ -0.26
AC002090.1-201ENST00000625000 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.26
AC002090.1-201ENST00000625000 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.26
AC002090.1-201ENST00000625000 POLR3GLQ9BT43 218 aa13.45□□□□□ -0.26
AC002090.1-201ENST00000625000 FOXD4L5Q5VV16 416 aaPredicted RBP13.44□□□□□ -0.26
AC002090.1-201ENST00000625000 FOXD4L4Q8WXT5 416 aaPredicted RBP13.44□□□□□ -0.26
AC002090.1-201ENST00000625000 PDE4CQ08493 712 aa13.42□□□□□ -0.26
AC002090.1-201ENST00000625000 PIAS4Q8N2W9 510 aaPredicted RBP13.42□□□□□ -0.26
AC002090.1-201ENST00000625000 SLC24A3Q9HC58 644 aa13.39□□□□□ -0.27
AC002090.1-201ENST00000625000 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
AC002090.1-201ENST00000625000 BCL11AQ9H165 835 aa13.34□□□□□ -0.27
AC002090.1-201ENST00000625000 PROM2Q8N271 834 aa13.34□□□□□ -0.27
AC002090.1-201ENST00000625000 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
AC002090.1-201ENST00000625000 AEBP1Q8IUX7 1158 aa13.31□□□□□ -0.28
AC002090.1-201ENST00000625000 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
AC002090.1-201ENST00000625000 USP35Q9P2H5 1018 aa13.27□□□□□ -0.28
AC002090.1-201ENST00000625000 ZC3H15Q8WU90 426 aaKnown RBP13.27□□□□□ -0.29
AC002090.1-201ENST00000625000 SPOCK2Q92563 424 aa13.26□□□□□ -0.29
AC002090.1-201ENST00000625000 MFAP1P55081 439 aaKnown RBP13.24□□□□□ -0.29
AC002090.1-201ENST00000625000 TMCO4Q5TGY1 634 aa13.24□□□□□ -0.29
AC002090.1-201ENST00000625000 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.3
AC002090.1-201ENST00000625000 FAM177A1Q8N128 213 aaPredicted RBP13.2□□□□□ -0.3
AC002090.1-201ENST00000625000 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
AC002090.1-201ENST00000625000 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
AC002090.1-201ENST00000625000 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
AC002090.1-201ENST00000625000 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
AC002090.1-201ENST00000625000 IL27Q8NEV9 243 aa13.17□□□□□ -0.3
AC002090.1-201ENST00000625000 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
AC002090.1-201ENST00000625000 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
AC002090.1-201ENST00000625000 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
AC002090.1-201ENST00000625000 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
AC002090.1-201ENST00000625000 E9PSI1 815 aa13.13□□□□□ -0.31
AC002090.1-201ENST00000625000 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
AC002090.1-201ENST00000625000 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
AC002090.1-201ENST00000625000 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
AC002090.1-201ENST00000625000 CWC22Q9HCG8 908 aaKnown RBP13.08□□□□□ -0.32
AC002090.1-201ENST00000625000 NEFLP07196 543 aa13.07□□□□□ -0.32
AC002090.1-201ENST00000625000 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
AC002090.1-201ENST00000625000 WDR70Q9NW82 654 aa13.04□□□□□ -0.32
AC002090.1-201ENST00000625000 PPM1GO15355 546 aaPredicted RBP13.03□□□□□ -0.32
AC002090.1-201ENST00000625000 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
AC002090.1-201ENST00000625000 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
AC002090.1-201ENST00000625000 IRX6P78412 446 aaPredicted RBP12.99□□□□□ -0.33
AC002090.1-201ENST00000625000 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
AC002090.1-201ENST00000625000 ZNF592Q92610 1267 aa12.98□□□□□ -0.33
AC002090.1-201ENST00000625000 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
AC002090.1-201ENST00000625000 CERS3Q8IU89 383 aa12.95□□□□□ -0.34
AC002090.1-201ENST00000625000 CLUAP1Q96AJ1 413 aa12.94□□□□□ -0.34
AC002090.1-201ENST00000625000 IRF5Q13568 498 aa12.92□□□□□ -0.34
AC002090.1-201ENST00000625000 ZMYND10O75800 440 aa12.92□□□□□ -0.34
AC002090.1-201ENST00000625000 RETREG2Q8NC44 543 aa12.91□□□□□ -0.34
AC002090.1-201ENST00000625000 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
AC002090.1-201ENST00000625000 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.9□□□□□ -0.34
AC002090.1-201ENST00000625000 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
AC002090.1-201ENST00000625000 TRAK2O60296 914 aa12.88□□□□□ -0.35
AC002090.1-201ENST00000625000 KDM4CQ9H3R0 1056 aa12.88□□□□□ -0.35
AC002090.1-201ENST00000625000 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
AC002090.1-201ENST00000625000 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
AC002090.1-201ENST00000625000 TMED8Q6PL24 325 aaPredicted RBP12.87□□□□□ -0.35
AC002090.1-201ENST00000625000 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
AC002090.1-201ENST00000625000 RNF25Q96BH1 459 aaPredicted RBP12.87□□□□□ -0.35
AC002090.1-201ENST00000625000 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
AC002090.1-201ENST00000625000 NISCHQ9Y2I1 1504 aa12.87□□□□□ -0.35
AC002090.1-201ENST00000625000 TICAM2Q86XR7 235 aa12.86□□□□□ -0.35
AC002090.1-201ENST00000625000 PSMD1Q99460 953 aa12.86□□□□□ -0.35
AC002090.1-201ENST00000625000 CCDC125Q86Z20 511 aa12.83□□□□□ -0.35
AC002090.1-201ENST00000625000 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
AC002090.1-201ENST00000625000 SEMA3EO15041 775 aa12.79□□□□□ -0.36
AC002090.1-201ENST00000625000 ZNF777Q9ULD5 760 aaPredicted RBP12.78□□□□□ -0.36
AC002090.1-201ENST00000625000 FLIIQ13045 1269 aa12.77□□□□□ -0.36
AC002090.1-201ENST00000625000 FGD1P98174 961 aa12.77□□□□□ -0.37
AC002090.1-201ENST00000625000 ZNF526Q8TF50 670 aaPredicted RBP12.77□□□□□ -0.37
AC002090.1-201ENST00000625000 CCDC136Q96JN2 1154 aa12.77□□□□□ -0.37
AC002090.1-201ENST00000625000 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.37
AC002090.1-201ENST00000625000 ONECUT3O60422 494 aaPredicted RBP12.76□□□□□ -0.37
AC002090.1-201ENST00000625000 CLSTN1O94985 981 aa12.76□□□□□ -0.37
AC002090.1-201ENST00000625000 KDM4AO75164 1064 aa12.74□□□□□ -0.37
AC002090.1-201ENST00000625000 A6NJR5 290 aa12.74□□□□□ -0.37
AC002090.1-201ENST00000625000 CC2D2BQ6DHV5 1058 aa12.74□□□□□ -0.37
AC002090.1-201ENST00000625000 A0A0U1RQG5 324 aaPredicted RBP12.73□□□□□ -0.37
AC002090.1-201ENST00000625000 CADPS2Q86UW7 1296 aa12.71□□□□□ -0.37
AC002090.1-201ENST00000625000 CCDC27Q2M243 656 aa12.71□□□□□ -0.38
AC002090.1-201ENST00000625000 PRDM16Q9HAZ2 1276 aa12.71□□□□□ -0.38
AC002090.1-201ENST00000625000 POLA2Q14181 598 aa12.7□□□□□ -0.38
AC002090.1-201ENST00000625000 FAM117AQ9C073 453 aa12.7□□□□□ -0.38
AC002090.1-201ENST00000625000 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
AC002090.1-201ENST00000625000 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
AC002090.1-201ENST00000625000 SMARCA5O60264 1052 aaPredicted RBP12.68□□□□□ -0.38
AC002090.1-201ENST00000625000 AK7Q96M32 723 aa12.68□□□□□ -0.38
AC002090.1-201ENST00000625000 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
AC002090.1-201ENST00000625000 CCDC97Q96F63 343 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms