RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
LINC00963-218ENST00000624138 PRG4Q92954 1404 aaPredicted RBP13.44□□□□□ -0.26
LINC00963-218ENST00000624138 ERICH3Q5RHP9 1530 aa13.43□□□□□ -0.26
LINC00963-218ENST00000624138 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
LINC00963-218ENST00000624138 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
LINC00963-218ENST00000624138 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
LINC00963-218ENST00000624138 ADCY10Q96PN6 1610 aa13.41□□□□□ -0.26
LINC00963-218ENST00000624138 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
LINC00963-218ENST00000624138 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC00963-218ENST00000624138 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
LINC00963-218ENST00000624138 PPRC1Q5VV67 1664 aaKnown RBP13.32□□□□□ -0.28
LINC00963-218ENST00000624138 ADGRL1O94910 1474 aa13.27□□□□□ -0.29
LINC00963-218ENST00000624138 GLI2P10070 1586 aa13.25□□□□□ -0.29
LINC00963-218ENST00000624138 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
LINC00963-218ENST00000624138 KIAA0586Q9BVV6 1533 aa13.23□□□□□ -0.29
LINC00963-218ENST00000624138 CUL7Q14999 1698 aa13.21□□□□□ -0.29
LINC00963-218ENST00000624138 MAP3K4Q9Y6R4 1608 aa13.18□□□□□ -0.3
LINC00963-218ENST00000624138 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
LINC00963-218ENST00000624138 PLB1Q6P1J6 1458 aa13.17□□□□□ -0.3
LINC00963-218ENST00000624138 COL17A1Q9UMD9 1497 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-218ENST00000624138 PTPRGP23470 1445 aa13.16□□□□□ -0.3
LINC00963-218ENST00000624138 ASXL2Q76L83 1435 aa13.16□□□□□ -0.3
LINC00963-218ENST00000624138 UHRF1BP1LA0JNW5 1464 aa13.13□□□□□ -0.31
LINC00963-218ENST00000624138 IGF1RP08069 1367 aa13.12□□□□□ -0.31
LINC00963-218ENST00000624138 TNIKQ9UKE5 1360 aa13.12□□□□□ -0.31
LINC00963-218ENST00000624138 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
LINC00963-218ENST00000624138 EPRSP07814 1512 aaKnown RBP13.1□□□□□ -0.31
LINC00963-218ENST00000624138 CARMIL2Q6F5E8 1435 aa13.09□□□□□ -0.31
LINC00963-218ENST00000624138 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
LINC00963-218ENST00000624138 ZCCHC11Q5TAX3 1644 aaKnown RBP13.08□□□□□ -0.32
LINC00963-218ENST00000624138 KDM5BQ9UGL1 1544 aa13.08□□□□□ -0.32
LINC00963-218ENST00000624138 UACAQ9BZF9 1416 aa13.06□□□□□ -0.32
LINC00963-218ENST00000624138 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
LINC00963-218ENST00000624138 TTBK1Q5TCY1 1321 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-218ENST00000624138 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
LINC00963-218ENST00000624138 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
LINC00963-218ENST00000624138 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
LINC00963-218ENST00000624138 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.32
LINC00963-218ENST00000624138 CARMIL1Q5VZK9 1371 aa13.01□□□□□ -0.33
LINC00963-218ENST00000624138 KIF21BO75037 1637 aa13□□□□□ -0.33
LINC00963-218ENST00000624138 MAGI3Q5TCQ9 1506 aa12.98□□□□□ -0.33
LINC00963-218ENST00000624138 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
LINC00963-218ENST00000624138 WDR7Q9Y4E6 1490 aa12.97□□□□□ -0.33
LINC00963-218ENST00000624138 ADAMTSL3P82987 1691 aa12.96□□□□□ -0.34
LINC00963-218ENST00000624138 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
LINC00963-218ENST00000624138 CD109Q6YHK3 1445 aa12.93□□□□□ -0.34
LINC00963-218ENST00000624138 PTPRMP28827 1452 aa12.91□□□□□ -0.34
LINC00963-218ENST00000624138 ARAP3Q8WWN8 1544 aa12.9□□□□□ -0.34
LINC00963-218ENST00000624138 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
LINC00963-218ENST00000624138 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
LINC00963-218ENST00000624138 ABCA8O94911 1581 aa12.87□□□□□ -0.35
LINC00963-218ENST00000624138 PCF11O94913 1555 aaKnown RBP12.86□□□□□ -0.35
LINC00963-218ENST00000624138 RAPGEF2Q9Y4G8 1499 aa12.85□□□□□ -0.35
LINC00963-218ENST00000624138 KCNH8Q96L42 1107 aa12.85□□□□□ -0.35
LINC00963-218ENST00000624138 LMTK3Q96Q04 1460 aa12.85□□□□□ -0.35
LINC00963-218ENST00000624138 MADDQ8WXG6 1647 aa12.83□□□□□ -0.36
LINC00963-218ENST00000624138 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
LINC00963-218ENST00000624138 ABCA9Q8IUA7 1624 aa12.81□□□□□ -0.36
LINC00963-218ENST00000624138 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
LINC00963-218ENST00000624138 GOLGA3Q08378 1498 aa12.79□□□□□ -0.36
LINC00963-218ENST00000624138 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
LINC00963-218ENST00000624138 NEO1Q92859 1461 aa12.75□□□□□ -0.37
LINC00963-218ENST00000624138 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
LINC00963-218ENST00000624138 RAPGEF3O95398 923 aa12.74□□□□□ -0.37
LINC00963-218ENST00000624138 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
LINC00963-218ENST00000624138 ATP10BO94823 1461 aa12.73□□□□□ -0.37
LINC00963-218ENST00000624138 SOCS7O14512 581 aa12.73□□□□□ -0.37
LINC00963-218ENST00000624138 ILDR2Q71H61 639 aa12.72□□□□□ -0.37
LINC00963-218ENST00000624138 ARHGEF40Q8TER5 1519 aa12.71□□□□□ -0.38
LINC00963-218ENST00000624138 ARID4BQ4LE39 1312 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-218ENST00000624138 HSPA2P54652 639 aa12.7□□□□□ -0.38
LINC00963-218ENST00000624138 SIGLEC1Q9BZZ2 1709 aa12.7□□□□□ -0.38
LINC00963-218ENST00000624138 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
LINC00963-218ENST00000624138 SETD1BQ9UPS6 1966 aaKnown RBP12.68□□□□□ -0.38
LINC00963-218ENST00000624138 DISP3Q9P2K9 1392 aa12.68□□□□□ -0.38
LINC00963-218ENST00000624138 STRCQ7RTU9 1775 aa12.66□□□□□ -0.38
LINC00963-218ENST00000624138 PREX1Q8TCU6 1659 aa12.66□□□□□ -0.38
LINC00963-218ENST00000624138 RAPGEF6Q8TEU7 1601 aa12.65□□□□□ -0.38
LINC00963-218ENST00000624138 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
LINC00963-218ENST00000624138 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
LINC00963-218ENST00000624138 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
LINC00963-218ENST00000624138 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
LINC00963-218ENST00000624138 POGZQ7Z3K3 1410 aa12.63□□□□□ -0.39
LINC00963-218ENST00000624138 ZMYM4Q5VZL5 1548 aa12.63□□□□□ -0.39
LINC00963-218ENST00000624138 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
LINC00963-218ENST00000624138 FANCAO15360 1455 aa12.63□□□□□ -0.39
LINC00963-218ENST00000624138 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-218ENST00000624138 SAMD9Q5K651 1589 aa12.61□□□□□ -0.39
LINC00963-218ENST00000624138 SPATA31D1Q6ZQQ2 1576 aa12.61□□□□□ -0.39
LINC00963-218ENST00000624138 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
LINC00963-218ENST00000624138 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
LINC00963-218ENST00000624138 EFCAB5A4FU69 1503 aa12.6□□□□□ -0.39
LINC00963-218ENST00000624138 ZFYVE16Q7Z3T8 1539 aa12.59□□□□□ -0.39
LINC00963-218ENST00000624138 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
LINC00963-218ENST00000624138 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
LINC00963-218ENST00000624138 P3H3Q8IVL6 736 aa12.58□□□□□ -0.4
LINC00963-218ENST00000624138 YEATS2Q9ULM3 1422 aa12.57□□□□□ -0.4
LINC00963-218ENST00000624138 HECW1Q76N89 1606 aa12.57□□□□□ -0.4
LINC00963-218ENST00000624138 ARHGEF12Q9NZN5 1544 aa12.57□□□□□ -0.4
LINC00963-218ENST00000624138 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms