RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
LINC00963-216ENST00000623185 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
LINC00963-216ENST00000623185 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
LINC00963-216ENST00000623185 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
LINC00963-216ENST00000623185 LOC105371045A0A1W2PR82 267 aa20.24■□□□□ 0.83
LINC00963-216ENST00000623185 TNIKQ9UKE5 1360 aa20.2■□□□□ 0.82
LINC00963-216ENST00000623185 IQGAP2Q13576 1575 aa20.18■□□□□ 0.82
LINC00963-216ENST00000623185 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
LINC00963-216ENST00000623185 SHROOM2Q13796 1616 aa20.14■□□□□ 0.81
LINC00963-216ENST00000623185 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.81
LINC00963-216ENST00000623185 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
LINC00963-216ENST00000623185 CTTNBP2Q8WZ74 1663 aa20.1■□□□□ 0.81
LINC00963-216ENST00000623185 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
LINC00963-216ENST00000623185 ARHGEF11O15085 1522 aa20.08■□□□□ 0.81
LINC00963-216ENST00000623185 DISP1Q96F81 1524 aa20.07■□□□□ 0.8
LINC00963-216ENST00000623185 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
LINC00963-216ENST00000623185 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
LINC00963-216ENST00000623185 PTPRGP23470 1445 aa20.02■□□□□ 0.8
LINC00963-216ENST00000623185 ERCC6L2Q5T890 1561 aa20.02■□□□□ 0.8
LINC00963-216ENST00000623185 RIMBP3CA6NJZ7 1639 aa20■□□□□ 0.79
LINC00963-216ENST00000623185 RIMBP3BA6NNM3 1639 aa20■□□□□ 0.79
LINC00963-216ENST00000623185 RIMBP3Q9UFD9 1639 aa20■□□□□ 0.79
LINC00963-216ENST00000623185 CLIP1P30622 1438 aa19.97■□□□□ 0.79
LINC00963-216ENST00000623185 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
LINC00963-216ENST00000623185 KIAA0556O60303 1618 aa19.96■□□□□ 0.79
LINC00963-216ENST00000623185 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
LINC00963-216ENST00000623185 ARAP1Q96P48 1450 aa19.95■□□□□ 0.78
LINC00963-216ENST00000623185 ARHGAP35Q9NRY4 1499 aa19.95■□□□□ 0.78
LINC00963-216ENST00000623185 CEP162Q5TB80 1403 aa19.94■□□□□ 0.78
LINC00963-216ENST00000623185 TTBK1Q5TCY1 1321 aaPredicted RBP19.94■□□□□ 0.78
LINC00963-216ENST00000623185 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
LINC00963-216ENST00000623185 UACAQ9BZF9 1416 aa19.87■□□□□ 0.77
LINC00963-216ENST00000623185 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
LINC00963-216ENST00000623185 NPM1P06748 294 aaKnown RBP eCLIP19.83■□□□□ 0.77
LINC00963-216ENST00000623185 UHRF1BP1LA0JNW5 1464 aa19.82■□□□□ 0.76
LINC00963-216ENST00000623185 PLB1Q6P1J6 1458 aa19.8■□□□□ 0.76
LINC00963-216ENST00000623185 ABCA8O94911 1581 aa19.77■□□□□ 0.76
LINC00963-216ENST00000623185 ABCC2Q92887 1545 aa19.75■□□□□ 0.75
LINC00963-216ENST00000623185 ATP1B4Q9UN42 357 aaPredicted RBP19.74■□□□□ 0.75
LINC00963-216ENST00000623185 CASKIN1Q8WXD9 1431 aa19.73■□□□□ 0.75
LINC00963-216ENST00000623185 KDM5BQ9UGL1 1544 aa19.71■□□□□ 0.75
LINC00963-216ENST00000623185 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
LINC00963-216ENST00000623185 ADCY10Q96PN6 1610 aa19.7■□□□□ 0.74
LINC00963-216ENST00000623185 RAPGEF6Q8TEU7 1601 aa19.69■□□□□ 0.74
LINC00963-216ENST00000623185 ATP10BO94823 1461 aa19.69■□□□□ 0.74
LINC00963-216ENST00000623185 NUP153P49790 1475 aaKnown RBP19.68■□□□□ 0.74
LINC00963-216ENST00000623185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.67■□□□□ 0.74
LINC00963-216ENST00000623185 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
LINC00963-216ENST00000623185 CDK11AQ9UQ88 783 aaPredicted RBP19.66■□□□□ 0.74
LINC00963-216ENST00000623185 PLEKHD1A6NEE1 506 aa19.65■□□□□ 0.74
LINC00963-216ENST00000623185 ARID3CA6NKF2 412 aa19.65■□□□□ 0.74
LINC00963-216ENST00000623185 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
LINC00963-216ENST00000623185 EPRSP07814 1512 aaKnown RBP19.61■□□□□ 0.73
LINC00963-216ENST00000623185 HECW1Q76N89 1606 aa19.6■□□□□ 0.73
LINC00963-216ENST00000623185 APLP2Q06481 763 aa19.59■□□□□ 0.73
LINC00963-216ENST00000623185 ASXL2Q76L83 1435 aa19.58■□□□□ 0.72
LINC00963-216ENST00000623185 MAPKBP1O60336 1514 aa19.57■□□□□ 0.72
LINC00963-216ENST00000623185 CCDC18Q5T9S5 1454 aa19.57■□□□□ 0.72
LINC00963-216ENST00000623185 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
LINC00963-216ENST00000623185 ZCCHC11Q5TAX3 1644 aaKnown RBP19.55■□□□□ 0.72
LINC00963-216ENST00000623185 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
LINC00963-216ENST00000623185 CDK13Q14004 1512 aaKnown RBP19.52■□□□□ 0.72
LINC00963-216ENST00000623185 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
LINC00963-216ENST00000623185 WDR7Q9Y4E6 1490 aa19.51■□□□□ 0.71
LINC00963-216ENST00000623185 FAM69CQ0P6D2 419 aa19.5■□□□□ 0.71
LINC00963-216ENST00000623185 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
LINC00963-216ENST00000623185 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
LINC00963-216ENST00000623185 TROQ12816 1431 aaPredicted RBP19.47■□□□□ 0.71
LINC00963-216ENST00000623185 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
LINC00963-216ENST00000623185 MTUS2Q5JR59 1369 aa19.45■□□□□ 0.7
LINC00963-216ENST00000623185 LRRIQ1Q96JM4 1722 aa19.43■□□□□ 0.7
LINC00963-216ENST00000623185 TIAM1Q13009 1591 aa19.41■□□□□ 0.7
LINC00963-216ENST00000623185 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
LINC00963-216ENST00000623185 GLI2P10070 1586 aa19.4■□□□□ 0.7
LINC00963-216ENST00000623185 MAGI3Q5TCQ9 1506 aa19.39■□□□□ 0.69
LINC00963-216ENST00000623185 DIP2BQ9P265 1576 aa19.36■□□□□ 0.69
LINC00963-216ENST00000623185 CD109Q6YHK3 1445 aa19.35■□□□□ 0.69
LINC00963-216ENST00000623185 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.68
LINC00963-216ENST00000623185 CFAP43Q8NDM7 1665 aa19.33■□□□□ 0.68
LINC00963-216ENST00000623185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.32■□□□□ 0.682e-6■■■□□ 16.6
LINC00963-216ENST00000623185 PLCH2O75038 1416 aa19.31■□□□□ 0.68
LINC00963-216ENST00000623185 ABCA9Q8IUA7 1624 aa19.3■□□□□ 0.68
LINC00963-216ENST00000623185 EFCAB2Q5VUJ9 269 aa19.29■□□□□ 0.68
LINC00963-216ENST00000623185 CCNB3Q8WWL7 1395 aa19.29■□□□□ 0.68
LINC00963-216ENST00000623185 KIF14Q15058 1648 aa19.29■□□□□ 0.68
LINC00963-216ENST00000623185 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.68
LINC00963-216ENST00000623185 NCOA2Q15596 1464 aa19.27■□□□□ 0.67
LINC00963-216ENST00000623185 KIF13AQ9H1H9 1805 aa19.26■□□□□ 0.67
LINC00963-216ENST00000623185 CFDP1Q9UEE9 299 aaPredicted RBP19.26■□□□□ 0.67
LINC00963-216ENST00000623185 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
LINC00963-216ENST00000623185 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
LINC00963-216ENST00000623185 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
LINC00963-216ENST00000623185 SUPT6HQ7KZ85 1726 aaKnown RBP19.22■□□□□ 0.67
LINC00963-216ENST00000623185 TEX14Q8IWB6 1497 aa19.22■□□□□ 0.67
LINC00963-216ENST00000623185 ARAP3Q8WWN8 1544 aa19.22■□□□□ 0.67
LINC00963-216ENST00000623185 TTC37Q6PGP7 1564 aa19.21■□□□□ 0.67
LINC00963-216ENST00000623185 MIA2Q96PC5 1412 aa19.18■□□□□ 0.66
LINC00963-216ENST00000623185 FANCAO15360 1455 aa19.18■□□□□ 0.66
LINC00963-216ENST00000623185 NEO1Q92859 1461 aa19.18■□□□□ 0.66
LINC00963-216ENST00000623185 MYOM3Q5VTT5 1437 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms