RNA–Protein interactions for RNA: ENST00000622978.1

PCDHB12-202, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-202ENST00000622978 EFCAB5A4FU69 1503 aa30.87■■■□□ 2.53
PCDHB12-202ENST00000622978 GRIN2BQ13224 1484 aa30.85■■■□□ 2.53
PCDHB12-202ENST00000622978 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
PCDHB12-202ENST00000622978 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
PCDHB12-202ENST00000622978 ZNF608Q9ULD9 1512 aaPredicted RBP30.81■■■□□ 2.52
PCDHB12-202ENST00000622978 EIF4G3O43432 1585 aaKnown RBP30.74■■■□□ 2.51
PCDHB12-202ENST00000622978 FHOD3Q2V2M9 1422 aa30.71■■■□□ 2.51
PCDHB12-202ENST00000622978 ZEB1P37275 1124 aaPredicted RBP30.7■■■□□ 2.51
PCDHB12-202ENST00000622978 MAP3K1Q13233 1512 aa30.7■■■□□ 2.5
PCDHB12-202ENST00000622978 SAMD9Q5K651 1589 aa30.68■■■□□ 2.5
PCDHB12-202ENST00000622978 KANK4Q5T7N3 995 aaPredicted RBP30.68■■■□□ 2.5
PCDHB12-202ENST00000622978 PCF11O94913 1555 aaKnown RBP30.68■■■□□ 2.5
PCDHB12-202ENST00000622978 P3H3Q8IVL6 736 aa30.67■■■□□ 2.5
PCDHB12-202ENST00000622978 TIAM1Q13009 1591 aa30.66■■■□□ 2.5
PCDHB12-202ENST00000622978 SNAPC4Q5SXM2 1469 aa30.62■■■□□ 2.49
PCDHB12-202ENST00000622978 FYCO1Q9BQS8 1478 aa30.6■■■□□ 2.49
PCDHB12-202ENST00000622978 FMN1Q68DA7 1419 aa30.59■■■□□ 2.49
PCDHB12-202ENST00000622978 IQGAP2Q13576 1575 aa30.59■■■□□ 2.49
PCDHB12-202ENST00000622978 CFAP43Q8NDM7 1665 aa30.58■■■□□ 2.49
PCDHB12-202ENST00000622978 CASKIN1Q8WXD9 1431 aa30.56■■■□□ 2.48
PCDHB12-202ENST00000622978 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
PCDHB12-202ENST00000622978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.51■■■□□ 2.48
PCDHB12-202ENST00000622978 LRRC9Q6ZRR7 1453 aa30.5■■■□□ 2.47
PCDHB12-202ENST00000622978 GRIN2AQ12879 1464 aa30.49■■■□□ 2.47
PCDHB12-202ENST00000622978 RRBP1Q9P2E9 1410 aaKnown RBP30.47■■■□□ 2.47
PCDHB12-202ENST00000622978 CCER1Q8TC90 406 aaPredicted RBP30.46■■■□□ 2.47
PCDHB12-202ENST00000622978 HNRNPUL2Q1KMD3 747 aaKnown RBP30.45■■■□□ 2.47
PCDHB12-202ENST00000622978 ATP1B4Q9UN42 357 aaPredicted RBP30.43■■■□□ 2.46
PCDHB12-202ENST00000622978 SYNJ2O15056 1496 aa30.42■■■□□ 2.46
PCDHB12-202ENST00000622978 KIAA0586Q9BVV6 1533 aa30.42■■■□□ 2.46
PCDHB12-202ENST00000622978 UGGT2Q9NYU1 1516 aa30.41■■■□□ 2.46
PCDHB12-202ENST00000622978 CCNB3Q8WWL7 1395 aa30.35■■■□□ 2.45
PCDHB12-202ENST00000622978 CHMP7Q8WUX9 453 aaPredicted RBP30.32■■■□□ 2.44
PCDHB12-202ENST00000622978 LRRIQ1Q96JM4 1722 aa30.3■■■□□ 2.44
PCDHB12-202ENST00000622978 CEP170Q5SW79 1584 aa30.29■■■□□ 2.44
PCDHB12-202ENST00000622978 KIAA0556O60303 1618 aa30.27■■■□□ 2.44
PCDHB12-202ENST00000622978 PHLDB1Q86UU1 1377 aa30.25■■■□□ 2.43
PCDHB12-202ENST00000622978 HECW1Q76N89 1606 aa30.25■■■□□ 2.43
PCDHB12-202ENST00000622978 DISP1Q96F81 1524 aa30.23■■■□□ 2.43
PCDHB12-202ENST00000622978 NUP160Q12769 1436 aa30.23■■■□□ 2.43
PCDHB12-202ENST00000622978 CCDC18Q5T9S5 1454 aa30.22■■■□□ 2.43
PCDHB12-202ENST00000622978 FBLN2P98095 1184 aa30.21■■■□□ 2.43
PCDHB12-202ENST00000622978 MTUS2Q5JR59 1369 aa30.19■■■□□ 2.42
PCDHB12-202ENST00000622978 EHBP1L1Q8N3D4 1523 aa30.15■■■□□ 2.42
PCDHB12-202ENST00000622978 EPRSP07814 1512 aaKnown RBP30.1■■■□□ 2.41
PCDHB12-202ENST00000622978 SUPT6HQ7KZ85 1726 aaKnown RBP30.08■■■□□ 2.41
PCDHB12-202ENST00000622978 NCOA2Q15596 1464 aa30.04■■■□□ 2.4
PCDHB12-202ENST00000622978 MAGI3Q5TCQ9 1506 aa30.03■■■□□ 2.4
PCDHB12-202ENST00000622978 CARMIL2Q6F5E8 1435 aa30.03■■■□□ 2.4
PCDHB12-202ENST00000622978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.03■■■□□ 2.4
PCDHB12-202ENST00000622978 RAPGEF6Q8TEU7 1601 aa30.03■■■□□ 2.4
PCDHB12-202ENST00000622978 CDK13Q14004 1512 aaKnown RBP30.02■■■□□ 2.4
PCDHB12-202ENST00000622978 ITGAEP38570 1179 aa30.02■■■□□ 2.4
PCDHB12-202ENST00000622978 FGD6Q6ZV73 1430 aa30.01■■■□□ 2.4
PCDHB12-202ENST00000622978 FAM50AQ14320 339 aaKnown RBP30.01■■■□□ 2.39
PCDHB12-202ENST00000622978 JPH4Q96JJ6 628 aa30■■■□□ 2.39
PCDHB12-202ENST00000622978 CHD1O14646 1710 aa29.99■■■□□ 2.39
PCDHB12-202ENST00000622978 ARHGEF11O15085 1522 aa29.97■■■□□ 2.39
PCDHB12-202ENST00000622978 MYOM3Q5VTT5 1437 aa29.96■■■□□ 2.39
PCDHB12-202ENST00000622978 NUP153P49790 1475 aaKnown RBP29.96■■■□□ 2.39
PCDHB12-202ENST00000622978 DHX57Q6P158 1386 aaKnown RBP29.9■■■□□ 2.38
PCDHB12-202ENST00000622978 CLSPNQ9HAW4 1339 aa29.87■■■□□ 2.37
PCDHB12-202ENST00000622978 ARID3CA6NKF2 412 aa29.86■■■□□ 2.37
PCDHB12-202ENST00000622978 PLB1Q6P1J6 1458 aa29.86■■■□□ 2.37
PCDHB12-202ENST00000622978 RAB3GAP2Q9H2M9 1393 aa29.84■■■□□ 2.37
PCDHB12-202ENST00000622978 SETD5Q9C0A6 1442 aa29.84■■■□□ 2.37
PCDHB12-202ENST00000622978 PTPN23Q9H3S7 1636 aa29.82■■■□□ 2.36
PCDHB12-202ENST00000622978 PRG4Q92954 1404 aaPredicted RBP29.8■■■□□ 2.36
PCDHB12-202ENST00000622978 CDK11AQ9UQ88 783 aaPredicted RBP29.78■■■□□ 2.36
PCDHB12-202ENST00000622978 ABCA8O94911 1581 aa29.78■■■□□ 2.36
PCDHB12-202ENST00000622978 SHROOM2Q13796 1616 aa29.77■■■□□ 2.36
PCDHB12-202ENST00000622978 TCOF1Q13428 1488 aaKnown RBP29.76■■■□□ 2.35
PCDHB12-202ENST00000622978 MIA2Q96PC5 1412 aa29.74■■■□□ 2.35
PCDHB12-202ENST00000622978 TROQ12816 1431 aaPredicted RBP29.7■■■□□ 2.35
PCDHB12-202ENST00000622978 PTPRKQ15262 1439 aa29.67■■■□□ 2.34
PCDHB12-202ENST00000622978 PTPRGP23470 1445 aa29.66■■■□□ 2.34
PCDHB12-202ENST00000622978 ADCY10Q96PN6 1610 aa29.65■■■□□ 2.34
PCDHB12-202ENST00000622978 HFM1A2PYH4 1435 aa29.63■■■□□ 2.33
PCDHB12-202ENST00000622978 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
PCDHB12-202ENST00000622978 ATP10BO94823 1461 aa29.58■■■□□ 2.33
PCDHB12-202ENST00000622978 MAPKBP1O60336 1514 aa29.58■■■□□ 2.33
PCDHB12-202ENST00000622978 ITSN2Q9NZM3 1697 aa29.57■■■□□ 2.32
PCDHB12-202ENST00000622978 KIF14Q15058 1648 aa29.56■■■□□ 2.32
PCDHB12-202ENST00000622978 NAIPQ13075 1403 aa29.53■■■□□ 2.32
PCDHB12-202ENST00000622978 ERCC6L2Q5T890 1561 aa29.52■■■□□ 2.32
PCDHB12-202ENST00000622978 UACAQ9BZF9 1416 aa29.51■■■□□ 2.31
PCDHB12-202ENST00000622978 PLEKHD1A6NEE1 506 aa29.51■■■□□ 2.31
PCDHB12-202ENST00000622978 AKNAQ7Z591 1439 aa29.5■■■□□ 2.31
PCDHB12-202ENST00000622978 GCC2Q8IWJ2 1684 aa29.49■■■□□ 2.31
PCDHB12-202ENST00000622978 DNMT1P26358 1616 aaKnown RBP29.47■■■□□ 2.31
PCDHB12-202ENST00000622978 GPATCH8Q9UKJ3 1502 aaKnown RBP29.47■■■□□ 2.31
PCDHB12-202ENST00000622978 DAPK1P53355 1430 aa29.45■■■□□ 2.3
PCDHB12-202ENST00000622978 ABCC2Q92887 1545 aa29.42■■■□□ 2.3
PCDHB12-202ENST00000622978 CAMSAP2Q08AD1 1489 aa29.42■■■□□ 2.3
PCDHB12-202ENST00000622978 ABCC10Q5T3U5 1492 aa29.41■■■□□ 2.3
PCDHB12-202ENST00000622978 CFDP1Q9UEE9 299 aaPredicted RBP29.41■■■□□ 2.3
PCDHB12-202ENST00000622978 CHIC2Q9UKJ5 165 aa29.41■■■□□ 2.3
PCDHB12-202ENST00000622978 ZNF316A6NFI3 1004 aaPredicted RBP29.4■■■□□ 2.3
PCDHB12-202ENST00000622978 ZNF644Q9H582 1327 aaPredicted RBP29.39■■■□□ 2.3
PCDHB12-202ENST00000622978 CDC42BPAQ5VT25 1732 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms