RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
ATRX-208ENST00000622960 JPH4Q96JJ6 628 aa22.32■■□□□ 1.16
ATRX-208ENST00000622960 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
ATRX-208ENST00000622960 KIAA0586Q9BVV6 1533 aa22.31■■□□□ 1.16
ATRX-208ENST00000622960 IQGAP2Q13576 1575 aa22.18■■□□□ 1.14
ATRX-208ENST00000622960 RAPGEF2Q9Y4G8 1499 aa22.18■■□□□ 1.14
ATRX-208ENST00000622960 CARMIL2Q6F5E8 1435 aa22.16■■□□□ 1.14
ATRX-208ENST00000622960 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.13
ATRX-208ENST00000622960 PTPRGP23470 1445 aa22.06■■□□□ 1.12
ATRX-208ENST00000622960 ADCY10Q96PN6 1610 aa22.05■■□□□ 1.12
ATRX-208ENST00000622960 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
ATRX-208ENST00000622960 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
ATRX-208ENST00000622960 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
ATRX-208ENST00000622960 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
ATRX-208ENST00000622960 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
ATRX-208ENST00000622960 KIF13AQ9H1H9 1805 aa21.96■■□□□ 1.11
ATRX-208ENST00000622960 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
ATRX-208ENST00000622960 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
ATRX-208ENST00000622960 KIAA0556O60303 1618 aa21.95■■□□□ 1.1
ATRX-208ENST00000622960 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
ATRX-208ENST00000622960 EEA1Q15075 1411 aa21.93■■□□□ 1.1
ATRX-208ENST00000622960 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
ATRX-208ENST00000622960 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
ATRX-208ENST00000622960 DIP2BQ9P265 1576 aa21.9■■□□□ 1.1
ATRX-208ENST00000622960 UACAQ9BZF9 1416 aa21.89■■□□□ 1.1
ATRX-208ENST00000622960 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.09
ATRX-208ENST00000622960 UHRF1BP1LA0JNW5 1464 aa21.89■■□□□ 1.09
ATRX-208ENST00000622960 FAM9AQ8IZU1 332 aaPredicted RBP21.87■■□□□ 1.09
ATRX-208ENST00000622960 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
ATRX-208ENST00000622960 PLB1Q6P1J6 1458 aa21.82■■□□□ 1.08
ATRX-208ENST00000622960 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
ATRX-208ENST00000622960 KDM5BQ9UGL1 1544 aa21.77■■□□□ 1.08
ATRX-208ENST00000622960 ZCCHC11Q5TAX3 1644 aaKnown RBP21.76■■□□□ 1.07
ATRX-208ENST00000622960 TSPOAP1O95153 1857 aa21.73■■□□□ 1.07
ATRX-208ENST00000622960 GLI2P10070 1586 aa21.7■■□□□ 1.06
ATRX-208ENST00000622960 KIF21BO75037 1637 aa21.7■■□□□ 1.06
ATRX-208ENST00000622960 KDM6BO15054 1643 aa21.69■■□□□ 1.06
ATRX-208ENST00000622960 ABCA8O94911 1581 aa21.69■■□□□ 1.06
ATRX-208ENST00000622960 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
ATRX-208ENST00000622960 WDR7Q9Y4E6 1490 aa21.65■■□□□ 1.06
ATRX-208ENST00000622960 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
ATRX-208ENST00000622960 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
ATRX-208ENST00000622960 P3H3Q8IVL6 736 aa21.64■■□□□ 1.05
ATRX-208ENST00000622960 AEBP2Q6ZN18 517 aaPredicted RBP21.62■■□□□ 1.05
ATRX-208ENST00000622960 TEX14Q8IWB6 1497 aa21.61■■□□□ 1.05
ATRX-208ENST00000622960 MAP3K4Q9Y6R4 1608 aa21.6■■□□□ 1.05
ATRX-208ENST00000622960 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
ATRX-208ENST00000622960 EFCAB5A4FU69 1503 aa21.59■■□□□ 1.05
ATRX-208ENST00000622960 RAPGEF6Q8TEU7 1601 aa21.57■■□□□ 1.04
ATRX-208ENST00000622960 PPRC1Q5VV67 1664 aaKnown RBP21.55■■□□□ 1.04
ATRX-208ENST00000622960 UBTFP17480 764 aaKnown RBP21.54■■□□□ 1.04
ATRX-208ENST00000622960 CFAP43Q8NDM7 1665 aa21.53■■□□□ 1.04
ATRX-208ENST00000622960 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.04
ATRX-208ENST00000622960 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
ATRX-208ENST00000622960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
ATRX-208ENST00000622960 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
ATRX-208ENST00000622960 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
ATRX-208ENST00000622960 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
ATRX-208ENST00000622960 ATP10BO94823 1461 aa21.48■■□□□ 1.03
ATRX-208ENST00000622960 CD109Q6YHK3 1445 aa21.47■■□□□ 1.03
ATRX-208ENST00000622960 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
ATRX-208ENST00000622960 NUP153P49790 1475 aaKnown RBP21.42■■□□□ 1.02
ATRX-208ENST00000622960 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
ATRX-208ENST00000622960 ABCA9Q8IUA7 1624 aa21.38■■□□□ 1.01
ATRX-208ENST00000622960 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
ATRX-208ENST00000622960 HECW1Q76N89 1606 aa21.35■■□□□ 1.01
ATRX-208ENST00000622960 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
ATRX-208ENST00000622960 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
ATRX-208ENST00000622960 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
ATRX-208ENST00000622960 PHLDB1Q86UU1 1377 aa21.3■■□□□ 1
ATRX-208ENST00000622960 NEO1Q92859 1461 aa21.26■□□□□ 0.99
ATRX-208ENST00000622960 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
ATRX-208ENST00000622960 ARAP3Q8WWN8 1544 aa21.25■□□□□ 0.99
ATRX-208ENST00000622960 CFAP74Q9C0B2 1584 aa21.25■□□□□ 0.99
ATRX-208ENST00000622960 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
ATRX-208ENST00000622960 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
ATRX-208ENST00000622960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.98
ATRX-208ENST00000622960 KDM4FA0A1W2PPD8 638 aa21.18■□□□□ 0.98
ATRX-208ENST00000622960 CLIP1P30622 1438 aa21.18■□□□□ 0.98
ATRX-208ENST00000622960 TTC37Q6PGP7 1564 aa21.18■□□□□ 0.98
ATRX-208ENST00000622960 FANCAO15360 1455 aa21.17■□□□□ 0.98
ATRX-208ENST00000622960 KIF14Q15058 1648 aa21.16■□□□□ 0.98
ATRX-208ENST00000622960 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
ATRX-208ENST00000622960 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
ATRX-208ENST00000622960 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
ATRX-208ENST00000622960 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
ATRX-208ENST00000622960 DENND4BO75064 1496 aaPredicted RBP21.11■□□□□ 0.97
ATRX-208ENST00000622960 AKNAQ7Z591 1439 aa21.11■□□□□ 0.97
ATRX-208ENST00000622960 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
ATRX-208ENST00000622960 TROQ12816 1431 aaPredicted RBP21.1■□□□□ 0.97
ATRX-208ENST00000622960 RAPGEF3O95398 923 aa21.09■□□□□ 0.97
ATRX-208ENST00000622960 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
ATRX-208ENST00000622960 FRMPD1Q5SYB0 1578 aa21.07■□□□□ 0.96
ATRX-208ENST00000622960 PLCH2O75038 1416 aa21.07■□□□□ 0.96
ATRX-208ENST00000622960 RICTORQ6R327 1708 aa21.05■□□□□ 0.96
ATRX-208ENST00000622960 ARHGAP5Q13017 1502 aa21.03■□□□□ 0.96
ATRX-208ENST00000622960 ARHGEF40Q8TER5 1519 aa21.03■□□□□ 0.96
ATRX-208ENST00000622960 EFCAB2Q5VUJ9 269 aa21.02■□□□□ 0.96
ATRX-208ENST00000622960 ZMYM4Q5VZL5 1548 aa21■□□□□ 0.95
ATRX-208ENST00000622960 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms