RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ADCY10Q96PN6 1610 aa19.53■□□□□ 0.72
LINC00963-214ENST00000622680 TSPOAP1O95153 1857 aa19.52■□□□□ 0.71
LINC00963-214ENST00000622680 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
LINC00963-214ENST00000622680 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
LINC00963-214ENST00000622680 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
LINC00963-214ENST00000622680 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
LINC00963-214ENST00000622680 KIAA0586Q9BVV6 1533 aa19.4■□□□□ 0.7
LINC00963-214ENST00000622680 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
LINC00963-214ENST00000622680 ABCC10Q5T3U5 1492 aa19.39■□□□□ 0.69
LINC00963-214ENST00000622680 IGF1RP08069 1367 aa19.36■□□□□ 0.69
LINC00963-214ENST00000622680 KDM6BO15054 1643 aa19.33■□□□□ 0.69
LINC00963-214ENST00000622680 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
LINC00963-214ENST00000622680 FAM69CQ0P6D2 419 aa19.3■□□□□ 0.68
LINC00963-214ENST00000622680 PPRC1Q5VV67 1664 aaKnown RBP19.29■□□□□ 0.68
LINC00963-214ENST00000622680 NPM1P06748 294 aaKnown RBP eCLIP19.27■□□□□ 0.68
LINC00963-214ENST00000622680 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
LINC00963-214ENST00000622680 CTTNBP2Q8WZ74 1663 aa19.24■□□□□ 0.67
LINC00963-214ENST00000622680 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
LINC00963-214ENST00000622680 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
LINC00963-214ENST00000622680 PTPRGP23470 1445 aa19.2■□□□□ 0.66
LINC00963-214ENST00000622680 ZCCHC11Q5TAX3 1644 aaKnown RBP19.18■□□□□ 0.66
LINC00963-214ENST00000622680 CARMIL2Q6F5E8 1435 aa19.18■□□□□ 0.66
LINC00963-214ENST00000622680 DISP1Q96F81 1524 aa19.18■□□□□ 0.66
LINC00963-214ENST00000622680 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
LINC00963-214ENST00000622680 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
LINC00963-214ENST00000622680 GLI2P10070 1586 aa19.15■□□□□ 0.66
LINC00963-214ENST00000622680 MAP3K4Q9Y6R4 1608 aa19.14■□□□□ 0.66
LINC00963-214ENST00000622680 ASXL2Q76L83 1435 aa19.14■□□□□ 0.65
LINC00963-214ENST00000622680 UGGT2Q9NYU1 1516 aa19.13■□□□□ 0.65
LINC00963-214ENST00000622680 UHRF1BP1LA0JNW5 1464 aa19.12■□□□□ 0.65
LINC00963-214ENST00000622680 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
LINC00963-214ENST00000622680 PLB1Q6P1J6 1458 aa19.09■□□□□ 0.65
LINC00963-214ENST00000622680 UACAQ9BZF9 1416 aa19.08■□□□□ 0.65
LINC00963-214ENST00000622680 KDM5BQ9UGL1 1544 aa19.06■□□□□ 0.64
LINC00963-214ENST00000622680 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
LINC00963-214ENST00000622680 KDM4FA0A1W2PPD8 638 aa19.03■□□□□ 0.64
LINC00963-214ENST00000622680 CFAP43Q8NDM7 1665 aa18.99■□□□□ 0.63
LINC00963-214ENST00000622680 COL17A1Q9UMD9 1497 aaPredicted RBP18.97■□□□□ 0.63
LINC00963-214ENST00000622680 ABCA8O94911 1581 aa18.96■□□□□ 0.63
LINC00963-214ENST00000622680 ADGRL1O94910 1474 aa18.96■□□□□ 0.63
LINC00963-214ENST00000622680 TEX14Q8IWB6 1497 aa18.95■□□□□ 0.62
LINC00963-214ENST00000622680 WDR7Q9Y4E6 1490 aa18.95■□□□□ 0.62
LINC00963-214ENST00000622680 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
LINC00963-214ENST00000622680 KIF21BO75037 1637 aa18.87■□□□□ 0.61
LINC00963-214ENST00000622680 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
LINC00963-214ENST00000622680 SAMD9Q5K651 1589 aa18.82■□□□□ 0.6
LINC00963-214ENST00000622680 HECW2Q9P2P5 1572 aa18.81■□□□□ 0.6
LINC00963-214ENST00000622680 MAGI3Q5TCQ9 1506 aa18.81■□□□□ 0.6
LINC00963-214ENST00000622680 CD109Q6YHK3 1445 aa18.79■□□□□ 0.6
LINC00963-214ENST00000622680 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
LINC00963-214ENST00000622680 ABCA9Q8IUA7 1624 aa18.78■□□□□ 0.6
LINC00963-214ENST00000622680 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
LINC00963-214ENST00000622680 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
LINC00963-214ENST00000622680 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
LINC00963-214ENST00000622680 ATP10BO94823 1461 aa18.71■□□□□ 0.59
LINC00963-214ENST00000622680 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
LINC00963-214ENST00000622680 FRMPD1Q5SYB0 1578 aa18.67■□□□□ 0.58
LINC00963-214ENST00000622680 ADAMTSL3P82987 1691 aa18.64■□□□□ 0.57
LINC00963-214ENST00000622680 NUP153P49790 1475 aaKnown RBP18.63■□□□□ 0.57
LINC00963-214ENST00000622680 RICTORQ6R327 1708 aa18.63■□□□□ 0.57
LINC00963-214ENST00000622680 BCORL1Q5H9F3 1711 aa18.62■□□□□ 0.57
LINC00963-214ENST00000622680 FHOD3Q2V2M9 1422 aa18.6■□□□□ 0.57
LINC00963-214ENST00000622680 ILDR1Q86SU0 546 aaPredicted RBP18.6■□□□□ 0.57
LINC00963-214ENST00000622680 MADDQ8WXG6 1647 aa18.59■□□□□ 0.57
LINC00963-214ENST00000622680 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
LINC00963-214ENST00000622680 TTC37Q6PGP7 1564 aa18.58■□□□□ 0.56
LINC00963-214ENST00000622680 NEO1Q92859 1461 aa18.57■□□□□ 0.56
LINC00963-214ENST00000622680 CFAP74Q9C0B2 1584 aa18.56■□□□□ 0.56
LINC00963-214ENST00000622680 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
LINC00963-214ENST00000622680 RIMS1Q86UR5 1692 aaKnown RBP18.56■□□□□ 0.56
LINC00963-214ENST00000622680 ARHGEF40Q8TER5 1519 aa18.55■□□□□ 0.56
LINC00963-214ENST00000622680 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
LINC00963-214ENST00000622680 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
LINC00963-214ENST00000622680 EEA1Q15075 1411 aa18.54■□□□□ 0.56
LINC00963-214ENST00000622680 EFCAB5A4FU69 1503 aa18.54■□□□□ 0.56
LINC00963-214ENST00000622680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
LINC00963-214ENST00000622680 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
LINC00963-214ENST00000622680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■■□□ 16.6
LINC00963-214ENST00000622680 RAPGEF3O95398 923 aa18.5■□□□□ 0.55
LINC00963-214ENST00000622680 PHLDB1Q86UU1 1377 aa18.5■□□□□ 0.55
LINC00963-214ENST00000622680 PTPRMP28827 1452 aa18.5■□□□□ 0.55
LINC00963-214ENST00000622680 CDK13Q14004 1512 aaKnown RBP18.49■□□□□ 0.55
LINC00963-214ENST00000622680 LRRIQ1Q96JM4 1722 aa18.49■□□□□ 0.55
LINC00963-214ENST00000622680 MYO5CQ9NQX4 1742 aa18.49■□□□□ 0.55
LINC00963-214ENST00000622680 FER1L4A9Z1Z3 1794 aa18.47■□□□□ 0.55
LINC00963-214ENST00000622680 FANCAO15360 1455 aa18.45■□□□□ 0.54
LINC00963-214ENST00000622680 ZMYM4Q5VZL5 1548 aa18.44■□□□□ 0.54
LINC00963-214ENST00000622680 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
LINC00963-214ENST00000622680 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
LINC00963-214ENST00000622680 DENND4BO75064 1496 aaPredicted RBP18.42■□□□□ 0.54
LINC00963-214ENST00000622680 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
LINC00963-214ENST00000622680 KIF14Q15058 1648 aa18.41■□□□□ 0.54
LINC00963-214ENST00000622680 ZFYVE16Q7Z3T8 1539 aa18.4■□□□□ 0.54
LINC00963-214ENST00000622680 ARID4BQ4LE39 1312 aaPredicted RBP18.38■□□□□ 0.53
LINC00963-214ENST00000622680 PLEKHD1A6NEE1 506 aa18.37■□□□□ 0.53
LINC00963-214ENST00000622680 LMTK3Q96Q04 1460 aa18.37■□□□□ 0.53
LINC00963-214ENST00000622680 YEATS2Q9ULM3 1422 aa18.36■□□□□ 0.53
LINC00963-214ENST00000622680 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
LINC00963-214ENST00000622680 CDC42BPBQ9Y5S2 1711 aa18.34■□□□□ 0.53
LINC00963-214ENST00000622680 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms