RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
TP53-227ENST00000622645 FHOD3Q2V2M9 1422 aa17.69■□□□□ 0.42
TP53-227ENST00000622645 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
TP53-227ENST00000622645 LRRC9Q6ZRR7 1453 aa17.68■□□□□ 0.42
TP53-227ENST00000622645 CLSPNQ9HAW4 1339 aa17.67■□□□□ 0.42
TP53-227ENST00000622645 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
TP53-227ENST00000622645 PCF11O94913 1555 aaKnown RBP17.64■□□□□ 0.41
TP53-227ENST00000622645 CUL7Q14999 1698 aa17.64■□□□□ 0.41
TP53-227ENST00000622645 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
TP53-227ENST00000622645 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
TP53-227ENST00000622645 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
TP53-227ENST00000622645 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
TP53-227ENST00000622645 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
TP53-227ENST00000622645 FAM50AQ14320 339 aaKnown RBP17.59■□□□□ 0.41
TP53-227ENST00000622645 EFCAB5A4FU69 1503 aa17.59■□□□□ 0.41
TP53-227ENST00000622645 RAB3GAP2Q9H2M9 1393 aa17.58■□□□□ 0.4
TP53-227ENST00000622645 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
TP53-227ENST00000622645 MIER1Q8N108 512 aa17.57■□□□□ 0.4
TP53-227ENST00000622645 KIF21AQ7Z4S6 1674 aa17.56■□□□□ 0.4
TP53-227ENST00000622645 CTTNBP2Q8WZ74 1663 aa17.56■□□□□ 0.4
TP53-227ENST00000622645 CASKIN1Q8WXD9 1431 aa17.56■□□□□ 0.4
TP53-227ENST00000622645 CFAP43Q8NDM7 1665 aa17.56■□□□□ 0.4
TP53-227ENST00000622645 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
TP53-227ENST00000622645 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
TP53-227ENST00000622645 AQRO60306 1485 aaKnown RBP eCLIP17.52■□□□□ 0.48e-7■■■□□ 16.1
TP53-227ENST00000622645 FMN1Q68DA7 1419 aa17.52■□□□□ 0.4
TP53-227ENST00000622645 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
TP53-227ENST00000622645 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
TP53-227ENST00000622645 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
TP53-227ENST00000622645 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
TP53-227ENST00000622645 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
TP53-227ENST00000622645 SAMD9Q5K651 1589 aa17.45■□□□□ 0.38
TP53-227ENST00000622645 MTUS2Q5JR59 1369 aa17.44■□□□□ 0.38
TP53-227ENST00000622645 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
TP53-227ENST00000622645 FGD6Q6ZV73 1430 aa17.39■□□□□ 0.37
TP53-227ENST00000622645 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.37
TP53-227ENST00000622645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.39■□□□□ 0.37
TP53-227ENST00000622645 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
TP53-227ENST00000622645 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
TP53-227ENST00000622645 LRRIQ1Q96JM4 1722 aa17.36■□□□□ 0.37
TP53-227ENST00000622645 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
TP53-227ENST00000622645 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
TP53-227ENST00000622645 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
TP53-227ENST00000622645 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
TP53-227ENST00000622645 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
TP53-227ENST00000622645 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
TP53-227ENST00000622645 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
TP53-227ENST00000622645 IQGAP2Q13576 1575 aa17.29■□□□□ 0.36
TP53-227ENST00000622645 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
TP53-227ENST00000622645 MAGI3Q5TCQ9 1506 aa17.28■□□□□ 0.36
TP53-227ENST00000622645 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
TP53-227ENST00000622645 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.35
TP53-227ENST00000622645 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
TP53-227ENST00000622645 SUPT6HQ7KZ85 1726 aaKnown RBP17.25■□□□□ 0.35
TP53-227ENST00000622645 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
TP53-227ENST00000622645 CCDC18Q5T9S5 1454 aa17.24■□□□□ 0.35
TP53-227ENST00000622645 WDR62O43379 1518 aa17.23■□□□□ 0.35
TP53-227ENST00000622645 UGGT2Q9NYU1 1516 aa17.23■□□□□ 0.35
TP53-227ENST00000622645 EPRSP07814 1512 aaKnown RBP17.22■□□□□ 0.35
TP53-227ENST00000622645 NAIPQ13075 1403 aa17.21■□□□□ 0.35
TP53-227ENST00000622645 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
TP53-227ENST00000622645 ARHGEF11O15085 1522 aa17.21■□□□□ 0.35
TP53-227ENST00000622645 HECW1Q76N89 1606 aa17.21■□□□□ 0.35
TP53-227ENST00000622645 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
TP53-227ENST00000622645 PTPN23Q9H3S7 1636 aa17.2■□□□□ 0.34
TP53-227ENST00000622645 CHIC2Q9UKJ5 165 aa17.19■□□□□ 0.34
TP53-227ENST00000622645 PPP1R15AO75807 674 aaPredicted RBP17.19■□□□□ 0.34
TP53-227ENST00000622645 RRP7BPQ9NSQ0 103 aa17.18■□□□□ 0.34
TP53-227ENST00000622645 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
TP53-227ENST00000622645 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
TP53-227ENST00000622645 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
TP53-227ENST00000622645 HIRIP3Q9BW71 556 aaPredicted RBP17.15■□□□□ 0.34
TP53-227ENST00000622645 DISP1Q96F81 1524 aa17.14■□□□□ 0.33
TP53-227ENST00000622645 EIF4G3O43432 1585 aaKnown RBP17.14■□□□□ 0.33
TP53-227ENST00000622645 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
TP53-227ENST00000622645 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
TP53-227ENST00000622645 TCOF1Q13428 1488 aaKnown RBP17.13■□□□□ 0.33
TP53-227ENST00000622645 DDX10Q13206 875 aaKnown RBP17.13■□□□□ 0.33
TP53-227ENST00000622645 KIAA0556O60303 1618 aa17.11■□□□□ 0.33
TP53-227ENST00000622645 FBLN2P98095 1184 aa17.1■□□□□ 0.33
TP53-227ENST00000622645 CHMP7Q8WUX9 453 aaPredicted RBP17.1■□□□□ 0.33
TP53-227ENST00000622645 MIA2Q96PC5 1412 aa17.09■□□□□ 0.33
TP53-227ENST00000622645 KCNH8Q96L42 1107 aa17.09■□□□□ 0.33
TP53-227ENST00000622645 NUP153P49790 1475 aaKnown RBP17.08■□□□□ 0.32
TP53-227ENST00000622645 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
TP53-227ENST00000622645 ZNF644Q9H582 1327 aaPredicted RBP17.04■□□□□ 0.32
TP53-227ENST00000622645 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
TP53-227ENST00000622645 KDM6BO15054 1643 aa17.03■□□□□ 0.32
TP53-227ENST00000622645 CDK11AQ9UQ88 783 aaPredicted RBP17.02■□□□□ 0.32
TP53-227ENST00000622645 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
TP53-227ENST00000622645 RAPGEF6Q8TEU7 1601 aa17.02■□□□□ 0.32
TP53-227ENST00000622645 DENND4BO75064 1496 aaPredicted RBP17.02■□□□□ 0.31
TP53-227ENST00000622645 AKNAQ7Z591 1439 aa17.02■□□□□ 0.31
TP53-227ENST00000622645 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
TP53-227ENST00000622645 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
TP53-227ENST00000622645 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
TP53-227ENST00000622645 PLB1Q6P1J6 1458 aa17■□□□□ 0.31
TP53-227ENST00000622645 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
TP53-227ENST00000622645 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
TP53-227ENST00000622645 DAPK1P53355 1430 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms