RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
LITAF-221ENST00000622633 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
LITAF-221ENST00000622633 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
LITAF-221ENST00000622633 DAXXQ9UER7 740 aaPredicted RBP17.83■□□□□ 0.45
LITAF-221ENST00000622633 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
LITAF-221ENST00000622633 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
LITAF-221ENST00000622633 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
LITAF-221ENST00000622633 P3H3Q8IVL6 736 aa17.77■□□□□ 0.43
LITAF-221ENST00000622633 MSH5O43196 834 aa17.75■□□□□ 0.43
LITAF-221ENST00000622633 RBM19Q9Y4C8 960 aaKnown RBP17.74■□□□□ 0.43
LITAF-221ENST00000622633 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
LITAF-221ENST00000622633 TIAM1Q13009 1591 aa17.74■□□□□ 0.43
LITAF-221ENST00000622633 ATP1B4Q9UN42 357 aaPredicted RBP17.73■□□□□ 0.43
LITAF-221ENST00000622633 MAP3K1Q13233 1512 aa17.71■□□□□ 0.43
LITAF-221ENST00000622633 PLEKHG5O94827 1062 aa17.71■□□□□ 0.42
LITAF-221ENST00000622633 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.42
LITAF-221ENST00000622633 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.42
LITAF-221ENST00000622633 ERICH6BQ5W0A0 696 aa17.7■□□□□ 0.42
LITAF-221ENST00000622633 FAM50AQ14320 339 aaKnown RBP17.7■□□□□ 0.42
LITAF-221ENST00000622633 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
LITAF-221ENST00000622633 DEKP35659 375 aaKnown RBP17.69■□□□□ 0.42
LITAF-221ENST00000622633 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
LITAF-221ENST00000622633 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
LITAF-221ENST00000622633 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
LITAF-221ENST00000622633 SETD5Q9C0A6 1442 aa17.66■□□□□ 0.42
LITAF-221ENST00000622633 MYT1LQ9UL68 1186 aa17.65■□□□□ 0.42
LITAF-221ENST00000622633 MAPKBP1O60336 1514 aa17.64■□□□□ 0.41
LITAF-221ENST00000622633 FHOD3Q2V2M9 1422 aa17.63■□□□□ 0.41
LITAF-221ENST00000622633 PKNOX2Q96KN3 472 aa17.62■□□□□ 0.41
LITAF-221ENST00000622633 SIN3AQ96ST3 1273 aa17.61■□□□□ 0.41
LITAF-221ENST00000622633 PCF11O94913 1555 aaKnown RBP17.61■□□□□ 0.41
LITAF-221ENST00000622633 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
LITAF-221ENST00000622633 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
LITAF-221ENST00000622633 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
LITAF-221ENST00000622633 TOPBP1Q92547 1522 aa17.59■□□□□ 0.41
LITAF-221ENST00000622633 NESP48681 1621 aa17.59■□□□□ 0.41
LITAF-221ENST00000622633 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
LITAF-221ENST00000622633 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.54■□□□□ 0.4
LITAF-221ENST00000622633 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
LITAF-221ENST00000622633 FYCO1Q9BQS8 1478 aa17.52■□□□□ 0.4
LITAF-221ENST00000622633 KCNH8Q96L42 1107 aa17.52■□□□□ 0.39
LITAF-221ENST00000622633 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
LITAF-221ENST00000622633 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
LITAF-221ENST00000622633 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.392e-8■■■□□ 18.1
LITAF-221ENST00000622633 PODXL2Q9NZ53 605 aa17.47■□□□□ 0.39
LITAF-221ENST00000622633 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
LITAF-221ENST00000622633 DDX10Q13206 875 aaKnown RBP17.47■□□□□ 0.39
LITAF-221ENST00000622633 CUL7Q14999 1698 aa17.46■□□□□ 0.39
LITAF-221ENST00000622633 BCANQ96GW7 911 aa17.45■□□□□ 0.38
LITAF-221ENST00000622633 URB2Q14146 1524 aaKnown RBP17.45■□□□□ 0.38
LITAF-221ENST00000622633 FMN1Q68DA7 1419 aa17.45■□□□□ 0.38
LITAF-221ENST00000622633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.45■□□□□ 0.38
LITAF-221ENST00000622633 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
LITAF-221ENST00000622633 HIRIP3Q9BW71 556 aaPredicted RBP17.43■□□□□ 0.38
LITAF-221ENST00000622633 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
LITAF-221ENST00000622633 FGD6Q6ZV73 1430 aa17.42■□□□□ 0.38
LITAF-221ENST00000622633 PPP1R15AO75807 674 aaPredicted RBP17.42■□□□□ 0.38
LITAF-221ENST00000622633 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
LITAF-221ENST00000622633 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
LITAF-221ENST00000622633 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
LITAF-221ENST00000622633 PTPRKQ15262 1439 aa17.38■□□□□ 0.37
LITAF-221ENST00000622633 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
LITAF-221ENST00000622633 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
LITAF-221ENST00000622633 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
LITAF-221ENST00000622633 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
LITAF-221ENST00000622633 CCDC18Q5T9S5 1454 aa17.33■□□□□ 0.36
LITAF-221ENST00000622633 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.36
LITAF-221ENST00000622633 NCOA2Q15596 1464 aa17.32■□□□□ 0.36
LITAF-221ENST00000622633 SAMD9Q5K651 1589 aa17.32■□□□□ 0.36
LITAF-221ENST00000622633 TONSLQ96HA7 1378 aa17.32■□□□□ 0.36
LITAF-221ENST00000622633 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
LITAF-221ENST00000622633 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
LITAF-221ENST00000622633 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
LITAF-221ENST00000622633 RTN4Q9NQC3 1192 aaKnown RBP17.3■□□□□ 0.36
LITAF-221ENST00000622633 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
LITAF-221ENST00000622633 FKBP8Q14318 412 aa17.29■□□□□ 0.36
LITAF-221ENST00000622633 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
LITAF-221ENST00000622633 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
LITAF-221ENST00000622633 NAIPQ13075 1403 aa17.28■□□□□ 0.36
LITAF-221ENST00000622633 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.35
LITAF-221ENST00000622633 ANP32CO43423 234 aa17.26■□□□□ 0.35
LITAF-221ENST00000622633 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
LITAF-221ENST00000622633 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
LITAF-221ENST00000622633 SUPT6HQ7KZ85 1726 aaKnown RBP17.22■□□□□ 0.35
LITAF-221ENST00000622633 CCER2I3L3R5 266 aa17.22■□□□□ 0.35
LITAF-221ENST00000622633 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
LITAF-221ENST00000622633 MAGI3Q5TCQ9 1506 aa17.22■□□□□ 0.35
LITAF-221ENST00000622633 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
LITAF-221ENST00000622633 UGGT2Q9NYU1 1516 aa17.2■□□□□ 0.34
LITAF-221ENST00000622633 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
LITAF-221ENST00000622633 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
LITAF-221ENST00000622633 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
LITAF-221ENST00000622633 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
LITAF-221ENST00000622633 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
LITAF-221ENST00000622633 NBR1Q14596 966 aa17.13■□□□□ 0.33
LITAF-221ENST00000622633 TCOF1Q13428 1488 aaKnown RBP17.13■□□□□ 0.33
LITAF-221ENST00000622633 EPRSP07814 1512 aaKnown RBP17.12■□□□□ 0.33
LITAF-221ENST00000622633 KDM5BQ9UGL1 1544 aa17.12■□□□□ 0.33
LITAF-221ENST00000622633 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
LITAF-221ENST00000622633 IQGAP2Q13576 1575 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms