RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 RUSC2Q8N2Y8 1516 aa36.23■■■■□ 3.39
PMPCA-212ENST00000622209 KIAA0586Q9BVV6 1533 aa36.15■■■■□ 3.38
PMPCA-212ENST00000622209 CARMIL1Q5VZK9 1371 aa36.13■■■■□ 3.37
PMPCA-212ENST00000622209 CUL7Q14999 1698 aa36.1■■■■□ 3.37
PMPCA-212ENST00000622209 NPM1P06748 294 aaKnown RBP eCLIP36.07■■■■□ 3.36
PMPCA-212ENST00000622209 TTBK1Q5TCY1 1321 aaPredicted RBP35.97■■■■□ 3.35
PMPCA-212ENST00000622209 FAM69CQ0P6D2 419 aa35.94■■■■□ 3.34
PMPCA-212ENST00000622209 PTPRGP23470 1445 aa35.89■■■■□ 3.34
PMPCA-212ENST00000622209 ADCY10Q96PN6 1610 aa35.87■■■■□ 3.33
PMPCA-212ENST00000622209 AEBP2Q6ZN18 517 aaPredicted RBP35.84■■■■□ 3.33
PMPCA-212ENST00000622209 ABCC10Q5T3U5 1492 aa35.84■■■■□ 3.33
PMPCA-212ENST00000622209 CARMIL2Q6F5E8 1435 aa35.83■■■■□ 3.33
PMPCA-212ENST00000622209 KIF13AQ9H1H9 1805 aa35.81■■■■□ 3.32
PMPCA-212ENST00000622209 MAPKBP1O60336 1514 aa35.8■■■■□ 3.32
PMPCA-212ENST00000622209 TNIKQ9UKE5 1360 aa35.79■■■■□ 3.32
PMPCA-212ENST00000622209 RAPGEF2Q9Y4G8 1499 aa35.75■■■■□ 3.31
PMPCA-212ENST00000622209 IQGAP2Q13576 1575 aa35.75■■■■□ 3.31
PMPCA-212ENST00000622209 DIP2BQ9P265 1576 aa35.68■■■■□ 3.3
PMPCA-212ENST00000622209 DISP1Q96F81 1524 aa35.63■■■■□ 3.29
PMPCA-212ENST00000622209 ABCC2Q92887 1545 aa35.59■■■■□ 3.29
PMPCA-212ENST00000622209 UACAQ9BZF9 1416 aa35.57■■■■□ 3.29
PMPCA-212ENST00000622209 UGGT2Q9NYU1 1516 aa35.54■■■■□ 3.28
PMPCA-212ENST00000622209 UHRF1BP1LA0JNW5 1464 aa35.52■■■■□ 3.28
PMPCA-212ENST00000622209 ASXL2Q76L83 1435 aa35.51■■■■□ 3.28
PMPCA-212ENST00000622209 PLB1Q6P1J6 1458 aa35.46■■■■□ 3.27
PMPCA-212ENST00000622209 KIAA0556O60303 1618 aa35.42■■■■□ 3.26
PMPCA-212ENST00000622209 TSPOAP1O95153 1857 aa35.4■■■■□ 3.26
PMPCA-212ENST00000622209 PRXQ9BXM0 1461 aa35.39■■■■□ 3.26
PMPCA-212ENST00000622209 KDM6BO15054 1643 aa35.36■■■■□ 3.25
PMPCA-212ENST00000622209 CHIC1Q5VXU3 224 aa35.36■■■■□ 3.25
PMPCA-212ENST00000622209 KDM5BQ9UGL1 1544 aa35.36■■■■□ 3.25
PMPCA-212ENST00000622209 GLI2P10070 1586 aa35.3■■■■□ 3.24
PMPCA-212ENST00000622209 GOLGA3Q08378 1498 aa35.29■■■■□ 3.24
PMPCA-212ENST00000622209 EPRSP07814 1512 aaKnown RBP35.27■■■■□ 3.24
PMPCA-212ENST00000622209 CTTNBP2Q8WZ74 1663 aa35.27■■■■□ 3.24
PMPCA-212ENST00000622209 CSRNP3Q8WYN3 585 aa35.26■■■■□ 3.24
PMPCA-212ENST00000622209 ZCCHC11Q5TAX3 1644 aaKnown RBP35.24■■■■□ 3.23
PMPCA-212ENST00000622209 P3H3Q8IVL6 736 aa35.21■■■■□ 3.23
PMPCA-212ENST00000622209 PPRC1Q5VV67 1664 aaKnown RBP35.15■■■■□ 3.22
PMPCA-212ENST00000622209 KDM4FA0A1W2PPD8 638 aa35.15■■■■□ 3.22
PMPCA-212ENST00000622209 EEA1Q15075 1411 aa35.15■■■■□ 3.22
PMPCA-212ENST00000622209 KCNH8Q96L42 1107 aa35.14■■■■□ 3.22
PMPCA-212ENST00000622209 WDR7Q9Y4E6 1490 aa35.14■■■■□ 3.22
PMPCA-212ENST00000622209 ABCA8O94911 1581 aa35.11■■■■□ 3.21
PMPCA-212ENST00000622209 FAM9AQ8IZU1 332 aaPredicted RBP35.1■■■■□ 3.21
PMPCA-212ENST00000622209 ARID3CA6NKF2 412 aa35.09■■■■□ 3.21
PMPCA-212ENST00000622209 COL17A1Q9UMD9 1497 aaPredicted RBP35.08■■■■□ 3.21
PMPCA-212ENST00000622209 MAP3K4Q9Y6R4 1608 aa35.06■■■■□ 3.2
PMPCA-212ENST00000622209 TEX14Q8IWB6 1497 aa35.05■■■■□ 3.2
PMPCA-212ENST00000622209 RANGAP1P46060 587 aaPredicted RBP35.02■■■■□ 3.2
PMPCA-212ENST00000622209 CD109Q6YHK3 1445 aa34.98■■■■□ 3.19
PMPCA-212ENST00000622209 ATP10BO94823 1461 aa34.91■■■■□ 3.18
PMPCA-212ENST00000622209 MAGI3Q5TCQ9 1506 aa34.86■■■■□ 3.17
PMPCA-212ENST00000622209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.85■■■■□ 3.17
PMPCA-212ENST00000622209 HNRNPUL2Q1KMD3 747 aaKnown RBP34.85■■■■□ 3.17
PMPCA-212ENST00000622209 SAMD9Q5K651 1589 aa34.85■■■■□ 3.17
PMPCA-212ENST00000622209 CFAP43Q8NDM7 1665 aa34.79■■■■□ 3.16
PMPCA-212ENST00000622209 ADGRL1O94910 1474 aa34.79■■■■□ 3.16
PMPCA-212ENST00000622209 FHOD3Q2V2M9 1422 aa34.77■■■■□ 3.16
PMPCA-212ENST00000622209 EHMT2Q96KQ7 1210 aa34.76■■■■□ 3.16
PMPCA-212ENST00000622209 RAPGEF6Q8TEU7 1601 aa34.73■■■■□ 3.15
PMPCA-212ENST00000622209 KIF21BO75037 1637 aa34.7■■■■□ 3.15
PMPCA-212ENST00000622209 NUP153P49790 1475 aaKnown RBP34.67■■■■□ 3.14
PMPCA-212ENST00000622209 UBTFP17480 764 aaKnown RBP34.63■■■■□ 3.13
PMPCA-212ENST00000622209 PLEKHD1A6NEE1 506 aa34.6■■■■□ 3.13
PMPCA-212ENST00000622209 ARAP3Q8WWN8 1544 aa34.59■■■■□ 3.13
PMPCA-212ENST00000622209 ABCA9Q8IUA7 1624 aa34.59■■■■□ 3.13
PMPCA-212ENST00000622209 PHLDB1Q86UU1 1377 aa34.55■■■■□ 3.12
PMPCA-212ENST00000622209 RAPGEF3O95398 923 aa34.55■■■■□ 3.12
PMPCA-212ENST00000622209 EFCAB5A4FU69 1503 aa34.54■■■■□ 3.12
PMPCA-212ENST00000622209 NEO1Q92859 1461 aa34.47■■■■□ 3.11
PMPCA-212ENST00000622209 ATP1B4Q9UN42 357 aaPredicted RBP34.46■■■■□ 3.11
PMPCA-212ENST00000622209 CDK13Q14004 1512 aaKnown RBP34.36■■■■□ 3.09
PMPCA-212ENST00000622209 ARHGAP35Q9NRY4 1499 aa34.33■■■■□ 3.09
PMPCA-212ENST00000622209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.32■■■■□ 3.08
PMPCA-212ENST00000622209 AKNAQ7Z591 1439 aa34.31■■■■□ 3.08
PMPCA-212ENST00000622209 FMN1Q68DA7 1419 aa34.3■■■■□ 3.08
PMPCA-212ENST00000622209 ARID4BQ4LE39 1312 aaPredicted RBP34.3■■■■□ 3.08
PMPCA-212ENST00000622209 FANCAO15360 1455 aa34.29■■■■□ 3.08
PMPCA-212ENST00000622209 DENND4BO75064 1496 aaPredicted RBP34.28■■■■□ 3.08
PMPCA-212ENST00000622209 FRMPD1Q5SYB0 1578 aa34.27■■■■□ 3.08
PMPCA-212ENST00000622209 TTC37Q6PGP7 1564 aa34.24■■■■□ 3.07
PMPCA-212ENST00000622209 HECW2Q9P2P5 1572 aa34.24■■■■□ 3.07
PMPCA-212ENST00000622209 CDK11AQ9UQ88 783 aaPredicted RBP34.22■■■■□ 3.07
PMPCA-212ENST00000622209 HECW1Q76N89 1606 aa34.17■■■■□ 3.06
PMPCA-212ENST00000622209 PLCH2O75038 1416 aa34.16■■■■□ 3.06
PMPCA-212ENST00000622209 CFAP74Q9C0B2 1584 aa34.13■■■■□ 3.05
PMPCA-212ENST00000622209 PTPRMP28827 1452 aa34.13■■■■□ 3.05
PMPCA-212ENST00000622209 EFCAB2Q5VUJ9 269 aa34.11■■■■□ 3.05
PMPCA-212ENST00000622209 SCAPERQ9BY12 1400 aa34.11■■■■□ 3.05
PMPCA-212ENST00000622209 ADAMTSL3P82987 1691 aa34.09■■■■□ 3.05
PMPCA-212ENST00000622209 RICTORQ6R327 1708 aa34.09■■■■□ 3.05
PMPCA-212ENST00000622209 ARHGEF40Q8TER5 1519 aa34.07■■■■□ 3.04
PMPCA-212ENST00000622209 YEATS2Q9ULM3 1422 aa34.06■■■■□ 3.04
PMPCA-212ENST00000622209 TROQ12816 1431 aaPredicted RBP34.05■■■■□ 3.04
PMPCA-212ENST00000622209 ILDR1Q86SU0 546 aaPredicted RBP34.04■■■■□ 3.04
PMPCA-212ENST00000622209 BCORL1Q5H9F3 1711 aa34.02■■■■□ 3.04
PMPCA-212ENST00000622209 POGZQ7Z3K3 1410 aa34.01■■■■□ 3.03
PMPCA-212ENST00000622209 ZMYM4Q5VZL5 1548 aa34■■■■□ 3.03
PMPCA-212ENST00000622209 ZFYVE16Q7Z3T8 1539 aa34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms