RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 KANK4Q5T7N3 995 aaPredicted RBP15.09■□□□□ 0.01
VTA1-205ENST00000620996 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0.01
VTA1-205ENST00000620996 FHOD3Q2V2M9 1422 aa15.06■□□□□ 0
VTA1-205ENST00000620996 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
VTA1-205ENST00000620996 ZEB1P37275 1124 aaPredicted RBP15.04■□□□□ -0
VTA1-205ENST00000620996 WDR62O43379 1518 aa15.04■□□□□ -0
VTA1-205ENST00000620996 IFT140Q96RY7 1462 aa15.04■□□□□ -0
VTA1-205ENST00000620996 FBLN2P98095 1184 aa15.03■□□□□ -0
VTA1-205ENST00000620996 GRIN2BQ13224 1484 aa15□□□□□ -0.01
VTA1-205ENST00000620996 PBRM1Q86U86 1689 aa14.99□□□□□ -0.01
VTA1-205ENST00000620996 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
VTA1-205ENST00000620996 ITGAEP38570 1179 aa14.98□□□□□ -0.01
VTA1-205ENST00000620996 CTTNBP2Q8WZ74 1663 aa14.98□□□□□ -0.01
VTA1-205ENST00000620996 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
VTA1-205ENST00000620996 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
VTA1-205ENST00000620996 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
VTA1-205ENST00000620996 EFCAB5A4FU69 1503 aa14.93□□□□□ -0.02
VTA1-205ENST00000620996 ADAMTS12P58397 1594 aa14.93□□□□□ -0.02
VTA1-205ENST00000620996 PCF11O94913 1555 aaKnown RBP14.93□□□□□ -0.02
VTA1-205ENST00000620996 ARID3CA6NKF2 412 aa14.92□□□□□ -0.02
VTA1-205ENST00000620996 EIF4G3O43432 1585 aaKnown RBP14.92□□□□□ -0.02
VTA1-205ENST00000620996 FMN1Q68DA7 1419 aa14.89□□□□□ -0.03
VTA1-205ENST00000620996 TIAM1Q13009 1591 aa14.89□□□□□ -0.03
VTA1-205ENST00000620996 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
VTA1-205ENST00000620996 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
VTA1-205ENST00000620996 CASKIN1Q8WXD9 1431 aa14.85□□□□□ -0.03
VTA1-205ENST00000620996 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
VTA1-205ENST00000620996 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
VTA1-205ENST00000620996 CCNB3Q8WWL7 1395 aa14.84□□□□□ -0.03
VTA1-205ENST00000620996 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
VTA1-205ENST00000620996 GRIN2AQ12879 1464 aa14.83□□□□□ -0.04
VTA1-205ENST00000620996 SAMD9Q5K651 1589 aa14.82□□□□□ -0.04
VTA1-205ENST00000620996 PHLDB1Q86UU1 1377 aa14.8□□□□□ -0.04
VTA1-205ENST00000620996 MAGI1Q96QZ7 1491 aaPredicted RBP14.8□□□□□ -0.04
VTA1-205ENST00000620996 MAP3K1Q13233 1512 aa14.79□□□□□ -0.04
VTA1-205ENST00000620996 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
VTA1-205ENST00000620996 MYT1Q01538 1121 aa14.78□□□□□ -0.04
VTA1-205ENST00000620996 SYNJ2O15056 1496 aa14.78□□□□□ -0.04
VTA1-205ENST00000620996 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
VTA1-205ENST00000620996 KIAA0586Q9BVV6 1533 aa14.77□□□□□ -0.04
VTA1-205ENST00000620996 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
VTA1-205ENST00000620996 UGGT2Q9NYU1 1516 aa14.71□□□□□ -0.05
VTA1-205ENST00000620996 CEP170Q5SW79 1584 aa14.71□□□□□ -0.05
VTA1-205ENST00000620996 CDK13Q14004 1512 aaKnown RBP14.68□□□□□ -0.06
VTA1-205ENST00000620996 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
VTA1-205ENST00000620996 KIAA0556O60303 1618 aa14.68□□□□□ -0.06
VTA1-205ENST00000620996 HECW1Q76N89 1606 aa14.68□□□□□ -0.06
VTA1-205ENST00000620996 CARMIL2Q6F5E8 1435 aa14.66□□□□□ -0.06
VTA1-205ENST00000620996 CCDC18Q5T9S5 1454 aa14.66□□□□□ -0.06
VTA1-205ENST00000620996 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
VTA1-205ENST00000620996 EPRSP07814 1512 aaKnown RBP14.66□□□□□ -0.06
VTA1-205ENST00000620996 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
VTA1-205ENST00000620996 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
VTA1-205ENST00000620996 NUP160Q12769 1436 aa14.64□□□□□ -0.07
VTA1-205ENST00000620996 FGD6Q6ZV73 1430 aa14.63□□□□□ -0.07
VTA1-205ENST00000620996 EHBP1L1Q8N3D4 1523 aa14.63□□□□□ -0.07
VTA1-205ENST00000620996 RAB3GAP2Q9H2M9 1393 aa14.62□□□□□ -0.07
VTA1-205ENST00000620996 CDK11AQ9UQ88 783 aaPredicted RBP14.61□□□□□ -0.07
VTA1-205ENST00000620996 MAGI3Q5TCQ9 1506 aa14.61□□□□□ -0.07
VTA1-205ENST00000620996 DHX57Q6P158 1386 aaKnown RBP14.61□□□□□ -0.07
VTA1-205ENST00000620996 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
VTA1-205ENST00000620996 PLB1Q6P1J6 1458 aa14.61□□□□□ -0.07
VTA1-205ENST00000620996 MYOM3Q5VTT5 1437 aa14.6□□□□□ -0.07
VTA1-205ENST00000620996 SETD5Q9C0A6 1442 aa14.59□□□□□ -0.07
VTA1-205ENST00000620996 CHIC2Q9UKJ5 165 aa14.59□□□□□ -0.07
VTA1-205ENST00000620996 PRG4Q92954 1404 aaPredicted RBP14.58□□□□□ -0.08
VTA1-205ENST00000620996 RAPGEF6Q8TEU7 1601 aa14.58□□□□□ -0.08
VTA1-205ENST00000620996 NUP153P49790 1475 aaKnown RBP14.57□□□□□ -0.08
VTA1-205ENST00000620996 CHD1O14646 1710 aa14.56□□□□□ -0.08
VTA1-205ENST00000620996 ZNF777Q9ULD5 760 aaPredicted RBP14.54□□□□□ -0.08
VTA1-205ENST00000620996 RRP7BPQ9NSQ0 103 aa14.53□□□□□ -0.08
VTA1-205ENST00000620996 PTPRGP23470 1445 aa14.53□□□□□ -0.08
VTA1-205ENST00000620996 NEUROD1Q13562 356 aa14.51□□□□□ -0.09
VTA1-205ENST00000620996 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
VTA1-205ENST00000620996 PTPN23Q9H3S7 1636 aa14.51□□□□□ -0.09
VTA1-205ENST00000620996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.5□□□□□ -0.09
VTA1-205ENST00000620996 PTPRKQ15262 1439 aa14.49□□□□□ -0.09
VTA1-205ENST00000620996 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
VTA1-205ENST00000620996 ZNF644Q9H582 1327 aaPredicted RBP14.48□□□□□ -0.09
VTA1-205ENST00000620996 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
VTA1-205ENST00000620996 ZNF316A6NFI3 1004 aaPredicted RBP14.47□□□□□ -0.09
VTA1-205ENST00000620996 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
VTA1-205ENST00000620996 TROQ12816 1431 aaPredicted RBP14.46□□□□□ -0.09
VTA1-205ENST00000620996 ARHGEF11O15085 1522 aa14.46□□□□□ -0.09
VTA1-205ENST00000620996 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
VTA1-205ENST00000620996 SIN3AQ96ST3 1273 aa14.45□□□□□ -0.1
VTA1-205ENST00000620996 MIA2Q96PC5 1412 aa14.43□□□□□ -0.1
VTA1-205ENST00000620996 ATP10BO94823 1461 aa14.42□□□□□ -0.1
VTA1-205ENST00000620996 ERCC6L2Q5T890 1561 aa14.41□□□□□ -0.1
VTA1-205ENST00000620996 ABCA8O94911 1581 aa14.41□□□□□ -0.1
VTA1-205ENST00000620996 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
VTA1-205ENST00000620996 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
VTA1-205ENST00000620996 KIF14Q15058 1648 aa14.4□□□□□ -0.1
VTA1-205ENST00000620996 NAIPQ13075 1403 aa14.4□□□□□ -0.1
VTA1-205ENST00000620996 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
VTA1-205ENST00000620996 MAPKBP1O60336 1514 aa14.39□□□□□ -0.11
VTA1-205ENST00000620996 UACAQ9BZF9 1416 aa14.39□□□□□ -0.11
VTA1-205ENST00000620996 DAPK1P53355 1430 aa14.36□□□□□ -0.11
VTA1-205ENST00000620996 GPATCH8Q9UKJ3 1502 aaKnown RBP14.35□□□□□ -0.11
VTA1-205ENST00000620996 CAMSAP2Q08AD1 1489 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms