RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 P3H3Q8IVL6 736 aa17.51■□□□□ 0.39
TP53-226ENST00000620739 VPS8Q8N3P4 1428 aa17.5■□□□□ 0.39
TP53-226ENST00000620739 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
TP53-226ENST00000620739 ARAP1Q96P48 1450 aa17.49■□□□□ 0.39
TP53-226ENST00000620739 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
TP53-226ENST00000620739 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
TP53-226ENST00000620739 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.39
TP53-226ENST00000620739 WDR62O43379 1518 aa17.46■□□□□ 0.39
TP53-226ENST00000620739 HRCP23327 699 aa17.43■□□□□ 0.38
TP53-226ENST00000620739 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
TP53-226ENST00000620739 IFT140Q96RY7 1462 aa17.39■□□□□ 0.37
TP53-226ENST00000620739 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
TP53-226ENST00000620739 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
TP53-226ENST00000620739 CUL7Q14999 1698 aa17.38■□□□□ 0.37
TP53-226ENST00000620739 ATP1B4Q9UN42 357 aaPredicted RBP17.34■□□□□ 0.37
TP53-226ENST00000620739 GRIN2BQ13224 1484 aa17.33■□□□□ 0.37
TP53-226ENST00000620739 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
TP53-226ENST00000620739 FBLN2P98095 1184 aa17.31■□□□□ 0.36
TP53-226ENST00000620739 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
TP53-226ENST00000620739 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
TP53-226ENST00000620739 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
TP53-226ENST00000620739 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.36
TP53-226ENST00000620739 DAXXQ9UER7 740 aaPredicted RBP17.27■□□□□ 0.36
TP53-226ENST00000620739 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.35
TP53-226ENST00000620739 ADAMTS12P58397 1594 aa17.24■□□□□ 0.35
TP53-226ENST00000620739 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
TP53-226ENST00000620739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
TP53-226ENST00000620739 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
TP53-226ENST00000620739 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.35
TP53-226ENST00000620739 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
TP53-226ENST00000620739 ADRA2BP18089 450 aa17.15■□□□□ 0.34
TP53-226ENST00000620739 EFCAB5A4FU69 1503 aa17.14■□□□□ 0.33
TP53-226ENST00000620739 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.33
TP53-226ENST00000620739 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
TP53-226ENST00000620739 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
TP53-226ENST00000620739 IQGAP2Q13576 1575 aa17.11■□□□□ 0.33
TP53-226ENST00000620739 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
TP53-226ENST00000620739 SAMD9Q5K651 1589 aa17.1■□□□□ 0.33
TP53-226ENST00000620739 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
TP53-226ENST00000620739 CCER1Q8TC90 406 aaPredicted RBP17.09■□□□□ 0.33
TP53-226ENST00000620739 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
TP53-226ENST00000620739 TIAM1Q13009 1591 aa17.08■□□□□ 0.33
TP53-226ENST00000620739 KIAA0586Q9BVV6 1533 aa17.08■□□□□ 0.32
TP53-226ENST00000620739 ITGAEP38570 1179 aa17.08■□□□□ 0.32
TP53-226ENST00000620739 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
TP53-226ENST00000620739 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
TP53-226ENST00000620739 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
TP53-226ENST00000620739 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
TP53-226ENST00000620739 JPH4Q96JJ6 628 aa17.04■□□□□ 0.32
TP53-226ENST00000620739 PHLDB1Q86UU1 1377 aa17.03■□□□□ 0.32
TP53-226ENST00000620739 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
TP53-226ENST00000620739 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
TP53-226ENST00000620739 UGGT2Q9NYU1 1516 aa17■□□□□ 0.31
TP53-226ENST00000620739 CCNB3Q8WWL7 1395 aa16.99■□□□□ 0.31
TP53-226ENST00000620739 NUP160Q12769 1436 aa16.99■□□□□ 0.31
TP53-226ENST00000620739 RRBP1Q9P2E9 1410 aaKnown RBP16.98■□□□□ 0.31
TP53-226ENST00000620739 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
TP53-226ENST00000620739 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
TP53-226ENST00000620739 LRRIQ1Q96JM4 1722 aa16.94■□□□□ 0.3
TP53-226ENST00000620739 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
TP53-226ENST00000620739 KIAA0556O60303 1618 aa16.93■□□□□ 0.3
TP53-226ENST00000620739 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
TP53-226ENST00000620739 CDK13Q14004 1512 aaKnown RBP16.92■□□□□ 0.3
TP53-226ENST00000620739 MAGI3Q5TCQ9 1506 aa16.9■□□□□ 0.3
TP53-226ENST00000620739 PLB1Q6P1J6 1458 aa16.89■□□□□ 0.29
TP53-226ENST00000620739 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
TP53-226ENST00000620739 EIF5BO60841 1220 aaKnown RBP16.88■□□□□ 0.29
TP53-226ENST00000620739 CARMIL2Q6F5E8 1435 aa16.86■□□□□ 0.29
TP53-226ENST00000620739 PRG4Q92954 1404 aaPredicted RBP16.86■□□□□ 0.29
TP53-226ENST00000620739 NUP153P49790 1475 aaKnown RBP16.85■□□□□ 0.29
TP53-226ENST00000620739 CHD1O14646 1710 aa16.84■□□□□ 0.29
TP53-226ENST00000620739 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
TP53-226ENST00000620739 CENPBP07199 599 aaPredicted RBP16.83■□□□□ 0.28
TP53-226ENST00000620739 HECW1Q76N89 1606 aa16.83■□□□□ 0.28
TP53-226ENST00000620739 CCDC18Q5T9S5 1454 aa16.81■□□□□ 0.28
TP53-226ENST00000620739 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
TP53-226ENST00000620739 RAPGEF6Q8TEU7 1601 aa16.78■□□□□ 0.28
TP53-226ENST00000620739 PTPRGP23470 1445 aa16.77■□□□□ 0.27
TP53-226ENST00000620739 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
TP53-226ENST00000620739 MYOM3Q5VTT5 1437 aa16.76■□□□□ 0.27
TP53-226ENST00000620739 ERCC6L2Q5T890 1561 aa16.76■□□□□ 0.27
TP53-226ENST00000620739 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
TP53-226ENST00000620739 PTPRKQ15262 1439 aa16.74■□□□□ 0.27
TP53-226ENST00000620739 CDK11AQ9UQ88 783 aaPredicted RBP16.73■□□□□ 0.27
TP53-226ENST00000620739 DHX57Q6P158 1386 aaKnown RBP16.73■□□□□ 0.27
TP53-226ENST00000620739 ZNF644Q9H582 1327 aaPredicted RBP16.72■□□□□ 0.27
TP53-226ENST00000620739 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
TP53-226ENST00000620739 CHIC2Q9UKJ5 165 aa16.72■□□□□ 0.27
TP53-226ENST00000620739 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
TP53-226ENST00000620739 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
TP53-226ENST00000620739 ATP10BO94823 1461 aa16.69■□□□□ 0.26
TP53-226ENST00000620739 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
TP53-226ENST00000620739 PLEKHD1A6NEE1 506 aa16.68■□□□□ 0.26
TP53-226ENST00000620739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
TP53-226ENST00000620739 ABCA8O94911 1581 aa16.67■□□□□ 0.26
TP53-226ENST00000620739 ZBTB22O15209 634 aa16.67■□□□□ 0.26
TP53-226ENST00000620739 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
TP53-226ENST00000620739 ZNF777Q9ULD5 760 aaPredicted RBP16.66■□□□□ 0.26
TP53-226ENST00000620739 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
TP53-226ENST00000620739 SHROOM2Q13796 1616 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms