RNA–Protein interactions for RNA: ENST00000620335.4

RAPGEF5-212, Transcript of Rap guanine nucleotide exchange factor 5, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF5, Length 5,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF5-212ENST00000620335 RTL5Q5HYW3 569 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF5-212ENST00000620335 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
RAPGEF5-212ENST00000620335 RRP7BPQ9NSQ0 103 aa12.65□□□□□ -0.38
RAPGEF5-212ENST00000620335 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF5-212ENST00000620335 PDS5BQ9NTI5 1447 aa12.61□□□□□ -0.39
RAPGEF5-212ENST00000620335 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
RAPGEF5-212ENST00000620335 KANK1Q14678 1352 aa12.61□□□□□ -0.39
RAPGEF5-212ENST00000620335 GGT6Q6P531 493 aa12.6□□□□□ -0.39
RAPGEF5-212ENST00000620335 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
RAPGEF5-212ENST00000620335 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF5-212ENST00000620335 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
RAPGEF5-212ENST00000620335 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
RAPGEF5-212ENST00000620335 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
RAPGEF5-212ENST00000620335 CECR2Q9BXF3 1484 aa12.56□□□□□ -0.4
RAPGEF5-212ENST00000620335 HSP90AA1P07900 732 aaKnown RBP12.56□□□□□ -0.4
RAPGEF5-212ENST00000620335 CDCA8Q53HL2 280 aa12.56□□□□□ -0.4
RAPGEF5-212ENST00000620335 ACIN1Q9UKV3 1341 aaKnown RBP12.55□□□□□ -0.4
RAPGEF5-212ENST00000620335 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
RAPGEF5-212ENST00000620335 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
RAPGEF5-212ENST00000620335 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
RAPGEF5-212ENST00000620335 CDK11BP21127 795 aaKnown RBP12.54□□□□□ -0.4
RAPGEF5-212ENST00000620335 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
RAPGEF5-212ENST00000620335 EIF4G2P78344 907 aaKnown RBP eCLIP12.53□□□□□ -0.4
RAPGEF5-212ENST00000620335 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
RAPGEF5-212ENST00000620335 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF5-212ENST00000620335 PHF23Q9BUL5 403 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF5-212ENST00000620335 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF5-212ENST00000620335 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
RAPGEF5-212ENST00000620335 SOX12O15370 315 aa12.5□□□□□ -0.41
RAPGEF5-212ENST00000620335 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
RAPGEF5-212ENST00000620335 WRNQ14191 1432 aaPredicted RBP eCLIP12.5□□□□□ -0.41
RAPGEF5-212ENST00000620335 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF5-212ENST00000620335 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
RAPGEF5-212ENST00000620335 CLIP1P30622 1438 aa12.49□□□□□ -0.41
RAPGEF5-212ENST00000620335 MEX3CQ5U5Q3 659 aaKnown RBP12.49□□□□□ -0.41
RAPGEF5-212ENST00000620335 FAM9BQ8IZU0 186 aa12.49□□□□□ -0.41
RAPGEF5-212ENST00000620335 UPF2Q9HAU5 1272 aaKnown RBP12.48□□□□□ -0.41
RAPGEF5-212ENST00000620335 EFCAB2Q5VUJ9 269 aa12.46□□□□□ -0.41
RAPGEF5-212ENST00000620335 NUDCQ9Y266 331 aa12.46□□□□□ -0.42
RAPGEF5-212ENST00000620335 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
RAPGEF5-212ENST00000620335 SRPK2P78362 688 aaKnown RBP12.44□□□□□ -0.42
RAPGEF5-212ENST00000620335 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
RAPGEF5-212ENST00000620335 TULP1O00294 542 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF5-212ENST00000620335 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
RAPGEF5-212ENST00000620335 LAS1LQ9Y4W2 734 aaKnown RBP12.42□□□□□ -0.42
RAPGEF5-212ENST00000620335 STK26Q9P289 416 aa12.41□□□□□ -0.42
RAPGEF5-212ENST00000620335 CUX2O14529 1486 aa12.4□□□□□ -0.43
RAPGEF5-212ENST00000620335 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
RAPGEF5-212ENST00000620335 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
RAPGEF5-212ENST00000620335 DDX10Q13206 875 aaKnown RBP12.38□□□□□ -0.43
RAPGEF5-212ENST00000620335 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF5-212ENST00000620335 HNRNPUQ00839 825 aaKnown RBP eCLIP12.37□□□□□ -0.43
RAPGEF5-212ENST00000620335 TDRD9Q8NDG6 1382 aaKnown RBP12.37□□□□□ -0.43
RAPGEF5-212ENST00000620335 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF5-212ENST00000620335 EEA1Q15075 1411 aa12.36□□□□□ -0.43
RAPGEF5-212ENST00000620335 SOGA1O94964 1423 aa12.36□□□□□ -0.43
RAPGEF5-212ENST00000620335 MRS2Q9HD23 443 aa12.36□□□□□ -0.43
RAPGEF5-212ENST00000620335 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
RAPGEF5-212ENST00000620335 ISY1Q9ULR0 285 aaKnown RBP12.35□□□□□ -0.43
RAPGEF5-212ENST00000620335 G3V3G9 751 aa12.34□□□□□ -0.43
RAPGEF5-212ENST00000620335 MSH5O43196 834 aa12.34□□□□□ -0.43
RAPGEF5-212ENST00000620335 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
RAPGEF5-212ENST00000620335 PNNQ9H307 717 aaKnown RBP12.34□□□□□ -0.43
RAPGEF5-212ENST00000620335 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF5-212ENST00000620335 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
RAPGEF5-212ENST00000620335 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF5-212ENST00000620335 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
RAPGEF5-212ENST00000620335 WASHC2CQ9Y4E1 1318 aa12.33□□□□□ -0.44
RAPGEF5-212ENST00000620335 KIF3BO15066 747 aa12.33□□□□□ -0.44
RAPGEF5-212ENST00000620335 HDGFL2Q7Z4V5 671 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF5-212ENST00000620335 ANP32BQ92688 251 aaKnown RBP12.33□□□□□ -0.44
RAPGEF5-212ENST00000620335 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
RAPGEF5-212ENST00000620335 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
RAPGEF5-212ENST00000620335 FOXD1Q16676 465 aa12.31□□□□□ -0.44
RAPGEF5-212ENST00000620335 RTF1Q92541 710 aaKnown RBP12.31□□□□□ -0.44
RAPGEF5-212ENST00000620335 NGDNQ8NEJ9 315 aaKnown RBP12.31□□□□□ -0.44
RAPGEF5-212ENST00000620335 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
RAPGEF5-212ENST00000620335 EVA1CP58658 441 aa12.3□□□□□ -0.44
RAPGEF5-212ENST00000620335 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
RAPGEF5-212ENST00000620335 JPH4Q96JJ6 628 aa12.28□□□□□ -0.44
RAPGEF5-212ENST00000620335 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
RAPGEF5-212ENST00000620335 SPAG9O60271 1321 aaKnown RBP12.28□□□□□ -0.44
RAPGEF5-212ENST00000620335 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
RAPGEF5-212ENST00000620335 DCAF11Q8TEB1 546 aa12.27□□□□□ -0.44
RAPGEF5-212ENST00000620335 GTF2E1P29083 439 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF5-212ENST00000620335 FTSJ3Q8IY81 847 aaKnown RBP12.26□□□□□ -0.45
RAPGEF5-212ENST00000620335 TMF1P82094 1093 aa12.25□□□□□ -0.45
RAPGEF5-212ENST00000620335 HIRIP3Q9BW71 556 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF5-212ENST00000620335 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
RAPGEF5-212ENST00000620335 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
RAPGEF5-212ENST00000620335 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
RAPGEF5-212ENST00000620335 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
RAPGEF5-212ENST00000620335 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
RAPGEF5-212ENST00000620335 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
RAPGEF5-212ENST00000620335 CLSTN1O94985 981 aa12.21□□□□□ -0.45
RAPGEF5-212ENST00000620335 FGD1P98174 961 aa12.21□□□□□ -0.45
RAPGEF5-212ENST00000620335 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF5-212ENST00000620335 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
RAPGEF5-212ENST00000620335 CCDC136Q96JN2 1154 aa12.19□□□□□ -0.46
RAPGEF5-212ENST00000620335 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms