RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1.01
SRSF3-206ENST00000620242 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1.01
SRSF3-206ENST00000620242 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1.01
SRSF3-206ENST00000620242 SHROOM2Q13796 1616 aa21.31■■□□□ 1
SRSF3-206ENST00000620242 FAM9AQ8IZU1 332 aaPredicted RBP21.31■■□□□ 1
SRSF3-206ENST00000620242 IQGAP2Q13576 1575 aa21.27■■□□□ 1
SRSF3-206ENST00000620242 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
SRSF3-206ENST00000620242 CARMIL2Q6F5E8 1435 aa21.25■□□□□ 0.99
SRSF3-206ENST00000620242 KIF21BO75037 1637 aa21.24■□□□□ 0.99
SRSF3-206ENST00000620242 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
SRSF3-206ENST00000620242 CTTNBP2Q8WZ74 1663 aa21.2■□□□□ 0.98
SRSF3-206ENST00000620242 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
SRSF3-206ENST00000620242 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
SRSF3-206ENST00000620242 UGGT2Q9NYU1 1516 aa21.17■□□□□ 0.98
SRSF3-206ENST00000620242 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
SRSF3-206ENST00000620242 TNIKQ9UKE5 1360 aa21.11■□□□□ 0.97
SRSF3-206ENST00000620242 ERCC6L2Q5T890 1561 aa21.1■□□□□ 0.97
SRSF3-206ENST00000620242 PTPRGP23470 1445 aa21.08■□□□□ 0.97
SRSF3-206ENST00000620242 DISP1Q96F81 1524 aa21.05■□□□□ 0.96
SRSF3-206ENST00000620242 KIAA0556O60303 1618 aa21.03■□□□□ 0.96
SRSF3-206ENST00000620242 NPM1P06748 294 aaKnown RBP eCLIP21■□□□□ 0.95
SRSF3-206ENST00000620242 EFCAB5A4FU69 1503 aa20.98■□□□□ 0.95
SRSF3-206ENST00000620242 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
SRSF3-206ENST00000620242 SAMD9Q5K651 1589 aa20.93■□□□□ 0.94
SRSF3-206ENST00000620242 UACAQ9BZF9 1416 aa20.93■□□□□ 0.94
SRSF3-206ENST00000620242 TTBK1Q5TCY1 1321 aaPredicted RBP20.92■□□□□ 0.94
SRSF3-206ENST00000620242 UHRF1BP1LA0JNW5 1464 aa20.91■□□□□ 0.94
SRSF3-206ENST00000620242 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
SRSF3-206ENST00000620242 ABCC2Q92887 1545 aa20.87■□□□□ 0.93
SRSF3-206ENST00000620242 P3H3Q8IVL6 736 aa20.86■□□□□ 0.93
SRSF3-206ENST00000620242 ADCY10Q96PN6 1610 aa20.84■□□□□ 0.93
SRSF3-206ENST00000620242 FMN1Q68DA7 1419 aa20.82■□□□□ 0.92
SRSF3-206ENST00000620242 FHOD3Q2V2M9 1422 aa20.8■□□□□ 0.92
SRSF3-206ENST00000620242 MAPKBP1O60336 1514 aa20.79■□□□□ 0.92
SRSF3-206ENST00000620242 ABCA8O94911 1581 aa20.79■□□□□ 0.92
SRSF3-206ENST00000620242 KDM5BQ9UGL1 1544 aa20.78■□□□□ 0.92
SRSF3-206ENST00000620242 PLB1Q6P1J6 1458 aa20.78■□□□□ 0.92
SRSF3-206ENST00000620242 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
SRSF3-206ENST00000620242 CLIP1P30622 1438 aa20.78■□□□□ 0.92
SRSF3-206ENST00000620242 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
SRSF3-206ENST00000620242 RAPGEF6Q8TEU7 1601 aa20.73■□□□□ 0.91
SRSF3-206ENST00000620242 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
SRSF3-206ENST00000620242 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
SRSF3-206ENST00000620242 ASXL2Q76L83 1435 aa20.67■□□□□ 0.9
SRSF3-206ENST00000620242 ABCC10Q5T3U5 1492 aa20.67■□□□□ 0.9
SRSF3-206ENST00000620242 ZCCHC11Q5TAX3 1644 aaKnown RBP20.67■□□□□ 0.9
SRSF3-206ENST00000620242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
SRSF3-206ENST00000620242 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
SRSF3-206ENST00000620242 ATP10BO94823 1461 aa20.63■□□□□ 0.89
SRSF3-206ENST00000620242 CDK11AQ9UQ88 783 aaPredicted RBP20.63■□□□□ 0.89
SRSF3-206ENST00000620242 HECW1Q76N89 1606 aa20.63■□□□□ 0.89
SRSF3-206ENST00000620242 NUP153P49790 1475 aaKnown RBP20.62■□□□□ 0.89
SRSF3-206ENST00000620242 FAM69CQ0P6D2 419 aa20.62■□□□□ 0.89
SRSF3-206ENST00000620242 WDR7Q9Y4E6 1490 aa20.62■□□□□ 0.89
SRSF3-206ENST00000620242 ATP1B4Q9UN42 357 aaPredicted RBP20.61■□□□□ 0.89
SRSF3-206ENST00000620242 CASKIN1Q8WXD9 1431 aa20.61■□□□□ 0.89
SRSF3-206ENST00000620242 PLEKHD1A6NEE1 506 aa20.6■□□□□ 0.89
SRSF3-206ENST00000620242 FYCO1Q9BQS8 1478 aa20.57■□□□□ 0.88
SRSF3-206ENST00000620242 DIP2BQ9P265 1576 aa20.57■□□□□ 0.88
SRSF3-206ENST00000620242 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
SRSF3-206ENST00000620242 GLI2P10070 1586 aa20.56■□□□□ 0.88
SRSF3-206ENST00000620242 EPRSP07814 1512 aaKnown RBP20.55■□□□□ 0.88
SRSF3-206ENST00000620242 ARID3CA6NKF2 412 aa20.54■□□□□ 0.88
SRSF3-206ENST00000620242 KIF13AQ9H1H9 1805 aa20.5■□□□□ 0.87
SRSF3-206ENST00000620242 KCNH8Q96L42 1107 aa20.5■□□□□ 0.87
SRSF3-206ENST00000620242 PCF11O94913 1555 aaKnown RBP20.48■□□□□ 0.87
SRSF3-206ENST00000620242 VPS8Q8N3P4 1428 aa20.46■□□□□ 0.87
SRSF3-206ENST00000620242 TEX14Q8IWB6 1497 aa20.46■□□□□ 0.87
SRSF3-206ENST00000620242 CDK13Q14004 1512 aaKnown RBP20.45■□□□□ 0.86
SRSF3-206ENST00000620242 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
SRSF3-206ENST00000620242 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
SRSF3-206ENST00000620242 TROQ12816 1431 aaPredicted RBP20.42■□□□□ 0.86
SRSF3-206ENST00000620242 MAP3K4Q9Y6R4 1608 aa20.41■□□□□ 0.86
SRSF3-206ENST00000620242 MAGI3Q5TCQ9 1506 aa20.39■□□□□ 0.85
SRSF3-206ENST00000620242 APLP2Q06481 763 aa20.39■□□□□ 0.85
SRSF3-206ENST00000620242 ABCA9Q8IUA7 1624 aa20.38■□□□□ 0.85
SRSF3-206ENST00000620242 PHLDB1Q86UU1 1377 aa20.38■□□□□ 0.85
SRSF3-206ENST00000620242 MTUS2Q5JR59 1369 aa20.35■□□□□ 0.85
SRSF3-206ENST00000620242 KIF14Q15058 1648 aa20.35■□□□□ 0.85
SRSF3-206ENST00000620242 TSPOAP1O95153 1857 aa20.33■□□□□ 0.84
SRSF3-206ENST00000620242 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
SRSF3-206ENST00000620242 LRRIQ1Q96JM4 1722 aa20.32■□□□□ 0.84
SRSF3-206ENST00000620242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.3■□□□□ 0.849e-8■□□□□ 9.5
SRSF3-206ENST00000620242 NEO1Q92859 1461 aa20.29■□□□□ 0.84
SRSF3-206ENST00000620242 EHBP1L1Q8N3D4 1523 aa20.27■□□□□ 0.84
SRSF3-206ENST00000620242 ARAP3Q8WWN8 1544 aa20.27■□□□□ 0.84
SRSF3-206ENST00000620242 CFAP74Q9C0B2 1584 aa20.27■□□□□ 0.84
SRSF3-206ENST00000620242 PPRC1Q5VV67 1664 aaKnown RBP20.26■□□□□ 0.83
SRSF3-206ENST00000620242 PLCH2O75038 1416 aa20.26■□□□□ 0.83
SRSF3-206ENST00000620242 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
SRSF3-206ENST00000620242 EFCAB2Q5VUJ9 269 aa20.25■□□□□ 0.83
SRSF3-206ENST00000620242 KDM6BO15054 1643 aa20.24■□□□□ 0.83
SRSF3-206ENST00000620242 TTC37Q6PGP7 1564 aa20.23■□□□□ 0.83
SRSF3-206ENST00000620242 FANCAO15360 1455 aa20.23■□□□□ 0.83
SRSF3-206ENST00000620242 MYO5CQ9NQX4 1742 aa20.21■□□□□ 0.83
SRSF3-206ENST00000620242 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
SRSF3-206ENST00000620242 LRRC9Q6ZRR7 1453 aa20.19■□□□□ 0.82
SRSF3-206ENST00000620242 AKNAQ7Z591 1439 aa20.18■□□□□ 0.82
SRSF3-206ENST00000620242 ARHGAP5Q13017 1502 aa20.17■□□□□ 0.82
SRSF3-206ENST00000620242 SUPT6HQ7KZ85 1726 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms