RNA–Protein interactions for RNA: ENST00000620208.1

AC009560.1-201, humanhuman

BASIC

Gene AC009560.1, Length 434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009560.1-201ENST00000620208 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
AC009560.1-201ENST00000620208 PRG4Q92954 1404 aaPredicted RBP23.89■■□□□ 1.41
AC009560.1-201ENST00000620208 ERCC6L2Q5T890 1561 aa23.88■■□□□ 1.41
AC009560.1-201ENST00000620208 RAPGEF2Q9Y4G8 1499 aa23.87■■□□□ 1.41
AC009560.1-201ENST00000620208 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
AC009560.1-201ENST00000620208 CSRNP3Q8WYN3 585 aa23.82■■□□□ 1.4
AC009560.1-201ENST00000620208 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
AC009560.1-201ENST00000620208 EEA1Q15075 1411 aa23.74■■□□□ 1.39
AC009560.1-201ENST00000620208 IQGAP2Q13576 1575 aa23.65■■□□□ 1.38
AC009560.1-201ENST00000620208 CARMIL2Q6F5E8 1435 aa23.65■■□□□ 1.38
AC009560.1-201ENST00000620208 PTPRGP23470 1445 aa23.63■■□□□ 1.37
AC009560.1-201ENST00000620208 UGGT2Q9NYU1 1516 aa23.63■■□□□ 1.37
AC009560.1-201ENST00000620208 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
AC009560.1-201ENST00000620208 DISP1Q96F81 1524 aa23.61■■□□□ 1.37
AC009560.1-201ENST00000620208 TRHP20396 242 aaPredicted RBP23.6■■□□□ 1.37
AC009560.1-201ENST00000620208 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
AC009560.1-201ENST00000620208 NPM1P06748 294 aaKnown RBP eCLIP23.52■■□□□ 1.36
AC009560.1-201ENST00000620208 UHRF1BP1LA0JNW5 1464 aa23.46■■□□□ 1.35
AC009560.1-201ENST00000620208 GOLGA3Q08378 1498 aa23.46■■□□□ 1.35
AC009560.1-201ENST00000620208 UACAQ9BZF9 1416 aa23.45■■□□□ 1.34
AC009560.1-201ENST00000620208 ADCY10Q96PN6 1610 aa23.44■■□□□ 1.34
AC009560.1-201ENST00000620208 TTBK1Q5TCY1 1321 aaPredicted RBP23.43■■□□□ 1.34
AC009560.1-201ENST00000620208 CTTNBP2Q8WZ74 1663 aa23.43■■□□□ 1.34
AC009560.1-201ENST00000620208 KIAA0556O60303 1618 aa23.43■■□□□ 1.34
AC009560.1-201ENST00000620208 MAPKBP1O60336 1514 aa23.39■■□□□ 1.34
AC009560.1-201ENST00000620208 KIF21BO75037 1637 aa23.39■■□□□ 1.33
AC009560.1-201ENST00000620208 ABCC2Q92887 1545 aa23.38■■□□□ 1.33
AC009560.1-201ENST00000620208 ABCC10Q5T3U5 1492 aa23.35■■□□□ 1.33
AC009560.1-201ENST00000620208 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.33
AC009560.1-201ENST00000620208 FAM69CQ0P6D2 419 aa23.32■■□□□ 1.32
AC009560.1-201ENST00000620208 P3H3Q8IVL6 736 aa23.31■■□□□ 1.32
AC009560.1-201ENST00000620208 PLB1Q6P1J6 1458 aa23.29■■□□□ 1.32
AC009560.1-201ENST00000620208 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
AC009560.1-201ENST00000620208 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
AC009560.1-201ENST00000620208 ABCA8O94911 1581 aa23.26■■□□□ 1.31
AC009560.1-201ENST00000620208 ASXL2Q76L83 1435 aa23.25■■□□□ 1.31
AC009560.1-201ENST00000620208 DIP2BQ9P265 1576 aa23.18■■□□□ 1.3
AC009560.1-201ENST00000620208 KIF13AQ9H1H9 1805 aa23.18■■□□□ 1.3
AC009560.1-201ENST00000620208 RANGAP1P46060 587 aaPredicted RBP23.18■■□□□ 1.3
AC009560.1-201ENST00000620208 EHMT2Q96KQ7 1210 aa23.16■■□□□ 1.3
AC009560.1-201ENST00000620208 EFCAB5A4FU69 1503 aa23.14■■□□□ 1.3
AC009560.1-201ENST00000620208 ATP10BO94823 1461 aa23.14■■□□□ 1.29
AC009560.1-201ENST00000620208 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.29
AC009560.1-201ENST00000620208 GLI2P10070 1586 aa23.14■■□□□ 1.29
AC009560.1-201ENST00000620208 EPRSP07814 1512 aaKnown RBP23.12■■□□□ 1.29
AC009560.1-201ENST00000620208 ZCCHC11Q5TAX3 1644 aaKnown RBP23.11■■□□□ 1.29
AC009560.1-201ENST00000620208 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.29
AC009560.1-201ENST00000620208 WDR7Q9Y4E6 1490 aa23.08■■□□□ 1.29
AC009560.1-201ENST00000620208 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
AC009560.1-201ENST00000620208 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
AC009560.1-201ENST00000620208 RAPGEF6Q8TEU7 1601 aa23.02■■□□□ 1.28
AC009560.1-201ENST00000620208 ARID3CA6NKF2 412 aa23■■□□□ 1.27
AC009560.1-201ENST00000620208 FMN1Q68DA7 1419 aa22.99■■□□□ 1.27
AC009560.1-201ENST00000620208 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
AC009560.1-201ENST00000620208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.94■■□□□ 1.26
AC009560.1-201ENST00000620208 HNRNPUL2Q1KMD3 747 aaKnown RBP22.94■■□□□ 1.26
AC009560.1-201ENST00000620208 CD109Q6YHK3 1445 aa22.93■■□□□ 1.26
AC009560.1-201ENST00000620208 MAP3K4Q9Y6R4 1608 aa22.93■■□□□ 1.26
AC009560.1-201ENST00000620208 MAGI3Q5TCQ9 1506 aa22.91■■□□□ 1.26
AC009560.1-201ENST00000620208 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
AC009560.1-201ENST00000620208 TEX14Q8IWB6 1497 aa22.88■■□□□ 1.25
AC009560.1-201ENST00000620208 CLIP1P30622 1438 aa22.88■■□□□ 1.25
AC009560.1-201ENST00000620208 COL17A1Q9UMD9 1497 aaPredicted RBP22.86■■□□□ 1.25
AC009560.1-201ENST00000620208 TSPOAP1O95153 1857 aa22.85■■□□□ 1.25
AC009560.1-201ENST00000620208 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
AC009560.1-201ENST00000620208 CASKIN1Q8WXD9 1431 aa22.82■■□□□ 1.24
AC009560.1-201ENST00000620208 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
AC009560.1-201ENST00000620208 ATP1B4Q9UN42 357 aaPredicted RBP22.82■■□□□ 1.24
AC009560.1-201ENST00000620208 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
AC009560.1-201ENST00000620208 PHLDB1Q86UU1 1377 aa22.81■■□□□ 1.24
AC009560.1-201ENST00000620208 KDM6BO15054 1643 aa22.79■■□□□ 1.24
AC009560.1-201ENST00000620208 ABCA9Q8IUA7 1624 aa22.79■■□□□ 1.24
AC009560.1-201ENST00000620208 CDK13Q14004 1512 aaKnown RBP22.78■■□□□ 1.24
AC009560.1-201ENST00000620208 HECW1Q76N89 1606 aa22.76■■□□□ 1.23
AC009560.1-201ENST00000620208 CEP162Q5TB80 1403 aa22.73■■□□□ 1.23
AC009560.1-201ENST00000620208 ARAP3Q8WWN8 1544 aa22.72■■□□□ 1.23
AC009560.1-201ENST00000620208 NEO1Q92859 1461 aa22.71■■□□□ 1.23
AC009560.1-201ENST00000620208 TROQ12816 1431 aaPredicted RBP22.7■■□□□ 1.22
AC009560.1-201ENST00000620208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.22
AC009560.1-201ENST00000620208 FYCO1Q9BQS8 1478 aa22.69■■□□□ 1.22
AC009560.1-201ENST00000620208 CCDC18Q5T9S5 1454 aa22.67■■□□□ 1.22
AC009560.1-201ENST00000620208 PLCH2O75038 1416 aa22.66■■□□□ 1.22
AC009560.1-201ENST00000620208 PCF11O94913 1555 aaKnown RBP22.63■■□□□ 1.21
AC009560.1-201ENST00000620208 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
AC009560.1-201ENST00000620208 RAPGEF3O95398 923 aa22.61■■□□□ 1.21
AC009560.1-201ENST00000620208 EFCAB2Q5VUJ9 269 aa22.61■■□□□ 1.21
AC009560.1-201ENST00000620208 LRRIQ1Q96JM4 1722 aa22.61■■□□□ 1.21
AC009560.1-201ENST00000620208 FANCAO15360 1455 aa22.58■■□□□ 1.2
AC009560.1-201ENST00000620208 TTC37Q6PGP7 1564 aa22.58■■□□□ 1.2
AC009560.1-201ENST00000620208 KDM4FA0A1W2PPD8 638 aa22.57■■□□□ 1.2
AC009560.1-201ENST00000620208 DENND4BO75064 1496 aaPredicted RBP22.53■■□□□ 1.2
AC009560.1-201ENST00000620208 KIF14Q15058 1648 aa22.52■■□□□ 1.2
AC009560.1-201ENST00000620208 VPS8Q8N3P4 1428 aa22.49■■□□□ 1.19
AC009560.1-201ENST00000620208 SCAPERQ9BY12 1400 aa22.48■■□□□ 1.19
AC009560.1-201ENST00000620208 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
AC009560.1-201ENST00000620208 CFAP74Q9C0B2 1584 aa22.46■■□□□ 1.19
AC009560.1-201ENST00000620208 MTUS2Q5JR59 1369 aa22.45■■□□□ 1.18
AC009560.1-201ENST00000620208 ADGRL1O94910 1474 aa22.44■■□□□ 1.18
AC009560.1-201ENST00000620208 FRMPD1Q5SYB0 1578 aa22.44■■□□□ 1.18
AC009560.1-201ENST00000620208 GPATCH8Q9UKJ3 1502 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms