RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
TP53-225ENST00000619485 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
TP53-225ENST00000619485 VPS8Q8N3P4 1428 aa15.44■□□□□ 0.06
TP53-225ENST00000619485 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
TP53-225ENST00000619485 KANK4Q5T7N3 995 aaPredicted RBP15.4■□□□□ 0.06
TP53-225ENST00000619485 P3H3Q8IVL6 736 aa15.4■□□□□ 0.06
TP53-225ENST00000619485 TDRD9Q8NDG6 1382 aaKnown RBP15.4■□□□□ 0.06
TP53-225ENST00000619485 LAMC3Q9Y6N6 1575 aa15.39■□□□□ 0.05
TP53-225ENST00000619485 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
TP53-225ENST00000619485 CARMIL1Q5VZK9 1371 aa15.39■□□□□ 0.05
TP53-225ENST00000619485 APLP2Q06481 763 aa15.37■□□□□ 0.05
TP53-225ENST00000619485 MIER1Q8N108 512 aa15.36■□□□□ 0.05
TP53-225ENST00000619485 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.05
TP53-225ENST00000619485 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
TP53-225ENST00000619485 PDS5BQ9NTI5 1447 aa15.28■□□□□ 0.04
TP53-225ENST00000619485 FHOD3Q2V2M9 1422 aa15.24■□□□□ 0.03
TP53-225ENST00000619485 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.038e-7■■■□□ 16.1
TP53-225ENST00000619485 ABCA5Q8WWZ7 1642 aa15.24■□□□□ 0.03
TP53-225ENST00000619485 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
TP53-225ENST00000619485 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
TP53-225ENST00000619485 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.02
TP53-225ENST00000619485 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.02
TP53-225ENST00000619485 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
TP53-225ENST00000619485 ITGAEP38570 1179 aa15.16■□□□□ 0.02
TP53-225ENST00000619485 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
TP53-225ENST00000619485 CUL7Q14999 1698 aa15.14■□□□□ 0.01
TP53-225ENST00000619485 CTTNBP2Q8WZ74 1663 aa15.14■□□□□ 0.01
TP53-225ENST00000619485 ZBTB22O15209 634 aa15.12■□□□□ 0.01
TP53-225ENST00000619485 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
TP53-225ENST00000619485 TIAM1Q13009 1591 aa15.1■□□□□ 0.01
TP53-225ENST00000619485 ARID3CA6NKF2 412 aa15.09■□□□□ 0.01
TP53-225ENST00000619485 LRRIQ1Q96JM4 1722 aa15.08■□□□□ 0
TP53-225ENST00000619485 PHLDB1Q86UU1 1377 aa15.07■□□□□ 0
TP53-225ENST00000619485 ERCC6Q03468 1493 aa15.07■□□□□ 0
TP53-225ENST00000619485 WDR62O43379 1518 aa15.05■□□□□ -0
TP53-225ENST00000619485 LRRC9Q6ZRR7 1453 aa15.03■□□□□ -0
TP53-225ENST00000619485 DHX57Q6P158 1386 aaKnown RBP15.03■□□□□ -0
TP53-225ENST00000619485 ADAMTS12P58397 1594 aa15.03■□□□□ -0
TP53-225ENST00000619485 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
TP53-225ENST00000619485 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
TP53-225ENST00000619485 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
TP53-225ENST00000619485 EIF4G3O43432 1585 aaKnown RBP15□□□□□ -0.01
TP53-225ENST00000619485 CFAP43Q8NDM7 1665 aa15□□□□□ -0.01
TP53-225ENST00000619485 SAMD9Q5K651 1589 aa15□□□□□ -0.01
TP53-225ENST00000619485 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
TP53-225ENST00000619485 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
TP53-225ENST00000619485 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.01
TP53-225ENST00000619485 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.01
TP53-225ENST00000619485 FAM50AQ14320 339 aaKnown RBP14.96□□□□□ -0.02
TP53-225ENST00000619485 CASKIN1Q8WXD9 1431 aa14.95□□□□□ -0.02
TP53-225ENST00000619485 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
TP53-225ENST00000619485 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
TP53-225ENST00000619485 MAGI3Q5TCQ9 1506 aa14.94□□□□□ -0.02
TP53-225ENST00000619485 FBLN2P98095 1184 aa14.94□□□□□ -0.02
TP53-225ENST00000619485 FYCO1Q9BQS8 1478 aa14.94□□□□□ -0.02
TP53-225ENST00000619485 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
TP53-225ENST00000619485 SUPT16HQ9Y5B9 1047 aaKnown RBP14.93□□□□□ -0.02
TP53-225ENST00000619485 IQGAP2Q13576 1575 aa14.91□□□□□ -0.02
TP53-225ENST00000619485 CDK13Q14004 1512 aaKnown RBP14.91□□□□□ -0.02
TP53-225ENST00000619485 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
TP53-225ENST00000619485 MAP3K1Q13233 1512 aa14.89□□□□□ -0.03
TP53-225ENST00000619485 BCL11AQ9H165 835 aa14.88□□□□□ -0.03
TP53-225ENST00000619485 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
TP53-225ENST00000619485 FMN1Q68DA7 1419 aa14.86□□□□□ -0.03
TP53-225ENST00000619485 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
TP53-225ENST00000619485 RAB3GAP2Q9H2M9 1393 aa14.86□□□□□ -0.03
TP53-225ENST00000619485 GRIN2AQ12879 1464 aa14.86□□□□□ -0.03
TP53-225ENST00000619485 DISP1Q96F81 1524 aa14.85□□□□□ -0.03
TP53-225ENST00000619485 PTPRKQ15262 1439 aa14.85□□□□□ -0.03
TP53-225ENST00000619485 PRKCSHP14314 528 aaPredicted RBP14.85□□□□□ -0.03
TP53-225ENST00000619485 FOXD1Q16676 465 aa14.84□□□□□ -0.03
TP53-225ENST00000619485 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.03
TP53-225ENST00000619485 BCANQ96GW7 911 aa14.83□□□□□ -0.04
TP53-225ENST00000619485 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
TP53-225ENST00000619485 NCOA2Q15596 1464 aa14.81□□□□□ -0.04
TP53-225ENST00000619485 FGD6Q6ZV73 1430 aa14.79□□□□□ -0.04
TP53-225ENST00000619485 KIAA0556O60303 1618 aa14.79□□□□□ -0.04
TP53-225ENST00000619485 MAPKBP1O60336 1514 aa14.78□□□□□ -0.04
TP53-225ENST00000619485 UGGT2Q9NYU1 1516 aa14.78□□□□□ -0.04
TP53-225ENST00000619485 DDX10Q13206 875 aaKnown RBP14.78□□□□□ -0.04
TP53-225ENST00000619485 EPRSP07814 1512 aaKnown RBP14.78□□□□□ -0.04
TP53-225ENST00000619485 NPM3O75607 178 aaKnown RBP14.77□□□□□ -0.04
TP53-225ENST00000619485 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.05
TP53-225ENST00000619485 HIRIP3Q9BW71 556 aaPredicted RBP14.77□□□□□ -0.05
TP53-225ENST00000619485 KIAA0586Q9BVV6 1533 aa14.77□□□□□ -0.05
TP53-225ENST00000619485 PLB1Q6P1J6 1458 aa14.75□□□□□ -0.05
TP53-225ENST00000619485 CHIC2Q9UKJ5 165 aa14.75□□□□□ -0.05
TP53-225ENST00000619485 SYNJ2O15056 1496 aa14.75□□□□□ -0.05
TP53-225ENST00000619485 SETD5Q9C0A6 1442 aa14.74□□□□□ -0.05
TP53-225ENST00000619485 NUP153P49790 1475 aaKnown RBP14.74□□□□□ -0.05
TP53-225ENST00000619485 TSHZ2Q9NRE2 1034 aa14.73□□□□□ -0.05
TP53-225ENST00000619485 MAGI1Q96QZ7 1491 aaPredicted RBP14.73□□□□□ -0.05
TP53-225ENST00000619485 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
TP53-225ENST00000619485 ZNF644Q9H582 1327 aaPredicted RBP14.72□□□□□ -0.05
TP53-225ENST00000619485 SUPT6HQ7KZ85 1726 aaKnown RBP14.71□□□□□ -0.05
TP53-225ENST00000619485 MYOM3Q5VTT5 1437 aa14.71□□□□□ -0.06
TP53-225ENST00000619485 EHBP1L1Q8N3D4 1523 aa14.7□□□□□ -0.06
TP53-225ENST00000619485 FKBP8Q14318 412 aa14.7□□□□□ -0.06
TP53-225ENST00000619485 KDM6BO15054 1643 aa14.7□□□□□ -0.06
TP53-225ENST00000619485 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms