RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 P3H3Q8IVL6 736 aa44.53■■■■■ 4.72
KHSRP-213ENST00000619396 CUL7Q14999 1698 aa44.51■■■■■ 4.72
KHSRP-213ENST00000619396 CLSPNQ9HAW4 1339 aa44.44■■■■■ 4.71
KHSRP-213ENST00000619396 RRBP1Q9P2E9 1410 aaKnown RBP44.44■■■■■ 4.7
KHSRP-213ENST00000619396 ABCA5Q8WWZ7 1642 aa44.43■■■■■ 4.7
KHSRP-213ENST00000619396 DHX57Q6P158 1386 aaKnown RBP44.4■■■■■ 4.7
KHSRP-213ENST00000619396 TIAM1Q13009 1591 aa44.37■■■■■ 4.69
KHSRP-213ENST00000619396 GTF3C3Q9Y5Q9 886 aa44.36■■■■■ 4.69
KHSRP-213ENST00000619396 GAPVD1Q14C86 1478 aa44.36■■■■■ 4.69
KHSRP-213ENST00000619396 CTTNBP2Q8WZ74 1663 aa44.34■■■■■ 4.69
KHSRP-213ENST00000619396 FHOD3Q2V2M9 1422 aa44.33■■■■■ 4.69
KHSRP-213ENST00000619396 PCF11O94913 1555 aaKnown RBP44.29■■■■■ 4.68
KHSRP-213ENST00000619396 MIER1Q8N108 512 aa44.28■■■■■ 4.68
KHSRP-213ENST00000619396 TARBP1Q13395 1621 aaKnown RBP44.26■■■■■ 4.68
KHSRP-213ENST00000619396 FHAD1B1AJZ9 1412 aa44.25■■■■■ 4.67
KHSRP-213ENST00000619396 MAP3K1Q13233 1512 aa44.23■■■■■ 4.67
KHSRP-213ENST00000619396 CCNB3Q8WWL7 1395 aa44.22■■■■■ 4.67
KHSRP-213ENST00000619396 ATP1B4Q9UN42 357 aaPredicted RBP44.22■■■■■ 4.67
KHSRP-213ENST00000619396 LRRC9Q6ZRR7 1453 aa44.18■■■■■ 4.66
KHSRP-213ENST00000619396 EFCAB5A4FU69 1503 aa44.17■■■■■ 4.66
KHSRP-213ENST00000619396 ITGAEP38570 1179 aa44.12■■■■■ 4.65
KHSRP-213ENST00000619396 CFAP43Q8NDM7 1665 aa44.11■■■■■ 4.65
KHSRP-213ENST00000619396 MRC2Q9UBG0 1479 aa44.06■■■■■ 4.64
KHSRP-213ENST00000619396 PHLDB1Q86UU1 1377 aa44.03■■■■■ 4.64
KHSRP-213ENST00000619396 AQRO60306 1485 aaKnown RBP eCLIP44.02■■■■■ 4.641e-7■■■■□ 21.5
KHSRP-213ENST00000619396 FYCO1Q9BQS8 1478 aa44.01■■■■■ 4.64
KHSRP-213ENST00000619396 YTHDC1Q96MU7 727 aaKnown RBP44.01■■■■■ 4.64
KHSRP-213ENST00000619396 CASKIN1Q8WXD9 1431 aa44■■■■■ 4.63
KHSRP-213ENST00000619396 PBRM1Q86U86 1689 aa43.98■■■■■ 4.63
KHSRP-213ENST00000619396 SAMD9Q5K651 1589 aa43.93■■■■■ 4.62
KHSRP-213ENST00000619396 FMN1Q68DA7 1419 aa43.88■■■■■ 4.62
KHSRP-213ENST00000619396 SNAPC4Q5SXM2 1469 aa43.88■■■■■ 4.61
KHSRP-213ENST00000619396 FAM50AQ14320 339 aaKnown RBP43.8■■■■■ 4.6
KHSRP-213ENST00000619396 ZNF608Q9ULD9 1512 aaPredicted RBP43.79■■■■■ 4.6
KHSRP-213ENST00000619396 ADAMTS12P58397 1594 aa43.77■■■■■ 4.6
KHSRP-213ENST00000619396 LRRIQ1Q96JM4 1722 aa43.77■■■■■ 4.6
KHSRP-213ENST00000619396 RAB3GAP2Q9H2M9 1393 aa43.75■■■■■ 4.59
KHSRP-213ENST00000619396 WDR62O43379 1518 aa43.74■■■■■ 4.59
KHSRP-213ENST00000619396 GRIN2BQ13224 1484 aa43.71■■■■■ 4.59
KHSRP-213ENST00000619396 IFT140Q96RY7 1462 aa43.68■■■■■ 4.58
KHSRP-213ENST00000619396 MAPKBP1O60336 1514 aa43.66■■■■■ 4.58
KHSRP-213ENST00000619396 SETD5Q9C0A6 1442 aa43.62■■■■■ 4.57
KHSRP-213ENST00000619396 IQGAP2Q13576 1575 aa43.6■■■■■ 4.57
KHSRP-213ENST00000619396 MTUS2Q5JR59 1369 aa43.58■■■■■ 4.57
KHSRP-213ENST00000619396 ERCC6Q03468 1493 aa43.57■■■■■ 4.57
KHSRP-213ENST00000619396 FGD6Q6ZV73 1430 aa43.46■■■■■ 4.55
KHSRP-213ENST00000619396 EIF4G3O43432 1585 aaKnown RBP43.46■■■■■ 4.55
KHSRP-213ENST00000619396 THOC2Q8NI27 1593 aaKnown RBP43.45■■■■■ 4.55
KHSRP-213ENST00000619396 NCOA2Q15596 1464 aa43.4■■■■■ 4.54
KHSRP-213ENST00000619396 MAGI3Q5TCQ9 1506 aa43.39■■■■■ 4.54
KHSRP-213ENST00000619396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.37■■■■■ 4.539e-6■□□□□ 9.6
KHSRP-213ENST00000619396 SUPT6HQ7KZ85 1726 aaKnown RBP43.32■■■■■ 4.53
KHSRP-213ENST00000619396 EHBP1L1Q8N3D4 1523 aa43.32■■■■■ 4.53
KHSRP-213ENST00000619396 UGGT2Q9NYU1 1516 aa43.31■■■■■ 4.52
KHSRP-213ENST00000619396 ARID3CA6NKF2 412 aa43.3■■■■■ 4.52
KHSRP-213ENST00000619396 HECW1Q76N89 1606 aa43.29■■■■■ 4.52
KHSRP-213ENST00000619396 MYOM3Q5VTT5 1437 aa43.27■■■■■ 4.52
KHSRP-213ENST00000619396 GRIN2AQ12879 1464 aa43.27■■■■■ 4.52
KHSRP-213ENST00000619396 CCDC18Q5T9S5 1454 aa43.26■■■■■ 4.52
KHSRP-213ENST00000619396 PTPRKQ15262 1439 aa43.25■■■■■ 4.51
KHSRP-213ENST00000619396 KIAA0586Q9BVV6 1533 aa43.24■■■■■ 4.51
KHSRP-213ENST00000619396 CDK13Q14004 1512 aaKnown RBP43.24■■■■■ 4.51
KHSRP-213ENST00000619396 EPRSP07814 1512 aaKnown RBP43.23■■■■■ 4.51
KHSRP-213ENST00000619396 SIN3AQ96ST3 1273 aa43.2■■■■■ 4.51
KHSRP-213ENST00000619396 DISP1Q96F81 1524 aa43.19■■■■■ 4.5
KHSRP-213ENST00000619396 ARHGEF11O15085 1522 aa43.17■■■■■ 4.5
KHSRP-213ENST00000619396 KIAA0556O60303 1618 aa43.16■■■■■ 4.5
KHSRP-213ENST00000619396 TIMELESSQ9UNS1 1208 aa43.15■■■■■ 4.5
KHSRP-213ENST00000619396 PTPN23Q9H3S7 1636 aa43.11■■■■■ 4.49
KHSRP-213ENST00000619396 MAGI1Q96QZ7 1491 aaPredicted RBP43.09■■■■■ 4.49
KHSRP-213ENST00000619396 CHMP7Q8WUX9 453 aaPredicted RBP43.09■■■■■ 4.49
KHSRP-213ENST00000619396 FBLN2P98095 1184 aa43.08■■■■■ 4.49
KHSRP-213ENST00000619396 CEP170Q5SW79 1584 aa43.05■■■■■ 4.48
KHSRP-213ENST00000619396 SYNJ2O15056 1496 aa43.02■■■■■ 4.48
KHSRP-213ENST00000619396 HFM1A2PYH4 1435 aa43■■■■■ 4.47
KHSRP-213ENST00000619396 NAIPQ13075 1403 aa42.94■■■■■ 4.46
KHSRP-213ENST00000619396 NUP153P49790 1475 aaKnown RBP42.94■■■■■ 4.46
KHSRP-213ENST00000619396 PPP1R15AO75807 674 aaPredicted RBP42.93■■■■■ 4.46
KHSRP-213ENST00000619396 RAPGEF6Q8TEU7 1601 aa42.91■■■■■ 4.46
KHSRP-213ENST00000619396 TCOF1Q13428 1488 aaKnown RBP42.91■■■■■ 4.46
KHSRP-213ENST00000619396 CHIC2Q9UKJ5 165 aa42.89■■■■■ 4.46
KHSRP-213ENST00000619396 KCNH8Q96L42 1107 aa42.85■■■■■ 4.45
KHSRP-213ENST00000619396 RRP7BPQ9NSQ0 103 aa42.84■■■■■ 4.45
KHSRP-213ENST00000619396 SUPT16HQ9Y5B9 1047 aaKnown RBP42.82■■■■■ 4.45
KHSRP-213ENST00000619396 DDX10Q13206 875 aaKnown RBP42.81■■■■■ 4.44
KHSRP-213ENST00000619396 UACAQ9BZF9 1416 aa42.8■■■■■ 4.44
KHSRP-213ENST00000619396 NUP160Q12769 1436 aa42.79■■■■■ 4.44
KHSRP-213ENST00000619396 PLB1Q6P1J6 1458 aa42.77■■■■■ 4.44
KHSRP-213ENST00000619396 MIA2Q96PC5 1412 aa42.76■■■■■ 4.44
KHSRP-213ENST00000619396 JPH4Q96JJ6 628 aa42.76■■■■■ 4.44
KHSRP-213ENST00000619396 KDM6BO15054 1643 aa42.67■■■■■ 4.42
KHSRP-213ENST00000619396 PRG4Q92954 1404 aaPredicted RBP42.66■■■■■ 4.42
KHSRP-213ENST00000619396 GCC2Q8IWJ2 1684 aa42.65■■■■■ 4.42
KHSRP-213ENST00000619396 ZNF644Q9H582 1327 aaPredicted RBP42.65■■■■■ 4.42
KHSRP-213ENST00000619396 TONSLQ96HA7 1378 aa42.64■■■■■ 4.42
KHSRP-213ENST00000619396 CARMIL2Q6F5E8 1435 aa42.63■■■■■ 4.41
KHSRP-213ENST00000619396 CDK11AQ9UQ88 783 aaPredicted RBP42.61■■■■■ 4.41
KHSRP-213ENST00000619396 HIRIP3Q9BW71 556 aaPredicted RBP42.59■■■■■ 4.41
KHSRP-213ENST00000619396 TROQ12816 1431 aaPredicted RBP42.53■■■■■ 4.4
KHSRP-213ENST00000619396 DAPK1P53355 1430 aa42.52■■■■■ 4.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms