RNA–Protein interactions for RNA: ENST00000619038.4

CDRT4-204, CMT1A duplicated region transcript 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT4, Length 2,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-204ENST00000619038 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.15
CDRT4-204ENST00000619038 PODXL2Q9NZ53 605 aa15.95■□□□□ 0.14
CDRT4-204ENST00000619038 NEFMP07197 916 aa15.94■□□□□ 0.14
CDRT4-204ENST00000619038 CLIP1P30622 1438 aa15.94■□□□□ 0.14
CDRT4-204ENST00000619038 ZMYND15Q9H091 742 aa15.94■□□□□ 0.14
CDRT4-204ENST00000619038 LAS1LQ9Y4W2 734 aaKnown RBP15.93■□□□□ 0.14
CDRT4-204ENST00000619038 RSPH6AQ9H0K4 717 aa15.88■□□□□ 0.13
CDRT4-204ENST00000619038 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
CDRT4-204ENST00000619038 GOLGA3Q08378 1498 aa15.88■□□□□ 0.13
CDRT4-204ENST00000619038 VPS8Q8N3P4 1428 aa15.88■□□□□ 0.13
CDRT4-204ENST00000619038 VSIG10Q8N0Z9 540 aa15.87■□□□□ 0.13
CDRT4-204ENST00000619038 SIN3AQ96ST3 1273 aa15.87■□□□□ 0.13
CDRT4-204ENST00000619038 USP35Q9P2H5 1018 aa15.86■□□□□ 0.13
CDRT4-204ENST00000619038 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
CDRT4-204ENST00000619038 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
CDRT4-204ENST00000619038 GSE1Q14687 1217 aa15.8■□□□□ 0.12
CDRT4-204ENST00000619038 EEA1Q15075 1411 aa15.8■□□□□ 0.12
CDRT4-204ENST00000619038 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
CDRT4-204ENST00000619038 RANGAP1P46060 587 aaPredicted RBP15.79■□□□□ 0.12
CDRT4-204ENST00000619038 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
CDRT4-204ENST00000619038 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
CDRT4-204ENST00000619038 GLIPR1L2Q4G1C9 344 aa15.77■□□□□ 0.12
CDRT4-204ENST00000619038 KANK4Q5T7N3 995 aaPredicted RBP15.77■□□□□ 0.12
CDRT4-204ENST00000619038 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.11
CDRT4-204ENST00000619038 SCRIBQ14160 1630 aa15.77■□□□□ 0.11
CDRT4-204ENST00000619038 FRAT1Q92837 279 aaPredicted RBP15.75■□□□□ 0.11
CDRT4-204ENST00000619038 CUX2O14529 1486 aa15.75■□□□□ 0.11
CDRT4-204ENST00000619038 CCDC184Q52MB2 194 aa15.73■□□□□ 0.11
CDRT4-204ENST00000619038 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
CDRT4-204ENST00000619038 WIZO95785 1651 aa15.72■□□□□ 0.11
CDRT4-204ENST00000619038 PPM1GO15355 546 aaPredicted RBP15.71■□□□□ 0.11
CDRT4-204ENST00000619038 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.1
CDRT4-204ENST00000619038 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
CDRT4-204ENST00000619038 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
CDRT4-204ENST00000619038 KIF21BO75037 1637 aa15.67■□□□□ 0.1
CDRT4-204ENST00000619038 CEP164Q9UPV0 1460 aa15.67■□□□□ 0.1
CDRT4-204ENST00000619038 NFKBIBQ15653 356 aa15.66■□□□□ 0.1
CDRT4-204ENST00000619038 NCAPD3P42695 1498 aa15.63■□□□□ 0.09
CDRT4-204ENST00000619038 FAM9BQ8IZU0 186 aa15.62■□□□□ 0.09
CDRT4-204ENST00000619038 RRAGDQ9NQL2 400 aaPredicted RBP15.61■□□□□ 0.09
CDRT4-204ENST00000619038 AKNAQ7Z591 1439 aa15.61■□□□□ 0.09
CDRT4-204ENST00000619038 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
CDRT4-204ENST00000619038 ZBED9Q6R2W3 1325 aa15.6■□□□□ 0.09
CDRT4-204ENST00000619038 PDE4AP27815 886 aa15.59■□□□□ 0.09
CDRT4-204ENST00000619038 HSP90AA2PQ14568 343 aaPredicted RBP15.57■□□□□ 0.08
CDRT4-204ENST00000619038 A0A0U1RQG5 324 aaPredicted RBP15.56■□□□□ 0.08
CDRT4-204ENST00000619038 SLC4A3P48751 1232 aa15.55■□□□□ 0.08
CDRT4-204ENST00000619038 BACH2Q9BYV9 841 aa15.55■□□□□ 0.08
CDRT4-204ENST00000619038 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
CDRT4-204ENST00000619038 RNF123Q5XPI4 1314 aa15.54■□□□□ 0.08
CDRT4-204ENST00000619038 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
CDRT4-204ENST00000619038 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.08
CDRT4-204ENST00000619038 RRP9O43818 475 aaKnown RBP15.52■□□□□ 0.07
CDRT4-204ENST00000619038 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
CDRT4-204ENST00000619038 TCERG1O14776 1098 aaKnown RBP15.5■□□□□ 0.07
CDRT4-204ENST00000619038 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
CDRT4-204ENST00000619038 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
CDRT4-204ENST00000619038 FRAT2O75474 233 aaPredicted RBP15.49■□□□□ 0.07
CDRT4-204ENST00000619038 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
CDRT4-204ENST00000619038 SMG6Q86US8 1419 aaKnown RBP15.47■□□□□ 0.07
CDRT4-204ENST00000619038 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
CDRT4-204ENST00000619038 AAMPQ13685 434 aa15.46■□□□□ 0.07
CDRT4-204ENST00000619038 HSP90AA1P07900 732 aaKnown RBP15.46■□□□□ 0.07
CDRT4-204ENST00000619038 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
CDRT4-204ENST00000619038 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
CDRT4-204ENST00000619038 SENP3-EIF4A1A0A087X0R7 540 aa15.44■□□□□ 0.06
CDRT4-204ENST00000619038 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
CDRT4-204ENST00000619038 FGD1P98174 961 aa15.42■□□□□ 0.06
CDRT4-204ENST00000619038 DDRGK1Q96HY6 314 aa15.42■□□□□ 0.06
CDRT4-204ENST00000619038 SKAP1Q86WV1 359 aa15.42■□□□□ 0.06
CDRT4-204ENST00000619038 MS4A1P11836 297 aa15.4■□□□□ 0.06
CDRT4-204ENST00000619038 EXOC6Q8TAG9 804 aa15.4■□□□□ 0.06
CDRT4-204ENST00000619038 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
CDRT4-204ENST00000619038 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
CDRT4-204ENST00000619038 PNNQ9H307 717 aaKnown RBP15.38■□□□□ 0.05
CDRT4-204ENST00000619038 POGKQ9P215 609 aa15.37■□□□□ 0.05
CDRT4-204ENST00000619038 PRDM4Q9UKN5 801 aa15.37■□□□□ 0.05
CDRT4-204ENST00000619038 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
CDRT4-204ENST00000619038 CLCN1P35523 988 aa15.33■□□□□ 0.04
CDRT4-204ENST00000619038 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
CDRT4-204ENST00000619038 TOP2AP11388 1531 aaKnown RBP15.32■□□□□ 0.04
CDRT4-204ENST00000619038 PDE4CQ08493 712 aa15.32■□□□□ 0.04
CDRT4-204ENST00000619038 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
CDRT4-204ENST00000619038 RGS3P49796 1198 aa15.31■□□□□ 0.04
CDRT4-204ENST00000619038 ARID4BQ4LE39 1312 aaPredicted RBP15.3■□□□□ 0.04
CDRT4-204ENST00000619038 NCOA2Q15596 1464 aa15.3■□□□□ 0.04
CDRT4-204ENST00000619038 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
CDRT4-204ENST00000619038 RRP1P56182 461 aaKnown RBP15.27■□□□□ 0.04
CDRT4-204ENST00000619038 ARXQ96QS3 562 aa15.26■□□□□ 0.03
CDRT4-204ENST00000619038 CALD1Q05682 793 aaKnown RBP15.25■□□□□ 0.03
CDRT4-204ENST00000619038 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDRT4-204ENST00000619038 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
CDRT4-204ENST00000619038 KDM5BQ9UGL1 1544 aa15.25■□□□□ 0.03
CDRT4-204ENST00000619038 CNGB1Q14028 1251 aaPredicted RBP15.24■□□□□ 0.03
CDRT4-204ENST00000619038 L1TD1Q5T7N2 865 aaKnown RBP15.23■□□□□ 0.03
CDRT4-204ENST00000619038 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
CDRT4-204ENST00000619038 EIF4G2P78344 907 aaKnown RBP eCLIP15.22■□□□□ 0.036e-8■■■■■ 42.7
CDRT4-204ENST00000619038 PDCL3Q9H2J4 239 aa15.22■□□□□ 0.03
CDRT4-204ENST00000619038 CCDC7Q96M83 1385 aa15.22■□□□□ 0.03
CDRT4-204ENST00000619038 BCL11BQ9C0K0 894 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms