RNA–Protein interactions for RNA: ENST00000616983.4

GYPA-212, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GYPA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-212ENST00000616983 IGSF3O75054 1194 aa9.35□□□□□ -0.91
GYPA-212ENST00000616983 HMGB1P09429 215 aaKnown RBP9.35□□□□□ -0.91
GYPA-212ENST00000616983 ARID3AQ99856 593 aa9.34□□□□□ -0.91
GYPA-212ENST00000616983 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
GYPA-212ENST00000616983 CDK11BP21127 795 aaKnown RBP9.32□□□□□ -0.92
GYPA-212ENST00000616983 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
GYPA-212ENST00000616983 CDK11AQ9UQ88 783 aaPredicted RBP9.32□□□□□ -0.92
GYPA-212ENST00000616983 SPDYE4A6NLX3 237 aa9.3□□□□□ -0.92
GYPA-212ENST00000616983 PLEKHG5O94827 1062 aa9.3□□□□□ -0.92
GYPA-212ENST00000616983 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
GYPA-212ENST00000616983 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
GYPA-212ENST00000616983 ATF5Q9Y2D1 282 aaPredicted RBP9.3□□□□□ -0.92
GYPA-212ENST00000616983 C1orf115Q9H7X2 142 aa9.3□□□□□ -0.92
GYPA-212ENST00000616983 HSP90B1P14625 803 aaKnown RBP9.28□□□□□ -0.92
GYPA-212ENST00000616983 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
GYPA-212ENST00000616983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.26□□□□□ -0.93
GYPA-212ENST00000616983 SPOCK2Q92563 424 aa9.26□□□□□ -0.93
GYPA-212ENST00000616983 ZNF219Q9P2Y4 722 aaPredicted RBP9.24□□□□□ -0.93
GYPA-212ENST00000616983 ABCB7O75027 752 aa9.22□□□□□ -0.93
GYPA-212ENST00000616983 PUS7Q96PZ0 661 aaKnown RBP9.21□□□□□ -0.94
GYPA-212ENST00000616983 CHMP4AQ9BY43 222 aa9.21□□□□□ -0.94
GYPA-212ENST00000616983 SAMD1Q6SPF0 538 aaPredicted RBP9.16□□□□□ -0.94
GYPA-212ENST00000616983 KCTD17Q8N5Z5 321 aa9.16□□□□□ -0.94
GYPA-212ENST00000616983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.15□□□□□ -0.94
GYPA-212ENST00000616983 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
GYPA-212ENST00000616983 HS6ST3Q8IZP7 471 aa9.14□□□□□ -0.95
GYPA-212ENST00000616983 RGS22Q8NE09 1264 aa9.14□□□□□ -0.95
GYPA-212ENST00000616983 RAD21O60216 631 aa9.12□□□□□ -0.95
GYPA-212ENST00000616983 P3H3Q8IVL6 736 aa9.11□□□□□ -0.95
GYPA-212ENST00000616983 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
GYPA-212ENST00000616983 APBB1O00213 710 aa9.1□□□□□ -0.95
GYPA-212ENST00000616983 RBM42Q9BTD8 480 aaKnown RBP9.1□□□□□ -0.95
GYPA-212ENST00000616983 SLC24A3Q9HC58 644 aa9.1□□□□□ -0.95
GYPA-212ENST00000616983 ZC3H15Q8WU90 426 aaKnown RBP9.09□□□□□ -0.95
GYPA-212ENST00000616983 GTPBP6O43824 516 aaPredicted RBP9.06□□□□□ -0.96
GYPA-212ENST00000616983 NKX1-1Q15270 411 aaPredicted RBP9.04□□□□□ -0.96
GYPA-212ENST00000616983 MTMR7Q9Y216 660 aa9.04□□□□□ -0.96
GYPA-212ENST00000616983 CHRDL2Q6WN34 429 aa9.03□□□□□ -0.96
GYPA-212ENST00000616983 TRAIPQ9BWF2 469 aa9.03□□□□□ -0.96
GYPA-212ENST00000616983 RBM25P49756 843 aaKnown RBP8.99□□□□□ -0.97
GYPA-212ENST00000616983 BRD2P25440 801 aaKnown RBP8.98□□□□□ -0.97
GYPA-212ENST00000616983 ZNF428Q96B54 188 aa8.98□□□□□ -0.97
GYPA-212ENST00000616983 KCNV2Q8TDN2 545 aa8.97□□□□□ -0.97
GYPA-212ENST00000616983 TMCO4Q5TGY1 634 aa8.97□□□□□ -0.97
GYPA-212ENST00000616983 CCDC82Q8N4S0 544 aa8.96□□□□□ -0.97
GYPA-212ENST00000616983 MKRN4PQ13434 485 aaPredicted RBP8.96□□□□□ -0.98
GYPA-212ENST00000616983 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
GYPA-212ENST00000616983 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
GYPA-212ENST00000616983 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
GYPA-212ENST00000616983 MFAP1P55081 439 aaKnown RBP8.94□□□□□ -0.98
GYPA-212ENST00000616983 UBE2Q2Q8WVN8 375 aa8.94□□□□□ -0.98
GYPA-212ENST00000616983 POLA2Q14181 598 aa8.92□□□□□ -0.98
GYPA-212ENST00000616983 AEBP1Q8IUX7 1158 aa8.92□□□□□ -0.98
GYPA-212ENST00000616983 IL27Q8NEV9 243 aa8.92□□□□□ -0.98
GYPA-212ENST00000616983 DHX37Q8IY37 1157 aaKnown RBP8.91□□□□□ -0.98
GYPA-212ENST00000616983 E9PSI1 815 aa8.9□□□□□ -0.98
GYPA-212ENST00000616983 ZMYND10O75800 440 aa8.9□□□□□ -0.98
GYPA-212ENST00000616983 SP7Q8TDD2 431 aaPredicted RBP8.89□□□□□ -0.99
GYPA-212ENST00000616983 GPBP1L1Q9HC44 474 aaPredicted RBP8.88□□□□□ -0.99
GYPA-212ENST00000616983 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
GYPA-212ENST00000616983 WDR70Q9NW82 654 aa8.87□□□□□ -0.99
GYPA-212ENST00000616983 GZF1Q9H116 711 aaPredicted RBP8.86□□□□□ -0.99
GYPA-212ENST00000616983 TRIM41Q8WV44 630 aa8.86□□□□□ -0.99
GYPA-212ENST00000616983 FLIIQ13045 1269 aa8.84□□□□□ -0.99
GYPA-212ENST00000616983 RNF25Q96BH1 459 aaPredicted RBP8.84□□□□□ -0.99
GYPA-212ENST00000616983 USP35Q9P2H5 1018 aa8.84□□□□□ -0.99
GYPA-212ENST00000616983 AKT1S1Q96B36 256 aa8.83□□□□□ -1
GYPA-212ENST00000616983 RSPH4AQ5TD94 716 aa8.82□□□□□ -1
GYPA-212ENST00000616983 TRAK2O60296 914 aa8.82□□□□□ -1
GYPA-212ENST00000616983 FAM177A1Q8N128 213 aaPredicted RBP8.82□□□□□ -1
GYPA-212ENST00000616983 POLR3GLQ9BT43 218 aa8.82□□□□□ -1
GYPA-212ENST00000616983 A6NJR5 290 aa8.81□□□□□ -1
GYPA-212ENST00000616983 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
GYPA-212ENST00000616983 BARGINQ6ZT62 677 aa8.8□□□□□ -1
GYPA-212ENST00000616983 PLCD3Q8N3E9 789 aa8.79□□□□□ -1
GYPA-212ENST00000616983 TESPA1A2RU30 521 aaPredicted RBP8.78□□□□□ -1
GYPA-212ENST00000616983 AK7Q96M32 723 aa8.77□□□□□ -1.01
GYPA-212ENST00000616983 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
GYPA-212ENST00000616983 FAM9AQ8IZU1 332 aaPredicted RBP8.75□□□□□ -1.01
GYPA-212ENST00000616983 RYDENQ9NUL5 291 aaKnown RBP8.75□□□□□ -1.01
GYPA-212ENST00000616983 PIP4P2Q8N4L2 257 aa8.75□□□□□ -1.01
GYPA-212ENST00000616983 STAG3Q9UJ98 1225 aa8.75□□□□□ -1.01
GYPA-212ENST00000616983 ARHGEF1Q92888 912 aaKnown RBP8.74□□□□□ -1.01
GYPA-212ENST00000616983 ZBTB12Q9Y330 459 aaPredicted RBP8.74□□□□□ -1.01
GYPA-212ENST00000616983 ONECUT3O60422 494 aaPredicted RBP8.74□□□□□ -1.01
GYPA-212ENST00000616983 TAF7LQ5H9L4 462 aa8.74□□□□□ -1.01
GYPA-212ENST00000616983 REM2Q8IYK8 340 aaPredicted RBP8.74□□□□□ -1.01
GYPA-212ENST00000616983 CLUAP1Q96AJ1 413 aa8.73□□□□□ -1.01
GYPA-212ENST00000616983 SEMA3EO15041 775 aa8.72□□□□□ -1.01
GYPA-212ENST00000616983 IRF5Q13568 498 aa8.72□□□□□ -1.01
GYPA-212ENST00000616983 RETREG2Q8NC44 543 aa8.72□□□□□ -1.01
GYPA-212ENST00000616983 FBXW7Q969H0 707 aa8.72□□□□□ -1.01
GYPA-212ENST00000616983 PDE4CQ08493 712 aa8.71□□□□□ -1.02
GYPA-212ENST00000616983 CADPS2Q86UW7 1296 aa8.7□□□□□ -1.02
GYPA-212ENST00000616983 STK25O00506 426 aa8.7□□□□□ -1.02
GYPA-212ENST00000616983 AMOTL2Q9Y2J4 779 aa8.7□□□□□ -1.02
GYPA-212ENST00000616983 SERPINA10Q9UK55 444 aa8.69□□□□□ -1.02
GYPA-212ENST00000616983 CCDC125Q86Z20 511 aa8.69□□□□□ -1.02
GYPA-212ENST00000616983 RIOK3O14730 519 aaKnown RBP8.68□□□□□ -1.02
GYPA-212ENST00000616983 HAX1O00165 279 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms