RNA–Protein interactions for RNA: ENST00000616691.1

MALAT1-209, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 587 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-209ENST00000616691 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
MALAT1-209ENST00000616691 FGD5Q6ZNL6 1462 aa12.07□□□□□ -0.48
MALAT1-209ENST00000616691 DSG3P32926 999 aa12.05□□□□□ -0.48
MALAT1-209ENST00000616691 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
MALAT1-209ENST00000616691 BIVM-ERCC5R4GMW8 1640 aa12.04□□□□□ -0.48
MALAT1-209ENST00000616691 SOGA1O94964 1423 aa12.03□□□□□ -0.48
MALAT1-209ENST00000616691 RAD54L2Q9Y4B4 1467 aa12.03□□□□□ -0.48
MALAT1-209ENST00000616691 ABCA10Q8WWZ4 1543 aa12.01□□□□□ -0.49
MALAT1-209ENST00000616691 TOP2BQ02880 1626 aa12.01□□□□□ -0.49
MALAT1-209ENST00000616691 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.49
MALAT1-209ENST00000616691 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
MALAT1-209ENST00000616691 ABCA5Q8WWZ7 1642 aa11.99□□□□□ -0.49
MALAT1-209ENST00000616691 SYNJ1O43426 1573 aa11.96□□□□□ -0.49
MALAT1-209ENST00000616691 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
MALAT1-209ENST00000616691 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
MALAT1-209ENST00000616691 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
MALAT1-209ENST00000616691 CHD1O14646 1710 aa11.94□□□□□ -0.5
MALAT1-209ENST00000616691 TDRD9Q8NDG6 1382 aaKnown RBP11.94□□□□□ -0.5
MALAT1-209ENST00000616691 ABCB7O75027 752 aa11.93□□□□□ -0.5
MALAT1-209ENST00000616691 PBRM1Q86U86 1689 aa11.92□□□□□ -0.5
MALAT1-209ENST00000616691 GAPVD1Q14C86 1478 aa11.91□□□□□ -0.5
MALAT1-209ENST00000616691 SNAPC4Q5SXM2 1469 aa11.91□□□□□ -0.5
MALAT1-209ENST00000616691 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
MALAT1-209ENST00000616691 SYNJ2O15056 1496 aa11.9□□□□□ -0.5
MALAT1-209ENST00000616691 POLA2Q14181 598 aa11.89□□□□□ -0.51
MALAT1-209ENST00000616691 RIMBP3CA6NJZ7 1639 aa11.88□□□□□ -0.51
MALAT1-209ENST00000616691 RIMBP3BA6NNM3 1639 aa11.88□□□□□ -0.51
MALAT1-209ENST00000616691 RIMBP3Q9UFD9 1639 aa11.88□□□□□ -0.51
MALAT1-209ENST00000616691 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
MALAT1-209ENST00000616691 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
MALAT1-209ENST00000616691 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
MALAT1-209ENST00000616691 NUP160Q12769 1436 aa11.82□□□□□ -0.52
MALAT1-209ENST00000616691 GRIN2AQ12879 1464 aa11.8□□□□□ -0.52
MALAT1-209ENST00000616691 FHAD1B1AJZ9 1412 aa11.79□□□□□ -0.52
MALAT1-209ENST00000616691 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
MALAT1-209ENST00000616691 SHROOM2Q13796 1616 aa11.77□□□□□ -0.53
MALAT1-209ENST00000616691 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
MALAT1-209ENST00000616691 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
MALAT1-209ENST00000616691 IGF1RP08069 1367 aa11.72□□□□□ -0.53
MALAT1-209ENST00000616691 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.53
MALAT1-209ENST00000616691 CUL7Q14999 1698 aa11.71□□□□□ -0.54
MALAT1-209ENST00000616691 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
MALAT1-209ENST00000616691 FBLN2P98095 1184 aa11.7□□□□□ -0.54
MALAT1-209ENST00000616691 RUSC2Q8N2Y8 1516 aa11.68□□□□□ -0.54
MALAT1-209ENST00000616691 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
MALAT1-209ENST00000616691 ERCC6L2Q5T890 1561 aa11.66□□□□□ -0.54
MALAT1-209ENST00000616691 KIAA0586Q9BVV6 1533 aa11.63□□□□□ -0.55
MALAT1-209ENST00000616691 CYB5RLQ6IPT4 315 aa11.62□□□□□ -0.55
MALAT1-209ENST00000616691 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
MALAT1-209ENST00000616691 CARMIL1Q5VZK9 1371 aa11.59□□□□□ -0.55
MALAT1-209ENST00000616691 PRG4Q92954 1404 aaPredicted RBP11.56□□□□□ -0.56
MALAT1-209ENST00000616691 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
MALAT1-209ENST00000616691 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
MALAT1-209ENST00000616691 RAPGEF2Q9Y4G8 1499 aa11.53□□□□□ -0.56
MALAT1-209ENST00000616691 UGGT2Q9NYU1 1516 aa11.51□□□□□ -0.57
MALAT1-209ENST00000616691 IQGAP2Q13576 1575 aa11.51□□□□□ -0.57
MALAT1-209ENST00000616691 DISP1Q96F81 1524 aa11.49□□□□□ -0.57
MALAT1-209ENST00000616691 ADCY10Q96PN6 1610 aa11.47□□□□□ -0.57
MALAT1-209ENST00000616691 MAPKBP1O60336 1514 aa11.47□□□□□ -0.57
MALAT1-209ENST00000616691 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
MALAT1-209ENST00000616691 UHRF1BP1LA0JNW5 1464 aa11.45□□□□□ -0.58
MALAT1-209ENST00000616691 EEA1Q15075 1411 aa11.45□□□□□ -0.58
MALAT1-209ENST00000616691 CTTNBP2Q8WZ74 1663 aa11.45□□□□□ -0.58
MALAT1-209ENST00000616691 TNIKQ9UKE5 1360 aa11.43□□□□□ -0.58
MALAT1-209ENST00000616691 KIF13AQ9H1H9 1805 aa11.43□□□□□ -0.58
MALAT1-209ENST00000616691 KIAA0556O60303 1618 aa11.42□□□□□ -0.58
MALAT1-209ENST00000616691 CARMIL2Q6F5E8 1435 aa11.42□□□□□ -0.58
MALAT1-209ENST00000616691 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
MALAT1-209ENST00000616691 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
MALAT1-209ENST00000616691 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
MALAT1-209ENST00000616691 ABCC10Q5T3U5 1492 aa11.39□□□□□ -0.59
MALAT1-209ENST00000616691 PTPRGP23470 1445 aa11.39□□□□□ -0.59
MALAT1-209ENST00000616691 ABCC2Q92887 1545 aa11.39□□□□□ -0.59
MALAT1-209ENST00000616691 KDM5BQ9UGL1 1544 aa11.39□□□□□ -0.59
MALAT1-209ENST00000616691 DIP2BQ9P265 1576 aa11.38□□□□□ -0.59
MALAT1-209ENST00000616691 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
MALAT1-209ENST00000616691 UACAQ9BZF9 1416 aa11.36□□□□□ -0.59
MALAT1-209ENST00000616691 KIF21BO75037 1637 aa11.36□□□□□ -0.59
MALAT1-209ENST00000616691 GOLGA3Q08378 1498 aa11.36□□□□□ -0.59
MALAT1-209ENST00000616691 ABCA8O94911 1581 aa11.35□□□□□ -0.59
MALAT1-209ENST00000616691 GLI2P10070 1586 aa11.35□□□□□ -0.59
MALAT1-209ENST00000616691 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
MALAT1-209ENST00000616691 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
MALAT1-209ENST00000616691 PLB1Q6P1J6 1458 aa11.31□□□□□ -0.6
MALAT1-209ENST00000616691 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
MALAT1-209ENST00000616691 ZCCHC11Q5TAX3 1644 aaKnown RBP11.29□□□□□ -0.6
MALAT1-209ENST00000616691 ASXL2Q76L83 1435 aa11.28□□□□□ -0.6
MALAT1-209ENST00000616691 PPRC1Q5VV67 1664 aaKnown RBP11.28□□□□□ -0.6
MALAT1-209ENST00000616691 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.61
MALAT1-209ENST00000616691 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
MALAT1-209ENST00000616691 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
MALAT1-209ENST00000616691 MAP3K4Q9Y6R4 1608 aa11.25□□□□□ -0.61
MALAT1-209ENST00000616691 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
MALAT1-209ENST00000616691 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
MALAT1-209ENST00000616691 WDR7Q9Y4E6 1490 aa11.22□□□□□ -0.61
MALAT1-209ENST00000616691 RAPGEF6Q8TEU7 1601 aa11.2□□□□□ -0.62
MALAT1-209ENST00000616691 ATP10BO94823 1461 aa11.2□□□□□ -0.62
MALAT1-209ENST00000616691 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
MALAT1-209ENST00000616691 CFAP43Q8NDM7 1665 aa11.19□□□□□ -0.62
MALAT1-209ENST00000616691 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms