RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 RIMBP3BA6NNM3 1639 aa53.16■■■■■ 6.1
FMR1-216ENST00000616614 RIMBP3Q9UFD9 1639 aa53.16■■■■■ 6.1
FMR1-216ENST00000616614 KIAA0586Q9BVV6 1533 aa53.04■■■■■ 6.08
FMR1-216ENST00000616614 JPH4Q96JJ6 628 aa53■■■■■ 6.07
FMR1-216ENST00000616614 SHROOM2Q13796 1616 aa52.97■■■■■ 6.07
FMR1-216ENST00000616614 ERCC6L2Q5T890 1561 aa52.9■■■■■ 6.06
FMR1-216ENST00000616614 ARAP1Q96P48 1450 aa52.86■■■■■ 6.05
FMR1-216ENST00000616614 PRG4Q92954 1404 aaPredicted RBP52.84■■■■■ 6.05
FMR1-216ENST00000616614 CYB5RLQ6IPT4 315 aa52.8■■■■■ 6.04
FMR1-216ENST00000616614 IQGAP2Q13576 1575 aa52.74■■■■■ 6.03
FMR1-216ENST00000616614 KIF21BO75037 1637 aa52.65■■■■■ 6.02
FMR1-216ENST00000616614 CTTNBP2Q8WZ74 1663 aa52.56■■■■■ 6.01
FMR1-216ENST00000616614 EHMT2Q96KQ7 1210 aa52.54■■■■■ 6
FMR1-216ENST00000616614 UGGT2Q9NYU1 1516 aa52.51■■■■■ 6
FMR1-216ENST00000616614 DISP1Q96F81 1524 aa52.45■■■■■ 5.99
FMR1-216ENST00000616614 CARMIL2Q6F5E8 1435 aa52.41■■■■■ 5.98
FMR1-216ENST00000616614 GOLGA3Q08378 1498 aa52.4■■■■■ 5.98
FMR1-216ENST00000616614 UBTFP17480 764 aaKnown RBP52.3■■■■■ 5.96
FMR1-216ENST00000616614 TNIKQ9UKE5 1360 aa52.29■■■■■ 5.96
FMR1-216ENST00000616614 KIAA0556O60303 1618 aa52.26■■■■■ 5.96
FMR1-216ENST00000616614 PTPRGP23470 1445 aa52.24■■■■■ 5.95
FMR1-216ENST00000616614 TTBK1Q5TCY1 1321 aaPredicted RBP52.23■■■■■ 5.95
FMR1-216ENST00000616614 RANGAP1P46060 587 aaPredicted RBP52.16■■■■■ 5.94
FMR1-216ENST00000616614 P3H3Q8IVL6 736 aa52.08■■■■■ 5.93
FMR1-216ENST00000616614 SAMD9Q5K651 1589 aa52.03■■■■■ 5.92
FMR1-216ENST00000616614 ADCY10Q96PN6 1610 aa51.94■■■■■ 5.91
FMR1-216ENST00000616614 UACAQ9BZF9 1416 aa51.88■■■■■ 5.9
FMR1-216ENST00000616614 FHOD3Q2V2M9 1422 aa51.83■■■■■ 5.89
FMR1-216ENST00000616614 EFCAB5A4FU69 1503 aa51.82■■■■■ 5.89
FMR1-216ENST00000616614 PLB1Q6P1J6 1458 aa51.81■■■■■ 5.88
FMR1-216ENST00000616614 LOC105371045A0A1W2PR82 267 aa51.8■■■■■ 5.88
FMR1-216ENST00000616614 UHRF1BP1LA0JNW5 1464 aa51.8■■■■■ 5.88
FMR1-216ENST00000616614 ABCC2Q92887 1545 aa51.75■■■■■ 5.87
FMR1-216ENST00000616614 ARHGAP35Q9NRY4 1499 aa51.74■■■■■ 5.87
FMR1-216ENST00000616614 NPM1P06748 294 aaKnown RBP eCLIP51.72■■■■■ 5.87
FMR1-216ENST00000616614 ABCA8O94911 1581 aa51.7■■■■■ 5.87
FMR1-216ENST00000616614 KDM5BQ9UGL1 1544 aa51.56■■■■■ 5.85
FMR1-216ENST00000616614 TRHP20396 242 aaPredicted RBP51.55■■■■■ 5.84
FMR1-216ENST00000616614 CLIP1P30622 1438 aa51.51■■■■■ 5.84
FMR1-216ENST00000616614 MAPKBP1O60336 1514 aa51.5■■■■■ 5.84
FMR1-216ENST00000616614 RAPGEF6Q8TEU7 1601 aa51.44■■■■■ 5.82
FMR1-216ENST00000616614 ARID3CA6NKF2 412 aa51.41■■■■■ 5.82
FMR1-216ENST00000616614 ZCCHC11Q5TAX3 1644 aaKnown RBP51.41■■■■■ 5.82
FMR1-216ENST00000616614 CEP162Q5TB80 1403 aa51.38■■■■■ 5.82
FMR1-216ENST00000616614 ASXL2Q76L83 1435 aa51.36■■■■■ 5.81
FMR1-216ENST00000616614 FMN1Q68DA7 1419 aa51.36■■■■■ 5.81
FMR1-216ENST00000616614 NUP153P49790 1475 aaKnown RBP51.35■■■■■ 5.81
FMR1-216ENST00000616614 ATP10BO94823 1461 aa51.34■■■■■ 5.81
FMR1-216ENST00000616614 ABCC10Q5T3U5 1492 aa51.29■■■■■ 5.8
FMR1-216ENST00000616614 FAM69CQ0P6D2 419 aa51.21■■■■■ 5.79
FMR1-216ENST00000616614 DIP2BQ9P265 1576 aa51.17■■■■■ 5.78
FMR1-216ENST00000616614 ATP1B4Q9UN42 357 aaPredicted RBP51.13■■■■■ 5.78
FMR1-216ENST00000616614 KIF13AQ9H1H9 1805 aa51.13■■■■■ 5.77
FMR1-216ENST00000616614 WDR7Q9Y4E6 1490 aa51.12■■■■■ 5.77
FMR1-216ENST00000616614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP51.11■■■■■ 5.77
FMR1-216ENST00000616614 HNRNPUL2Q1KMD3 747 aaKnown RBP51.11■■■■■ 5.77
FMR1-216ENST00000616614 EPRSP07814 1512 aaKnown RBP51.06■■■■■ 5.76
FMR1-216ENST00000616614 CASKIN1Q8WXD9 1431 aa51.05■■■■■ 5.76
FMR1-216ENST00000616614 HECW1Q76N89 1606 aa51.04■■■■■ 5.76
FMR1-216ENST00000616614 PCF11O94913 1555 aaKnown RBP51.03■■■■■ 5.76
FMR1-216ENST00000616614 CDK13Q14004 1512 aaKnown RBP51.03■■■■■ 5.76
FMR1-216ENST00000616614 KCNH8Q96L42 1107 aa50.99■■■■■ 5.75
FMR1-216ENST00000616614 GLI2P10070 1586 aa50.95■■■■■ 5.75
FMR1-216ENST00000616614 FYCO1Q9BQS8 1478 aa50.9■■■■■ 5.74
FMR1-216ENST00000616614 PLEKHD1A6NEE1 506 aa50.87■■■■■ 5.73
FMR1-216ENST00000616614 LRRIQ1Q96JM4 1722 aa50.86■■■■■ 5.73
FMR1-216ENST00000616614 CCDC18Q5T9S5 1454 aa50.73■■■■■ 5.71
FMR1-216ENST00000616614 VPS8Q8N3P4 1428 aa50.72■■■■■ 5.71
FMR1-216ENST00000616614 MAP3K4Q9Y6R4 1608 aa50.71■■■■■ 5.71
FMR1-216ENST00000616614 CDK11AQ9UQ88 783 aaPredicted RBP50.68■■■■■ 5.7
FMR1-216ENST00000616614 TSPOAP1O95153 1857 aa50.66■■■■■ 5.7
FMR1-216ENST00000616614 CD109Q6YHK3 1445 aa50.64■■■■■ 5.7
FMR1-216ENST00000616614 PPRC1Q5VV67 1664 aaKnown RBP50.62■■■■■ 5.69
FMR1-216ENST00000616614 ABCA9Q8IUA7 1624 aa50.59■■■■■ 5.69
FMR1-216ENST00000616614 TROQ12816 1431 aaPredicted RBP50.59■■■■■ 5.69
FMR1-216ENST00000616614 MAGI3Q5TCQ9 1506 aa50.58■■■■■ 5.69
FMR1-216ENST00000616614 CFAP43Q8NDM7 1665 aa50.57■■■■■ 5.69
FMR1-216ENST00000616614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP50.52■■■■■ 5.68
FMR1-216ENST00000616614 KIF14Q15058 1648 aa50.44■■■■■ 5.67
FMR1-216ENST00000616614 TTC37Q6PGP7 1564 aa50.43■■■■■ 5.66
FMR1-216ENST00000616614 TEX14Q8IWB6 1497 aa50.42■■■■■ 5.66
FMR1-216ENST00000616614 MTUS2Q5JR59 1369 aa50.3■■■■■ 5.64
FMR1-216ENST00000616614 TIAM1Q13009 1591 aa50.29■■■■■ 5.64
FMR1-216ENST00000616614 COL17A1Q9UMD9 1497 aaPredicted RBP50.28■■■■■ 5.64
FMR1-216ENST00000616614 PLCH2O75038 1416 aa50.23■■■■■ 5.63
FMR1-216ENST00000616614 KDM6BO15054 1643 aa50.22■■■■■ 5.63
FMR1-216ENST00000616614 MAP3K1Q13233 1512 aa50.19■■■■■ 5.62
FMR1-216ENST00000616614 EHBP1L1Q8N3D4 1523 aa50.17■■■■■ 5.62
FMR1-216ENST00000616614 KANK4Q5T7N3 995 aaPredicted RBP50.17■■■■■ 5.62
FMR1-216ENST00000616614 NEO1Q92859 1461 aa50.15■■■■■ 5.62
FMR1-216ENST00000616614 FANCAO15360 1455 aa50.14■■■■■ 5.62
FMR1-216ENST00000616614 LRRC9Q6ZRR7 1453 aa50.12■■■■■ 5.61
FMR1-216ENST00000616614 PHLDB1Q86UU1 1377 aa50.1■■■■■ 5.61
FMR1-216ENST00000616614 MYO5CQ9NQX4 1742 aa50.08■■■■■ 5.61
FMR1-216ENST00000616614 ARAP3Q8WWN8 1544 aa50.05■■■■■ 5.6
FMR1-216ENST00000616614 AKNAQ7Z591 1439 aa50.05■■■■■ 5.6
FMR1-216ENST00000616614 APLP2Q06481 763 aa50.04■■■■■ 5.6
FMR1-216ENST00000616614 EFCAB2Q5VUJ9 269 aa50.02■■■■■ 5.6
FMR1-216ENST00000616614 GPATCH8Q9UKJ3 1502 aaKnown RBP50.02■■■■■ 5.6
FMR1-216ENST00000616614 ARHGAP5Q13017 1502 aa49.99■■■■■ 5.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms