RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
PPP4R3B-204ENST00000612688 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
PPP4R3B-204ENST00000612688 ERICH3Q5RHP9 1530 aa17.64■□□□□ 0.41
PPP4R3B-204ENST00000612688 APLP2Q06481 763 aa17.63■□□□□ 0.41
PPP4R3B-204ENST00000612688 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
PPP4R3B-204ENST00000612688 WDR62O43379 1518 aa17.61■□□□□ 0.41
PPP4R3B-204ENST00000612688 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
PPP4R3B-204ENST00000612688 IFT140Q96RY7 1462 aa17.57■□□□□ 0.4
PPP4R3B-204ENST00000612688 THOC2Q8NI27 1593 aaKnown RBP17.56■□□□□ 0.4
PPP4R3B-204ENST00000612688 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
PPP4R3B-204ENST00000612688 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
PPP4R3B-204ENST00000612688 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
PPP4R3B-204ENST00000612688 ARAP1Q96P48 1450 aa17.52■□□□□ 0.4
PPP4R3B-204ENST00000612688 VPS8Q8N3P4 1428 aa17.51■□□□□ 0.39
PPP4R3B-204ENST00000612688 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
PPP4R3B-204ENST00000612688 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
PPP4R3B-204ENST00000612688 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
PPP4R3B-204ENST00000612688 ARID3CA6NKF2 412 aa17.46■□□□□ 0.39
PPP4R3B-204ENST00000612688 CUL7Q14999 1698 aa17.46■□□□□ 0.39
PPP4R3B-204ENST00000612688 FHOD3Q2V2M9 1422 aa17.46■□□□□ 0.39
PPP4R3B-204ENST00000612688 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
PPP4R3B-204ENST00000612688 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
PPP4R3B-204ENST00000612688 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
PPP4R3B-204ENST00000612688 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
PPP4R3B-204ENST00000612688 MIER1Q8N108 512 aa17.39■□□□□ 0.37
PPP4R3B-204ENST00000612688 ZNF316A6NFI3 1004 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3B-204ENST00000612688 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
PPP4R3B-204ENST00000612688 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
PPP4R3B-204ENST00000612688 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
PPP4R3B-204ENST00000612688 CTTNBP2Q8WZ74 1663 aa17.31■□□□□ 0.36
PPP4R3B-204ENST00000612688 ITGAEP38570 1179 aa17.3■□□□□ 0.36
PPP4R3B-204ENST00000612688 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
PPP4R3B-204ENST00000612688 SYNJ2O15056 1496 aa17.27■□□□□ 0.35
PPP4R3B-204ENST00000612688 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
PPP4R3B-204ENST00000612688 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
PPP4R3B-204ENST00000612688 PCF11O94913 1555 aaKnown RBP17.2■□□□□ 0.34
PPP4R3B-204ENST00000612688 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
PPP4R3B-204ENST00000612688 EFCAB5A4FU69 1503 aa17.19■□□□□ 0.34
PPP4R3B-204ENST00000612688 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
PPP4R3B-204ENST00000612688 CEP170Q5SW79 1584 aa17.18■□□□□ 0.34
PPP4R3B-204ENST00000612688 FAM50AQ14320 339 aaKnown RBP17.16■□□□□ 0.34
PPP4R3B-204ENST00000612688 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
PPP4R3B-204ENST00000612688 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
PPP4R3B-204ENST00000612688 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
PPP4R3B-204ENST00000612688 BCANQ96GW7 911 aa17.11■□□□□ 0.33
PPP4R3B-204ENST00000612688 TIAM1Q13009 1591 aa17.1■□□□□ 0.33
PPP4R3B-204ENST00000612688 DISP1Q96F81 1524 aa17.1■□□□□ 0.33
PPP4R3B-204ENST00000612688 NUP160Q12769 1436 aa17.1■□□□□ 0.33
PPP4R3B-204ENST00000612688 ANP32EQ9BTT0 268 aa17.09■□□□□ 0.33
PPP4R3B-204ENST00000612688 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
PPP4R3B-204ENST00000612688 FYCO1Q9BQS8 1478 aa17.09■□□□□ 0.33
PPP4R3B-204ENST00000612688 CHD1O14646 1710 aa17.07■□□□□ 0.32
PPP4R3B-204ENST00000612688 UGGT2Q9NYU1 1516 aa17.07■□□□□ 0.32
PPP4R3B-204ENST00000612688 PHLDB1Q86UU1 1377 aa17.07■□□□□ 0.32
PPP4R3B-204ENST00000612688 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
PPP4R3B-204ENST00000612688 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
PPP4R3B-204ENST00000612688 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
PPP4R3B-204ENST00000612688 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
PPP4R3B-204ENST00000612688 PLB1Q6P1J6 1458 aa17.04■□□□□ 0.32
PPP4R3B-204ENST00000612688 KIAA0556O60303 1618 aa17.04■□□□□ 0.32
PPP4R3B-204ENST00000612688 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.32
PPP4R3B-204ENST00000612688 TSHZ2Q9NRE2 1034 aa17.02■□□□□ 0.31
PPP4R3B-204ENST00000612688 PTPRGP23470 1445 aa16.98■□□□□ 0.31
PPP4R3B-204ENST00000612688 EPRSP07814 1512 aaKnown RBP16.97■□□□□ 0.31
PPP4R3B-204ENST00000612688 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
PPP4R3B-204ENST00000612688 LRRIQ1Q96JM4 1722 aa16.96■□□□□ 0.31
PPP4R3B-204ENST00000612688 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
PPP4R3B-204ENST00000612688 MAP3K1Q13233 1512 aa16.94■□□□□ 0.3
PPP4R3B-204ENST00000612688 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
PPP4R3B-204ENST00000612688 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
PPP4R3B-204ENST00000612688 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
PPP4R3B-204ENST00000612688 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
PPP4R3B-204ENST00000612688 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
PPP4R3B-204ENST00000612688 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
PPP4R3B-204ENST00000612688 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
PPP4R3B-204ENST00000612688 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
PPP4R3B-204ENST00000612688 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
PPP4R3B-204ENST00000612688 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
PPP4R3B-204ENST00000612688 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.3
PPP4R3B-204ENST00000612688 HIRIP3Q9BW71 556 aaPredicted RBP16.89■□□□□ 0.3
PPP4R3B-204ENST00000612688 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
PPP4R3B-204ENST00000612688 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
PPP4R3B-204ENST00000612688 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
PPP4R3B-204ENST00000612688 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
PPP4R3B-204ENST00000612688 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
PPP4R3B-204ENST00000612688 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
PPP4R3B-204ENST00000612688 EHBP1L1Q8N3D4 1523 aa16.83■□□□□ 0.28
PPP4R3B-204ENST00000612688 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
PPP4R3B-204ENST00000612688 MYOM3Q5VTT5 1437 aa16.82■□□□□ 0.28
PPP4R3B-204ENST00000612688 ATP10BO94823 1461 aa16.81■□□□□ 0.28
PPP4R3B-204ENST00000612688 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
PPP4R3B-204ENST00000612688 SUPT6HQ7KZ85 1726 aaKnown RBP16.8■□□□□ 0.28
PPP4R3B-204ENST00000612688 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
PPP4R3B-204ENST00000612688 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.27
PPP4R3B-204ENST00000612688 SIN3AQ96ST3 1273 aa16.77■□□□□ 0.27
PPP4R3B-204ENST00000612688 CLASP1Q7Z460 1538 aa16.77■□□□□ 0.27
PPP4R3B-204ENST00000612688 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
PPP4R3B-204ENST00000612688 ABCA8O94911 1581 aa16.75■□□□□ 0.27
PPP4R3B-204ENST00000612688 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
PPP4R3B-204ENST00000612688 PTPRKQ15262 1439 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms