RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 CHMP7Q8WUX9 453 aaPredicted RBP12.78□□□□□ -0.36
SRGAP2B-204ENST00000612199 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.36
SRGAP2B-204ENST00000612199 SALL2Q9Y467 1007 aaPredicted RBP12.77□□□□□ -0.36
SRGAP2B-204ENST00000612199 FKBP8Q14318 412 aa12.77□□□□□ -0.37
SRGAP2B-204ENST00000612199 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.37
SRGAP2B-204ENST00000612199 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
SRGAP2B-204ENST00000612199 KDM2AQ9Y2K7 1162 aa12.75□□□□□ -0.37
SRGAP2B-204ENST00000612199 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRGAP2B-204ENST00000612199 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
SRGAP2B-204ENST00000612199 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
SRGAP2B-204ENST00000612199 RRP7BPQ9NSQ0 103 aa12.73□□□□□ -0.37
SRGAP2B-204ENST00000612199 PDE4CQ08493 712 aa12.72□□□□□ -0.37
SRGAP2B-204ENST00000612199 TSPY4P0CV99 314 aa12.71□□□□□ -0.38
SRGAP2B-204ENST00000612199 TSPY10P0CW01 314 aa12.71□□□□□ -0.38
SRGAP2B-204ENST00000612199 CEP162Q5TB80 1403 aa12.7□□□□□ -0.38
SRGAP2B-204ENST00000612199 WRNQ14191 1432 aaPredicted RBP eCLIP12.69□□□□□ -0.38
SRGAP2B-204ENST00000612199 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
SRGAP2B-204ENST00000612199 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
SRGAP2B-204ENST00000612199 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
SRGAP2B-204ENST00000612199 EEA1Q15075 1411 aa12.67□□□□□ -0.38
SRGAP2B-204ENST00000612199 MIER1Q8N108 512 aa12.66□□□□□ -0.38
SRGAP2B-204ENST00000612199 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
SRGAP2B-204ENST00000612199 NBR1Q14596 966 aa12.65□□□□□ -0.38
SRGAP2B-204ENST00000612199 ANP32AP39687 249 aaKnown RBP12.65□□□□□ -0.38
SRGAP2B-204ENST00000612199 NACADO15069 1562 aa12.65□□□□□ -0.38
SRGAP2B-204ENST00000612199 GOLGA3Q08378 1498 aa12.64□□□□□ -0.39
SRGAP2B-204ENST00000612199 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
SRGAP2B-204ENST00000612199 AEBP2Q6ZN18 517 aaPredicted RBP12.62□□□□□ -0.39
SRGAP2B-204ENST00000612199 TMC1Q8TDI8 760 aa12.62□□□□□ -0.39
SRGAP2B-204ENST00000612199 SENP3-EIF4A1A0A087X0R7 540 aa12.62□□□□□ -0.39
SRGAP2B-204ENST00000612199 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
SRGAP2B-204ENST00000612199 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
SRGAP2B-204ENST00000612199 MRS2Q9HD23 443 aa12.6□□□□□ -0.39
SRGAP2B-204ENST00000612199 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
SRGAP2B-204ENST00000612199 IRX6P78412 446 aaPredicted RBP12.58□□□□□ -0.4
SRGAP2B-204ENST00000612199 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
SRGAP2B-204ENST00000612199 WDR70Q9NW82 654 aa12.57□□□□□ -0.4
SRGAP2B-204ENST00000612199 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
SRGAP2B-204ENST00000612199 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
SRGAP2B-204ENST00000612199 WWC1Q8IX03 1113 aa12.55□□□□□ -0.4
SRGAP2B-204ENST00000612199 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
SRGAP2B-204ENST00000612199 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
SRGAP2B-204ENST00000612199 SOGA1O94964 1423 aa12.54□□□□□ -0.4
SRGAP2B-204ENST00000612199 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
SRGAP2B-204ENST00000612199 BAZ1AQ9NRL2 1556 aaPredicted RBP12.53□□□□□ -0.4
SRGAP2B-204ENST00000612199 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.41
SRGAP2B-204ENST00000612199 CEP164Q9UPV0 1460 aa12.52□□□□□ -0.41
SRGAP2B-204ENST00000612199 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRGAP2B-204ENST00000612199 ARID4BQ4LE39 1312 aaPredicted RBP12.5□□□□□ -0.41
SRGAP2B-204ENST00000612199 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
SRGAP2B-204ENST00000612199 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
SRGAP2B-204ENST00000612199 TRIM44Q96DX7 344 aaPredicted RBP12.49□□□□□ -0.41
SRGAP2B-204ENST00000612199 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
SRGAP2B-204ENST00000612199 CCDC136Q96JN2 1154 aa12.49□□□□□ -0.41
SRGAP2B-204ENST00000612199 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.47□□□□□ -0.41
SRGAP2B-204ENST00000612199 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
SRGAP2B-204ENST00000612199 UPF2Q9HAU5 1272 aaKnown RBP12.46□□□□□ -0.41
SRGAP2B-204ENST00000612199 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.42
SRGAP2B-204ENST00000612199 NAP1L2Q9ULW6 460 aaPredicted RBP12.45□□□□□ -0.42
SRGAP2B-204ENST00000612199 ERCC6Q03468 1493 aa12.45□□□□□ -0.42
SRGAP2B-204ENST00000612199 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
SRGAP2B-204ENST00000612199 ZRSR1Q15695 479 aaKnown RBP12.44□□□□□ -0.42
SRGAP2B-204ENST00000612199 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
SRGAP2B-204ENST00000612199 CUX2O14529 1486 aa12.43□□□□□ -0.42
SRGAP2B-204ENST00000612199 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
SRGAP2B-204ENST00000612199 PPP1R15AO75807 674 aaPredicted RBP12.42□□□□□ -0.42
SRGAP2B-204ENST00000612199 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
SRGAP2B-204ENST00000612199 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
SRGAP2B-204ENST00000612199 CARD11Q9BXL7 1154 aa12.4□□□□□ -0.42
SRGAP2B-204ENST00000612199 EIF4G1Q04637 1599 aaKnown RBP12.39□□□□□ -0.43
SRGAP2B-204ENST00000612199 KANK4Q5T7N3 995 aaPredicted RBP12.38□□□□□ -0.43
SRGAP2B-204ENST00000612199 G3V3G9 751 aa12.37□□□□□ -0.43
SRGAP2B-204ENST00000612199 DCAF8Q5TAQ9 597 aa12.37□□□□□ -0.43
SRGAP2B-204ENST00000612199 TMX4Q9H1E5 349 aaPredicted RBP12.37□□□□□ -0.43
SRGAP2B-204ENST00000612199 CCNB3Q8WWL7 1395 aa12.37□□□□□ -0.43
SRGAP2B-204ENST00000612199 PPM1GO15355 546 aaPredicted RBP12.36□□□□□ -0.43
SRGAP2B-204ENST00000612199 AK7Q96M32 723 aa12.33□□□□□ -0.44
SRGAP2B-204ENST00000612199 TDRD9Q8NDG6 1382 aaKnown RBP12.33□□□□□ -0.44
SRGAP2B-204ENST00000612199 FOXD1Q16676 465 aa12.33□□□□□ -0.44
SRGAP2B-204ENST00000612199 SUPT16HQ9Y5B9 1047 aaKnown RBP12.33□□□□□ -0.44
SRGAP2B-204ENST00000612199 KNSTRNQ9Y448 316 aa12.32□□□□□ -0.44
SRGAP2B-204ENST00000612199 TNNT2P45379 298 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2B-204ENST00000612199 NOC3LQ8WTT2 800 aaKnown RBP12.32□□□□□ -0.44
SRGAP2B-204ENST00000612199 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
SRGAP2B-204ENST00000612199 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
SRGAP2B-204ENST00000612199 CDCA8Q53HL2 280 aa12.31□□□□□ -0.44
SRGAP2B-204ENST00000612199 PPM1FP49593 454 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2B-204ENST00000612199 FHAD1B1AJZ9 1412 aa12.31□□□□□ -0.44
SRGAP2B-204ENST00000612199 DCAF11Q8TEB1 546 aa12.3□□□□□ -0.44
SRGAP2B-204ENST00000612199 WIZO95785 1651 aa12.3□□□□□ -0.44
SRGAP2B-204ENST00000612199 MSH5O43196 834 aa12.3□□□□□ -0.44
SRGAP2B-204ENST00000612199 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
SRGAP2B-204ENST00000612199 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
SRGAP2B-204ENST00000612199 NCLP19338 710 aaKnown RBP12.27□□□□□ -0.44
SRGAP2B-204ENST00000612199 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
SRGAP2B-204ENST00000612199 PLCB2Q00722 1185 aa12.27□□□□□ -0.45
SRGAP2B-204ENST00000612199 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
SRGAP2B-204ENST00000612199 MLECQ14165 292 aa12.27□□□□□ -0.45
SRGAP2B-204ENST00000612199 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
SRGAP2B-204ENST00000612199 VPS53Q5VIR6 699 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms