RNA–Protein interactions for RNA: ENST00000612023.1

LINC02139-201, Transcript of long intergenic non-protein coding RNA 2139, humanhuman

TSL 1 (best) BASIC

Gene LINC02139, Length 2,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02139-201ENST00000612023 RIMBP3BA6NNM3 1639 aa17.8■□□□□ 0.44
LINC02139-201ENST00000612023 RIMBP3Q9UFD9 1639 aa17.8■□□□□ 0.44
LINC02139-201ENST00000612023 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
LINC02139-201ENST00000612023 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
LINC02139-201ENST00000612023 RANGAP1P46060 587 aaPredicted RBP17.77■□□□□ 0.44
LINC02139-201ENST00000612023 C14orf37Q86TY3 774 aa17.77■□□□□ 0.44
LINC02139-201ENST00000612023 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.75■□□□□ 0.43
LINC02139-201ENST00000612023 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
LINC02139-201ENST00000612023 BBXQ8WY36 941 aaPredicted RBP17.73■□□□□ 0.43
LINC02139-201ENST00000612023 PODXL2Q9NZ53 605 aa17.73■□□□□ 0.43
LINC02139-201ENST00000612023 FBXO3Q9UK99 471 aa17.71■□□□□ 0.42
LINC02139-201ENST00000612023 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
LINC02139-201ENST00000612023 TSHZ2Q9NRE2 1034 aa17.67■□□□□ 0.42
LINC02139-201ENST00000612023 ARHGEF11O15085 1522 aa17.66■□□□□ 0.42
LINC02139-201ENST00000612023 IFNLR1Q8IU57 520 aaPredicted RBP17.63■□□□□ 0.41
LINC02139-201ENST00000612023 VASPP50552 380 aaPredicted RBP17.61■□□□□ 0.41
LINC02139-201ENST00000612023 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
LINC02139-201ENST00000612023 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
LINC02139-201ENST00000612023 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
LINC02139-201ENST00000612023 NBR1Q14596 966 aa17.59■□□□□ 0.41
LINC02139-201ENST00000612023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC02139-201ENST00000612023 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
LINC02139-201ENST00000612023 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
LINC02139-201ENST00000612023 ATF5Q9Y2D1 282 aaPredicted RBP17.51■□□□□ 0.39
LINC02139-201ENST00000612023 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
LINC02139-201ENST00000612023 CUX1P39880 1505 aa17.47■□□□□ 0.39
LINC02139-201ENST00000612023 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
LINC02139-201ENST00000612023 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
LINC02139-201ENST00000612023 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
LINC02139-201ENST00000612023 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
LINC02139-201ENST00000612023 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
LINC02139-201ENST00000612023 SPRYD3Q8NCJ5 442 aa17.4■□□□□ 0.38
LINC02139-201ENST00000612023 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.38
LINC02139-201ENST00000612023 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
LINC02139-201ENST00000612023 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
LINC02139-201ENST00000612023 LOC105371045A0A1W2PR82 267 aa17.38■□□□□ 0.37
LINC02139-201ENST00000612023 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
LINC02139-201ENST00000612023 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
LINC02139-201ENST00000612023 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
LINC02139-201ENST00000612023 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
LINC02139-201ENST00000612023 SOGA1O94964 1423 aa17.32■□□□□ 0.36
LINC02139-201ENST00000612023 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
LINC02139-201ENST00000612023 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
LINC02139-201ENST00000612023 RAD54L2Q9Y4B4 1467 aa17.29■□□□□ 0.36
LINC02139-201ENST00000612023 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
LINC02139-201ENST00000612023 CHD1O14646 1710 aa17.26■□□□□ 0.35
LINC02139-201ENST00000612023 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
LINC02139-201ENST00000612023 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
LINC02139-201ENST00000612023 PROM2Q8N271 834 aa17.23■□□□□ 0.35
LINC02139-201ENST00000612023 ECM2O94769 699 aaPredicted RBP17.22■□□□□ 0.35
LINC02139-201ENST00000612023 NPM2Q86SE8 214 aaKnown RBP17.22■□□□□ 0.35
LINC02139-201ENST00000612023 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
LINC02139-201ENST00000612023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
LINC02139-201ENST00000612023 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
LINC02139-201ENST00000612023 TRIM26Q12899 539 aaPredicted RBP17.2■□□□□ 0.34
LINC02139-201ENST00000612023 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
LINC02139-201ENST00000612023 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC02139-201ENST00000612023 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
LINC02139-201ENST00000612023 TDRD9Q8NDG6 1382 aaKnown RBP17.16■□□□□ 0.34
LINC02139-201ENST00000612023 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
LINC02139-201ENST00000612023 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
LINC02139-201ENST00000612023 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
LINC02139-201ENST00000612023 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
LINC02139-201ENST00000612023 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
LINC02139-201ENST00000612023 RGL2O15211 777 aa17.12■□□□□ 0.33
LINC02139-201ENST00000612023 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.33
LINC02139-201ENST00000612023 MAGI1Q96QZ7 1491 aaPredicted RBP17.08■□□□□ 0.32
LINC02139-201ENST00000612023 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
LINC02139-201ENST00000612023 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
LINC02139-201ENST00000612023 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
LINC02139-201ENST00000612023 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
LINC02139-201ENST00000612023 ILDR1Q86SU0 546 aaPredicted RBP17.06■□□□□ 0.32
LINC02139-201ENST00000612023 HRCP23327 699 aa17.03■□□□□ 0.32
LINC02139-201ENST00000612023 ADAMTS12P58397 1594 aa16.99■□□□□ 0.31
LINC02139-201ENST00000612023 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
LINC02139-201ENST00000612023 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
LINC02139-201ENST00000612023 CUL7Q14999 1698 aa16.98■□□□□ 0.31
LINC02139-201ENST00000612023 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
LINC02139-201ENST00000612023 APLP2Q06481 763 aa16.94■□□□□ 0.3
LINC02139-201ENST00000612023 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
LINC02139-201ENST00000612023 IGF1RP08069 1367 aa16.92■□□□□ 0.3
LINC02139-201ENST00000612023 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
LINC02139-201ENST00000612023 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
LINC02139-201ENST00000612023 SPOCK2Q92563 424 aa16.89■□□□□ 0.29
LINC02139-201ENST00000612023 EEA1Q15075 1411 aa16.89■□□□□ 0.29
LINC02139-201ENST00000612023 BRPF1P55201 1214 aaPredicted RBP16.87■□□□□ 0.29
LINC02139-201ENST00000612023 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
LINC02139-201ENST00000612023 NUP160Q12769 1436 aa16.81■□□□□ 0.28
LINC02139-201ENST00000612023 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
LINC02139-201ENST00000612023 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
LINC02139-201ENST00000612023 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
LINC02139-201ENST00000612023 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
LINC02139-201ENST00000612023 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
LINC02139-201ENST00000612023 KIF13AQ9H1H9 1805 aa16.78■□□□□ 0.28
LINC02139-201ENST00000612023 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.27
LINC02139-201ENST00000612023 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
LINC02139-201ENST00000612023 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
LINC02139-201ENST00000612023 KDM4FA0A1W2PPD8 638 aa16.72■□□□□ 0.27
LINC02139-201ENST00000612023 KIF21BO75037 1637 aa16.7■□□□□ 0.26
LINC02139-201ENST00000612023 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms