RNA–Protein interactions for RNA: ENST00000611174.4

CENPE-208, Transcript of centromere protein E, humanhuman

TSL 5 BASIC

Gene CENPE, Length 8,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-208ENST00000611174 STAG3Q9UJ98 1225 aa6.41□□□□□ -1.38
CENPE-208ENST00000611174 PLEKHD1A6NEE1 506 aa6.41□□□□□ -1.38
CENPE-208ENST00000611174 CFDP1Q9UEE9 299 aaPredicted RBP6.41□□□□□ -1.38
CENPE-208ENST00000611174 SUPT16HQ9Y5B9 1047 aaKnown RBP6.41□□□□□ -1.38
CENPE-208ENST00000611174 GOLGA3Q08378 1498 aa6.4□□□□□ -1.38
CENPE-208ENST00000611174 PLEKHG5O94827 1062 aa6.4□□□□□ -1.39
CENPE-208ENST00000611174 ANP32AP39687 249 aaKnown RBP6.4□□□□□ -1.39
CENPE-208ENST00000611174 NEFMP07197 916 aa6.39□□□□□ -1.39
CENPE-208ENST00000611174 ZBTB47Q9UFB7 747 aaPredicted RBP6.39□□□□□ -1.39
CENPE-208ENST00000611174 EEA1Q15075 1411 aa6.39□□□□□ -1.39
CENPE-208ENST00000611174 FOXD1Q16676 465 aa6.39□□□□□ -1.39
CENPE-208ENST00000611174 ESF1Q9H501 851 aaKnown RBP6.38□□□□□ -1.39
CENPE-208ENST00000611174 NBR1Q14596 966 aa6.38□□□□□ -1.39
CENPE-208ENST00000611174 KIF27Q86VH2 1401 aa6.38□□□□□ -1.39
CENPE-208ENST00000611174 CCDC88BA6NC98 1476 aa6.37□□□□□ -1.39
CENPE-208ENST00000611174 MROH2BQ7Z745 1585 aa6.36□□□□□ -1.39
CENPE-208ENST00000611174 BAZ1BQ9UIG0 1483 aaKnown RBP6.36□□□□□ -1.39
CENPE-208ENST00000611174 NEUROD2Q15784 382 aa6.36□□□□□ -1.39
CENPE-208ENST00000611174 CARD11Q9BXL7 1154 aa6.35□□□□□ -1.39
CENPE-208ENST00000611174 CARMIL1Q5VZK9 1371 aa6.35□□□□□ -1.39
CENPE-208ENST00000611174 WDR43Q15061 677 aaKnown RBP eCLIP6.35□□□□□ -1.39
CENPE-208ENST00000611174 TDRD9Q8NDG6 1382 aaKnown RBP6.35□□□□□ -1.39
CENPE-208ENST00000611174 CCNB3Q8WWL7 1395 aa6.35□□□□□ -1.39
CENPE-208ENST00000611174 CEP164Q9UPV0 1460 aa6.35□□□□□ -1.39
CENPE-208ENST00000611174 ARXQ96QS3 562 aa6.34□□□□□ -1.39
CENPE-208ENST00000611174 B4GALNT3Q6L9W6 998 aa6.33□□□□□ -1.4
CENPE-208ENST00000611174 TNNT2P45379 298 aaPredicted RBP6.33□□□□□ -1.4
CENPE-208ENST00000611174 CUX2O14529 1486 aa6.32□□□□□ -1.4
CENPE-208ENST00000611174 ABCC8Q09428 1581 aa6.32□□□□□ -1.4
CENPE-208ENST00000611174 DCAF11Q8TEB1 546 aa6.32□□□□□ -1.4
CENPE-208ENST00000611174 RB1CC1Q8TDY2 1594 aa6.32□□□□□ -1.4
CENPE-208ENST00000611174 PPM1GO15355 546 aaPredicted RBP6.31□□□□□ -1.4
CENPE-208ENST00000611174 CCDC180Q9P1Z9 1646 aa6.31□□□□□ -1.4
CENPE-208ENST00000611174 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.3□□□□□ -1.4
CENPE-208ENST00000611174 RUSC2Q8N2Y8 1516 aa6.3□□□□□ -1.4
CENPE-208ENST00000611174 HSP90AA1P07900 732 aaKnown RBP6.3□□□□□ -1.4
CENPE-208ENST00000611174 CC2D1BQ5T0F9 858 aaKnown RBP6.29□□□□□ -1.4
CENPE-208ENST00000611174 VPS8Q8N3P4 1428 aa6.29□□□□□ -1.4
CENPE-208ENST00000611174 BAZ1AQ9NRL2 1556 aaPredicted RBP6.29□□□□□ -1.4
CENPE-208ENST00000611174 EIF5BO60841 1220 aaKnown RBP6.29□□□□□ -1.4
CENPE-208ENST00000611174 HSPA5P11021 654 aaKnown RBP6.29□□□□□ -1.4
CENPE-208ENST00000611174 PKD2Q13563 968 aa6.29□□□□□ -1.4
CENPE-208ENST00000611174 PPP1R15AO75807 674 aaPredicted RBP6.28□□□□□ -1.4
CENPE-208ENST00000611174 KNSTRNQ9Y448 316 aa6.28□□□□□ -1.4
CENPE-208ENST00000611174 SAFB2Q14151 953 aaKnown RBP eCLIP6.28□□□□□ -1.4
CENPE-208ENST00000611174 NACADO15069 1562 aa6.28□□□□□ -1.4
CENPE-208ENST00000611174 RGS3P49796 1198 aa6.27□□□□□ -1.41
CENPE-208ENST00000611174 L3MBTL2Q969R5 705 aa6.27□□□□□ -1.41
CENPE-208ENST00000611174 RAB3GAP2Q9H2M9 1393 aa6.27□□□□□ -1.41
CENPE-208ENST00000611174 UPF2Q9HAU5 1272 aaKnown RBP6.26□□□□□ -1.41
CENPE-208ENST00000611174 GGT6Q6P531 493 aa6.26□□□□□ -1.41
CENPE-208ENST00000611174 ZBTB7CA1YPR0 619 aa6.26□□□□□ -1.41
CENPE-208ENST00000611174 C14orf37Q86TY3 774 aa6.26□□□□□ -1.41
CENPE-208ENST00000611174 FRAT1Q92837 279 aaPredicted RBP6.26□□□□□ -1.41
CENPE-208ENST00000611174 MLECQ14165 292 aa6.25□□□□□ -1.41
CENPE-208ENST00000611174 MPHOSPH9Q99550 1183 aa6.25□□□□□ -1.41
CENPE-208ENST00000611174 SOX12O15370 315 aa6.24□□□□□ -1.41
CENPE-208ENST00000611174 SETD5Q9C0A6 1442 aa6.23□□□□□ -1.41
CENPE-208ENST00000611174 A0A0G2JS52 829 aa6.23□□□□□ -1.41
CENPE-208ENST00000611174 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
CENPE-208ENST00000611174 TIMELESSQ9UNS1 1208 aa6.23□□□□□ -1.41
CENPE-208ENST00000611174 U2SURPO15042 1029 aaKnown RBP6.23□□□□□ -1.41
CENPE-208ENST00000611174 LAS1LQ9Y4W2 734 aaKnown RBP6.23□□□□□ -1.41
CENPE-208ENST00000611174 RAPGEF2Q9Y4G8 1499 aa6.23□□□□□ -1.41
CENPE-208ENST00000611174 FHAD1B1AJZ9 1412 aa6.23□□□□□ -1.41
CENPE-208ENST00000611174 ARID4BQ4LE39 1312 aaPredicted RBP6.23□□□□□ -1.41
CENPE-208ENST00000611174 FHOD3Q2V2M9 1422 aa6.22□□□□□ -1.41
CENPE-208ENST00000611174 HNRNPMP52272 730 aaKnown RBP eCLIP6.21□□□□□ -1.411e-6■■■□□ 15.2
CENPE-208ENST00000611174 LMOD2Q6P5Q4 547 aa6.21□□□□□ -1.41
CENPE-208ENST00000611174 POGKQ9P215 609 aa6.21□□□□□ -1.41
CENPE-208ENST00000611174 RBM19Q9Y4C8 960 aaKnown RBP6.21□□□□□ -1.41
CENPE-208ENST00000611174 STK26Q9P289 416 aa6.21□□□□□ -1.42
CENPE-208ENST00000611174 NUP155O75694 1391 aa6.21□□□□□ -1.42
CENPE-208ENST00000611174 ANP32EQ9BTT0 268 aa6.2□□□□□ -1.42
CENPE-208ENST00000611174 CDCA8Q53HL2 280 aa6.2□□□□□ -1.42
CENPE-208ENST00000611174 JPH4Q96JJ6 628 aa6.2□□□□□ -1.42
CENPE-208ENST00000611174 CFAP53Q96M91 514 aa6.2□□□□□ -1.42
CENPE-208ENST00000611174 CCER2I3L3R5 266 aa6.19□□□□□ -1.42
CENPE-208ENST00000611174 DHX57Q6P158 1386 aaKnown RBP6.19□□□□□ -1.42
CENPE-208ENST00000611174 TMF1P82094 1093 aa6.19□□□□□ -1.42
CENPE-208ENST00000611174 NUTM2DQ5VT03 806 aaPredicted RBP6.19□□□□□ -1.42
CENPE-208ENST00000611174 CADPSQ9ULU8 1353 aa6.18□□□□□ -1.42
CENPE-208ENST00000611174 ST20-MTHFSA0A0A6YYL1 179 aa6.18□□□□□ -1.42
CENPE-208ENST00000611174 KIF3BO15066 747 aa6.18□□□□□ -1.42
CENPE-208ENST00000611174 EIF4G1Q04637 1599 aaKnown RBP6.18□□□□□ -1.42
CENPE-208ENST00000611174 TSHZ2Q9NRE2 1034 aa6.18□□□□□ -1.42
CENPE-208ENST00000611174 SRPK2P78362 688 aaKnown RBP6.18□□□□□ -1.42
CENPE-208ENST00000611174 RTN4Q9NQC3 1192 aaKnown RBP6.18□□□□□ -1.42
CENPE-208ENST00000611174 ZNF644Q9H582 1327 aaPredicted RBP6.17□□□□□ -1.42
CENPE-208ENST00000611174 ERCC6Q03468 1493 aa6.17□□□□□ -1.42
CENPE-208ENST00000611174 TPRNQ4KMQ1 711 aa6.17□□□□□ -1.42
CENPE-208ENST00000611174 FTSJ3Q8IY81 847 aaKnown RBP6.17□□□□□ -1.42
CENPE-208ENST00000611174 WIZO95785 1651 aa6.16□□□□□ -1.42
CENPE-208ENST00000611174 MAPK8IP3Q9UPT6 1336 aa6.16□□□□□ -1.42
CENPE-208ENST00000611174 EFCAB2Q5VUJ9 269 aa6.16□□□□□ -1.42
CENPE-208ENST00000611174 CLUAP1Q96AJ1 413 aa6.16□□□□□ -1.42
CENPE-208ENST00000611174 NUDCQ9Y266 331 aa6.16□□□□□ -1.42
CENPE-208ENST00000611174 ATAD2BQ9ULI0 1458 aa6.16□□□□□ -1.42
CENPE-208ENST00000611174 NUTM2FA1L443 756 aa6.16□□□□□ -1.42
CENPE-208ENST00000611174 MORC1Q86VD1 984 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms